Result of FASTA (ccds) for
pF1KA1333
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1333, 706 aa
1>>>pF1KA1333 706 - 706 aa - 706 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2566+/-0.000947; mu= 15.5276+/- 0.057
mean_var=89.1096+/-18.388, 0's: 0 Z-trim(106.5): 39 B-trim: 0 in 0/51
Lambda= 0.135866
statistics sampled from 8993 (9024) to 8993 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.644), E-opt: 0.2 (0.277), width: 16
Scan time: 3.110
The best scores are: opt bits E(32554)
CCDS9638.1 G2E3 gene_id:55632|Hs108|chr14 ( 706) 4894 969.8 0
CCDS76669.1 G2E3 gene_id:55632|Hs108|chr14 ( 660) 4551 902.6 0
CCDS2854.1 PHF7 gene_id:51533|Hs108|chr3 ( 381) 920 190.7 3.4e-48
CCDS2855.1 PHF7 gene_id:51533|Hs108|chr3 ( 342) 659 139.5 7.8e-33
CCDS14639.1 PHF6 gene_id:84295|Hs108|chrX ( 365) 295 68.2 2.5e-11
CCDS14640.1 PHF6 gene_id:84295|Hs108|chrX ( 312) 290 67.2 4.3e-11
>>CCDS9638.1 G2E3 gene_id:55632|Hs108|chr14 (706 aa)
initn: 4894 init1: 4894 opt: 4894 Z-score: 5184.5 bits: 969.8 E(32554): 0
Smith-Waterman score: 4894; 100.0% identity (100.0% similar) in 706 aa overlap (1-706:1-706)
10 20 30 40 50 60
pF1KA1 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKEEEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKEEEG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 VYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 VYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNF
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 ASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHRDCLQVQAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 ASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHRDCLQVQAI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 NAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEENAYQELLQHYERCDVRRCRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 NAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEENAYQELLQHYERCDVRRCRC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 KEGRDYNAPDSKWEIKRCQCCGSSGTHLACSSLRSWEQNWECLECRGIIYNSGEFQKAKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 KEGRDYNAPDSKWEIKRCQCCGSSGTHLACSSLRSWEQNWECLECRGIIYNSGEFQKAKK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 HVLPNSNNVGITDCLLEESSPKLPRQSPGSQSKDLLRQGSKFRRNVSTLLIELGFQIKKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 HVLPNSNNVGITDCLLEESSPKLPRQSPGSQSKDLLRQGSKFRRNVSTLLIELGFQIKKK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 TKRLYINKANIWNSALDAFRNRNFNPSYAIEVAYVIENDNFGSEHPGSKQEFLSLLMQHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 TKRLYINKANIWNSALDAFRNRNFNPSYAIEVAYVIENDNFGSEHPGSKQEFLSLLMQHL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 ENSSLFEGSLSKNLSLNSQALKENLYYEAGKMLAISLVHGGPSPGFFSKTLFNCLVYGPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 ENSSLFEGSLSKNLSLNSQALKENLYYEAGKMLAISLVHGGPSPGFFSKTLFNCLVYGPE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 NTQPILDDVSDFDVAQIIIRINTATTVADLKSIINECYNYLELIGCLRLITTLSDKYMLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 NTQPILDDVSDFDVAQIIIRINTATTVADLKSIINECYNYLELIGCLRLITTLSDKYMLV
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 KDILGYHVIQRVHTPFESFKQGLKTLGVLEKIQAYPEAFCSILCHKPESLSAKILSELFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 KDILGYHVIQRVHTPFESFKQGLKTLGVLEKIQAYPEAFCSILCHKPESLSAKILSELFT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 VHTLPDVKALGFWNSYLQAVEDGKSTTTMEDILIFATGCSSIPPAGFKPTPSIECLHVDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 VHTLPDVKALGFWNSYLQAVEDGKSTTTMEDILIFATGCSSIPPAGFKPTPSIECLHVDF
