Result of FASTA (omim) for
pF1KA1373
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1373, 461 aa
1>>>pF1KA1373 461 - 461 aa - 461 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6591+/-0.000469; mu= 6.6830+/- 0.029
mean_var=155.3877+/-31.906, 0's: 0 Z-trim(113.8): 65 B-trim: 0 in 0/52
Lambda= 0.102888
statistics sampled from 23348 (23375) to 23348 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.274), width: 16
Scan time: 6.140
The best scores are: opt bits E(85289)
XP_011538285 (OMIM: 612352) PREDICTED: AMSH-like p ( 436) 2778 424.8 2.3e-118
XP_016871945 (OMIM: 612352) PREDICTED: AMSH-like p ( 436) 2778 424.8 2.3e-118
XP_016871944 (OMIM: 612352) PREDICTED: AMSH-like p ( 436) 2778 424.8 2.3e-118
XP_016871943 (OMIM: 612352) PREDICTED: AMSH-like p ( 436) 2778 424.8 2.3e-118
XP_016871942 (OMIM: 612352) PREDICTED: AMSH-like p ( 436) 2778 424.8 2.3e-118
XP_011538287 (OMIM: 612352) PREDICTED: AMSH-like p ( 436) 2778 424.8 2.3e-118
XP_006717993 (OMIM: 612352) PREDICTED: AMSH-like p ( 436) 2778 424.8 2.3e-118
XP_006717991 (OMIM: 612352) PREDICTED: AMSH-like p ( 436) 2778 424.8 2.3e-118
NP_065850 (OMIM: 612352) AMSH-like protease [Homo ( 436) 2778 424.8 2.3e-118
XP_016871947 (OMIM: 612352) PREDICTED: AMSH-like p ( 330) 2080 321.1 2.9e-87
XP_016871946 (OMIM: 612352) PREDICTED: AMSH-like p ( 390) 1974 305.4 1.8e-82
XP_016858665 (OMIM: 606247,614261) PREDICTED: STAM ( 410) 1573 245.9 1.5e-64
XP_011530786 (OMIM: 606247,614261) PREDICTED: STAM ( 410) 1573 245.9 1.5e-64
NP_006454 (OMIM: 606247,614261) STAM-binding prote ( 424) 1573 245.9 1.6e-64
XP_016858664 (OMIM: 606247,614261) PREDICTED: STAM ( 424) 1573 245.9 1.6e-64
NP_964010 (OMIM: 606247,614261) STAM-binding prote ( 424) 1573 245.9 1.6e-64
XP_005264145 (OMIM: 606247,614261) PREDICTED: STAM ( 424) 1573 245.9 1.6e-64
XP_011530785 (OMIM: 606247,614261) PREDICTED: STAM ( 424) 1573 245.9 1.6e-64
NP_998787 (OMIM: 606247,614261) STAM-binding prote ( 424) 1573 245.9 1.6e-64
XP_011530787 (OMIM: 606247,614261) PREDICTED: STAM ( 336) 1181 187.6 4.3e-47
XP_016858670 (OMIM: 606247,614261) PREDICTED: STAM ( 275) 986 158.6 1.9e-38
XP_016858666 (OMIM: 606247,614261) PREDICTED: STAM ( 289) 986 158.6 2e-38
XP_016858668 (OMIM: 606247,614261) PREDICTED: STAM ( 289) 986 158.6 2e-38
XP_016858669 (OMIM: 606247,614261) PREDICTED: STAM ( 289) 986 158.6 2e-38
XP_016858667 (OMIM: 606247,614261) PREDICTED: STAM ( 289) 986 158.6 2e-38
>>XP_011538285 (OMIM: 612352) PREDICTED: AMSH-like prote (436 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2245.9 bits: 424.8 E(85289): 2.3e-118
Smith-Waterman score: 2778; 99.8% identity (99.8% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KA1 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIC
370 380 390 400 410 420
430 440 450 460
pF1KA1 KFLSGIISGTALEMEPLKIGYGPNGFPLLGISRSSSPSEQL
:
XP_011 KHVLVKDIKIIVLDLR
430
>>XP_016871945 (OMIM: 612352) PREDICTED: AMSH-like prote (436 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2245.9 bits: 424.8 E(85289): 2.3e-118
Smith-Waterman score: 2778; 99.8% identity (99.8% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KA1 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIC
370 380 390 400 410 420
430 440 450 460
pF1KA1 KFLSGIISGTALEMEPLKIGYGPNGFPLLGISRSSSPSEQL
:
XP_016 KHVLVKDIKIIVLDLR
430
>>XP_016871944 (OMIM: 612352) PREDICTED: AMSH-like prote (436 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2245.9 bits: 424.8 E(85289): 2.3e-118
Smith-Waterman score: 2778; 99.8% identity (99.8% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KA1 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIC
370 380 390 400 410 420
430 440 450 460
pF1KA1 KFLSGIISGTALEMEPLKIGYGPNGFPLLGISRSSSPSEQL
:
XP_016 KHVLVKDIKIIVLDLR
430
>>XP_016871943 (OMIM: 612352) PREDICTED: AMSH-like prote (436 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2245.9 bits: 424.8 E(85289): 2.3e-118
Smith-Waterman score: 2778; 99.8% identity (99.8% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KA1 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIC
370 380 390 400 410 420
430 440 450 460
pF1KA1 KFLSGIISGTALEMEPLKIGYGPNGFPLLGISRSSSPSEQL
:
XP_016 KHVLVKDIKIIVLDLR
430
>>XP_016871942 (OMIM: 612352) PREDICTED: AMSH-like prote (436 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2245.9 bits: 424.8 E(85289): 2.3e-118