610 620 630 640 650 660
670 680 690 700
pF1KA1 PVGNKCNNCLAIPITNTYKEFQENMDFTIRNTLRLEKEESSHYIGH
::::::::::::::::::::::::::::::::::::::::::::::
CCDS96 PVGNKCNNCLAIPITNTYKEFQENMDFTIRNTLRLEKEESSHYIGH
670 680 690 700
>>CCDS76669.1 G2E3 gene_id:55632|Hs108|chr14 (660 aa)
initn: 4551 init1: 4551 opt: 4551 Z-score: 4821.6 bits: 902.6 E(32554): 0
Smith-Waterman score: 4551; 100.0% identity (100.0% similar) in 660 aa overlap (47-706:1-660)
20 30 40 50 60 70
pF1KA1 CRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKEEEGVYGFLIEDIRKEVNRA
::::::::::::::::::::::::::::::
CCDS76 MSSGIWQRGKEEEGVYGFLIEDIRKEVNRA
10 20 30
80 90 100 110 120 130
pF1KA1 SKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNFASFCWDHRPVQIITSN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNFASFCWDHRPVQIITSN
40 50 60 70 80 90
140 150 160 170 180 190
pF1KA1 NYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHRDCLQVQAINAGVFFFRCTICNNSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 NYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHRDCLQVQAINAGVFFFRCTICNNSD
100 110 120 130 140 150
200 210 220 230 240 250
pF1KA1 IFQKEMLRMGIHIPEKDASWELEENAYQELLQHYERCDVRRCRCKEGRDYNAPDSKWEIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 IFQKEMLRMGIHIPEKDASWELEENAYQELLQHYERCDVRRCRCKEGRDYNAPDSKWEIK
160 170 180 190 200 210
260 270 280 290 300 310
pF1KA1 RCQCCGSSGTHLACSSLRSWEQNWECLECRGIIYNSGEFQKAKKHVLPNSNNVGITDCLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RCQCCGSSGTHLACSSLRSWEQNWECLECRGIIYNSGEFQKAKKHVLPNSNNVGITDCLL
220 230 240 250 260 270
320 330 340 350 360 370
pF1KA1 EESSPKLPRQSPGSQSKDLLRQGSKFRRNVSTLLIELGFQIKKKTKRLYINKANIWNSAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 EESSPKLPRQSPGSQSKDLLRQGSKFRRNVSTLLIELGFQIKKKTKRLYINKANIWNSAL
280 290 300 310 320 330
380 390 400 410 420 430
pF1KA1 DAFRNRNFNPSYAIEVAYVIENDNFGSEHPGSKQEFLSLLMQHLENSSLFEGSLSKNLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 DAFRNRNFNPSYAIEVAYVIENDNFGSEHPGSKQEFLSLLMQHLENSSLFEGSLSKNLSL
340 350 360 370 380 390
440 450 460 470 480 490
pF1KA1 NSQALKENLYYEAGKMLAISLVHGGPSPGFFSKTLFNCLVYGPENTQPILDDVSDFDVAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 NSQALKENLYYEAGKMLAISLVHGGPSPGFFSKTLFNCLVYGPENTQPILDDVSDFDVAQ
400 410 420 430 440 450
500 510 520 530 540 550
pF1KA1 IIIRINTATTVADLKSIINECYNYLELIGCLRLITTLSDKYMLVKDILGYHVIQRVHTPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 IIIRINTATTVADLKSIINECYNYLELIGCLRLITTLSDKYMLVKDILGYHVIQRVHTPF
460 470 480 490 500 510
560 570 580 590 600 610
pF1KA1 ESFKQGLKTLGVLEKIQAYPEAFCSILCHKPESLSAKILSELFTVHTLPDVKALGFWNSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 ESFKQGLKTLGVLEKIQAYPEAFCSILCHKPESLSAKILSELFTVHTLPDVKALGFWNSY
520 530 540 550 560 570
620 630 640 650 660 670
pF1KA1 LQAVEDGKSTTTMEDILIFATGCSSIPPAGFKPTPSIECLHVDFPVGNKCNNCLAIPITN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LQAVEDGKSTTTMEDILIFATGCSSIPPAGFKPTPSIECLHVDFPVGNKCNNCLAIPITN
580 590 600 610 620 630
680 690 700
pF1KA1 TYKEFQENMDFTIRNTLRLEKEESSHYIGH
::::::::::::::::::::::::::::::
CCDS76 TYKEFQENMDFTIRNTLRLEKEESSHYIGH
640 650 660
>>CCDS2854.1 PHF7 gene_id:51533|Hs108|chr3 (381 aa)
initn: 854 init1: 486 opt: 920 Z-score: 978.8 bits: 190.7 E(32554): 3.4e-48
Smith-Waterman score: 920; 41.1% identity (64.0% similar) in 353 aa overlap (1-347:22-365)
10 20 30
pF1KA1 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLT
... :: :.. .: .: .. :.: :: :. :..
CCDS28 MKTVKEKKECQRLRKSAKTRRVTQRKP--SSGPVCWLCLREPGDPEKLGEFLQKD--NIS
10 20 30 40 50
40 50 60 70 80 90
pF1KA1 VHYYCLLMSSGIWQRGKEEEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCK
:::.::..:: . :::. ..: .::: :::.::. :::. : ::::.::.:.: .:
CCDS28 VHYFCLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCL
60 70 80 90 100 110
100 110 120 130 140 150
pF1KA1 RSYHFPCGLQRECIFQFTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNI
:..:.::: .: :. :: :.. ::: :::.: : .. : : .: : . ::
CCDS28 RNFHLPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEE-SCILCCEDLSQQSVENI
120 130 140 150 160 170
160 170 180 190 200 210
pF1KA1 LRSPCCKNAWFHRDCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELE
.::::..: .:: :.: : ... ::.: ::: : .::::::::::..::.::::
CCDS28 -QSPCCSQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIPDRDAAWELE
180 190 200 210 220 230
220 230 240 250 260 270
pF1KA1 ENAYQELLQHYERCDVRRCRCKEGRDYNAPDSKWEIKRCQCCGSSGTHLACSSLRSWEQN
.:...: :.:..::. : ..::: ...: . : ::: ::: :::::: ..
CCDS28 PGAFSDLYQRYQHCDAPICLYEQGRDSFEDEGRWCLILCATCGSHGTHRDCSSLRSNSKK
240 250 260 270 280 290
280 290 300 310 320 330
pF1KA1 WECLECRG------IIYNSGEFQKAKKHVLPNSNNVGITDCLLEESSPKLPRQSPGSQSK
::: :: : :::.. .. :. . : :::. : : . :
CCDS28 WECEECSPAAATDYIPENSGDIPCCSSTFHPEEHFC--RDNTLEEN-PGLSWTDWPEPSL
300 310 320 330 340 350
340 350 360 370 380 390
pF1KA1 DLLRQGSKFRRNVSTLLIELGFQIKKKTKRLYINKANIWNSALDAFRNRNFNPSYAIEVA
..:. ::. :
CCDS28 LEKPESSRGRRSYSWRSKGVRITNSCKKSK
360 370 380
>>CCDS2855.1 PHF7 gene_id:51533|Hs108|chr3 (342 aa)
initn: 580 init1: 382 opt: 659 Z-score: 703.0 bits: 139.5 E(32554): 7.8e-33
Smith-Waterman score: 716; 36.8% identity (55.5% similar) in 353 aa overlap (1-347:22-326)
10 20 30
pF1KA1 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLT
... :: :.. .: .: .. :.: :: :. :..
CCDS28 MKTVKEKKECQRLRKSAKTRRVTQRKP--SSGPVCWLCLREPGDPEKLGEFLQKD--NIS
10 20 30 40 50
40 50 60 70 80 90
pF1KA1 VHYYCLLMSSGIWQRGKEEEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCK
:::.::..:: . :::. ..: .::: :::.::. :::. : ::::.::.:.: .:
CCDS28 VHYFCLILSSKLPQRGQSNRGFHGFLPEDIKKEAARASRKICFVCKKKGAAINCQKDQCL
60 70 80 90 100 110
100 110 120 130 140 150
pF1KA1 RSYHFPCGLQRECIFQFTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNI
:..:.::: .: :. :: :.. ::: :::.: : .. : : .: : . ::
CCDS28 RNFHLPCGQERGCLSQFFGEYKSFCDKHRPTQNIQHGHVGEE-SCILCCEDLSQQSVENI
120 130 140 150 160 170
160 170 180 190 200 210
pF1KA1 LRSPCCKNAWFHRDCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELE
.::::..: .:: :.: : ... ::.: ::: : .::::::::::
CCDS28 -QSPCCSQAIYHRKCIQKYAHTSAKHFFKCPQCNNRKEFPQEMLRMGIHIP---------
180 190 200 210 220
220 230 240 250 260 270
pF1KA1 ENAYQELLQHYERCDVRRCRCKEGRDYNAPDSKWEIKRCQCCGSSGTHLACSSLRSWEQN
: .: . : ::: ::: :::::: ..