Smith-Waterman score: 2778; 99.8% identity (99.8% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KA1 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIC
370 380 390 400 410 420
430 440 450 460
pF1KA1 KFLSGIISGTALEMEPLKIGYGPNGFPLLGISRSSSPSEQL
:
XP_016 KHVLVKDIKIIVLDLR
430
>>XP_011538287 (OMIM: 612352) PREDICTED: AMSH-like prote (436 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2245.9 bits: 424.8 E(85289): 2.3e-118
Smith-Waterman score: 2778; 99.8% identity (99.8% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KA1 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIC
370 380 390 400 410 420
430 440 450 460
pF1KA1 KFLSGIISGTALEMEPLKIGYGPNGFPLLGISRSSSPSEQL
:
XP_011 KHVLVKDIKIIVLDLR
430
>>XP_006717993 (OMIM: 612352) PREDICTED: AMSH-like prote (436 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2245.9 bits: 424.8 E(85289): 2.3e-118
Smith-Waterman score: 2778; 99.8% identity (99.8% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KA1 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIC
370 380 390 400 410 420
430 440 450 460
pF1KA1 KFLSGIISGTALEMEPLKIGYGPNGFPLLGISRSSSPSEQL
:
XP_006 KHVLVKDIKIIVLDLR
430
>>XP_006717991 (OMIM: 612352) PREDICTED: AMSH-like prote (436 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2245.9 bits: 424.8 E(85289): 2.3e-118
Smith-Waterman score: 2778; 99.8% identity (99.8% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KA1 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIC
370 380 390 400 410 420
430 440 450 460
pF1KA1 KFLSGIISGTALEMEPLKIGYGPNGFPLLGISRSSSPSEQL
:
XP_006 KHVLVKDIKIIVLDLR
430
>>NP_065850 (OMIM: 612352) AMSH-like protease [Homo sapi (436 aa)
initn: 2778 init1: 2778 opt: 2778 Z-score: 2245.9 bits: 424.8 E(85289): 2.3e-118
Smith-Waterman score: 2778; 99.8% identity (99.8% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KA1 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MDQPFTVNSLKKLAAMPDHTDVSLSPEERVRALSKLGCNITISEDITPRRYFRSGVEMER
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 MASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LKNDLLKKYNVEYQEYLQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 EDQLKKQELARGQMRSQQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 HSPPVNRALTPAATLSAVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQ
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_065 LHTHCSYQLMLPEAIAIVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIC
370 380 390 400 410 420
430 440 450 460
pF1KA1 KFLSGIISGTALEMEPLKIGYGPNGFPLLGISRSSSPSEQL
:
NP_065 KHVLVKDIKIIVLDLR
430
>>XP_016871947 (OMIM: 612352) PREDICTED: AMSH-like prote (330 aa)
initn: 2101 init1: 2080 opt: 2080 Z-score: 1687.7 bits: 321.1 E(85289): 2.9e-87
Smith-Waterman score: 2080; 99.7% identity (99.7% similar) in 315 aa overlap (107-421:1-315)
80 90 100 110 120 130
pF1KA1 LYNKFITLFVEKLPNHRDYQQCAVPEKQDIMKKLKEIAFPRTDELKNDLLKKYNVEYQEY
::::::::::::::::::::::::::::::
XP_016 MKKLKEIAFPRTDELKNDLLKKYNVEYQEY
10 20 30
140 150 160 170 180 190
pF1KA1 LQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFFEDQLKKQELARGQMRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQSKNKYKAEILKKLEHQRLIEAERKRIAQMRQQQLESEQFLFFEDQLKKQELARGQMRS
40 50 60 70 80 90
200 210 220 230 240 250
pF1KA1 QQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYASHSPPVNRALTPAATLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQTSGLSEQIDGSALSCFSTHQNNSLLNVFADQPNKSDATNYASHSPPVNRALTPAATLS
100 110 120 130 140 150
260 270 280 290 300 310
pF1KA1 AVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVQNLVVEGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQ
160 170 180 190 200 210
320 330 340 350 360 370
pF1KA1 SAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIA
220 230 240 250 260 270
380 390 400 410 420 430
pF1KA1 IVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSIQKFLSGIISGTALEMEP
::::::::::::::::::::::::::::::::::::::::::: :
XP_016 IVCSPKHKDTGIFRLTNAGMLEVSACKKKGFHPHTKEPRLFSICKHVLVKDIKIIVLDLR
280 290 300 310 320 330
440 450 460
pF1KA1 LKIGYGPNGFPLLGISRSSSPSEQL
461 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:04:59 2016 done: Wed Nov 2 21:05:00 2016
Total Scan time: 6.140 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]