CCDS28 ------------------------------DRRWCLILCATCGSHGTHRDCSSLRSNSKK
230 240 250
280 290 300 310 320 330
pF1KA1 WECLECRG------IIYNSGEFQKAKKHVLPNSNNVGITDCLLEESSPKLPRQSPGSQSK
::: :: : :::.. .. :. . : :::. : : . :
CCDS28 WECEECSPAAATDYIPENSGDIPCCSSTFHPEEHFC--RDNTLEEN-PGLSWTDWPEPSL
260 270 280 290 300 310
340 350 360 370 380 390
pF1KA1 DLLRQGSKFRRNVSTLLIELGFQIKKKTKRLYINKANIWNSALDAFRNRNFNPSYAIEVA
..:. ::. :
CCDS28 LEKPESSRGRRSYSWRSKGVRITNSCKKSK
320 330 340
>>CCDS14639.1 PHF6 gene_id:84295|Hs108|chrX (365 aa)
initn: 265 init1: 237 opt: 295 Z-score: 317.0 bits: 68.2 E(32554): 2.5e-11
Smith-Waterman score: 295; 31.4% identity (65.4% similar) in 156 aa overlap (3-153:6-153)
10 20 30 40 50
pF1KA1 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKE
:.: : ... : ::... : .. :. .:. ....:. :.:.::.. . ..
CCDS14 MSSSVEQKKGPTRQRKCGFCKSNRD--KECGQLLISENQKVAAHHKCMLFSSALVSSHSD
10 20 30 40 50
60 70 80 90 100 110
pF1KA1 EEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-----REC
.:.. :: :::..::..:..:: : .:. ::.::: . :.:.::. :.:. ::
CCDS14 NESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KA1 IFQFTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHR
: : . .: :. :..: . .: .. . .::
CCDS14 PSQ--GIYMVYCRKHKK----TAHNSEADLEESFNEHELEPSSPKSKKKSRKGRPRKTNF
120 130 140 150 160 170
180 190 200 210 220 230
pF1KA1 DCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEENAYQELLQHYER
CCDS14 KGLSEDTRSTSSHGTDEMESSSYRDRSPHRSSPSDTRPKCGFCHVGEEENEARGKLHIFN
180 190 200 210 220 230
>>CCDS14640.1 PHF6 gene_id:84295|Hs108|chrX (312 aa)
initn: 299 init1: 237 opt: 290 Z-score: 312.7 bits: 67.2 E(32554): 4.3e-11
Smith-Waterman score: 290; 33.6% identity (67.9% similar) in 131 aa overlap (3-128:6-132)
10 20 30 40 50
pF1KA1 MNESKPGDSQNLACVFCRKHDDCPNKYGEKKTKEKWNLTVHYYCLLMSSGIWQRGKE
:.: : ... : ::... : .. :. .:. ....:. :.:.::.. . ..
CCDS14 MSSSVEQKKGPTRQRKCGFCKSNRD--KECGQLLISENQKVAAHHKCMLFSSALVSSHSD
10 20 30 40 50
60 70 80 90 100 110
pF1KA1 EEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQ-----REC
.:.. :: :::..::..:..:: : .:. ::.::: . :.:.::. :.:. ::
CCDS14 NESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYHCALHDKAQIREK
60 70 80 90 100 110
120 130 140 150 160 170
pF1KA1 IFQFTGNFASFCWDHRPVQIITSNNYRESLPCTICLEFIEPIPSYNILRSPCCKNAWFHR
: : . .: :.
CCDS14 PSQ--GIYMVYCRKHKKTAHNSEAADLEESFNEHELEPSSPKSKKKSRKGRPRKTNFKGL
120 130 140 150 160 170
706 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:00:15 2016 done: Wed Nov 2 21:00:16 2016
Total Scan time: 3.110 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]