Result of FASTA (omim) for
pF1KA1273
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1273, 602 aa
1>>>pF1KA1273 602 - 602 aa - 602 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.1115+/-0.000512; mu= 1.9092+/- 0.032
mean_var=296.5990+/-59.271, 0's: 0 Z-trim(116.6): 125 B-trim: 649 in 2/51
Lambda= 0.074471
statistics sampled from 27817 (27946) to 27817 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.673), E-opt: 0.2 (0.328), width: 16
Scan time: 9.750
The best scores are: opt bits E(85289)
NP_001304167 (OMIM: 612317) ATPase family AAA doma ( 602) 3967 440.7 6.9e-123
XP_011540546 (OMIM: 612317) PREDICTED: ATPase fami ( 696) 3967 440.7 7.6e-123
NP_114127 (OMIM: 612317) ATPase family AAA domain- ( 648) 3652 406.8 1.1e-112
XP_011540545 (OMIM: 612317) PREDICTED: ATPase fami ( 480) 3185 356.5 1.2e-97
NP_060658 (OMIM: 612316) ATPase family AAA domain- ( 634) 3187 356.9 1.2e-97
XP_005244863 (OMIM: 612317) PREDICTED: ATPase fami ( 586) 3043 341.4 5.2e-93
NP_001164007 (OMIM: 612316) ATPase family AAA doma ( 507) 2894 325.3 3.1e-88
NP_001164006 (OMIM: 612316) ATPase family AAA doma ( 586) 2894 325.4 3.4e-88
XP_011540543 (OMIM: 612317) PREDICTED: ATPase fami ( 483) 2214 252.2 3e-66
XP_016857117 (OMIM: 612316) PREDICTED: ATPase fami ( 483) 2125 242.6 2.2e-63
>>NP_001304167 (OMIM: 612317) ATPase family AAA domain-c (602 aa)
initn: 3967 init1: 3967 opt: 3967 Z-score: 2327.2 bits: 440.7 E(85289): 6.9e-123
Smith-Waterman score: 3967; 100.0% identity (100.0% similar) in 602 aa overlap (1-602:1-602)
10 20 30 40 50 60
pF1KA1 MQLEALNLLHTLVWARSLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQLEALNLLHTLVWARSLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 QIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIRAQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 EAMRRATVEREMELRHKNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EAMRRATVEREMELRHKNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RTAGTLFGEGFRAFVTDRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTAGTLFGEGFRAFVTDRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 ETSRITVLEALRHPIQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ETSRITVLEALRHPIQVSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 HILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLFMDEADAFLRKRATEEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 IDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IDVMVHFDLPQQEERERLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMS
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 GREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GREIAQLAVSWQATAYASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 GVQGETLTSWSLATDPSYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVQGETLTSWSLATDPSYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHP
550 560 570 580 590 600
pF1KA1 LL
::
NP_001 LL
>>XP_011540546 (OMIM: 612317) PREDICTED: ATPase family A (696 aa)
initn: 3967 init1: 3967 opt: 3967 Z-score: 2326.4 bits: 440.7 E(85289): 7.6e-123
Smith-Waterman score: 3967; 100.0% identity (100.0% similar) in 602 aa overlap (1-602:95-696)
10 20 30
pF1KA1 MQLEALNLLHTLVWARSLCRAGAVQTQERL
::::::::::::::::::::::::::::::
XP_011 LEHSRYAKEALNLAQMQEQTLQLEQQSKLKMQLEALNLLHTLVWARSLCRAGAVQTQERL
70 80 90 100 110 120
40 50 60 70 80 90
pF1KA1 SGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKL
130 140 150 160 170 180
100 110 120 130 140 150
pF1KA1 ARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRHKNEMLRVETEARAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRHKNEMLRVETEARAR
190 200 210 220 230 240
160 170 180 190 200 210
pF1KA1 AKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVTDRDKVTATVAGLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVTDRDKVTATVAGLTL
250 260 270 280 290 300
220 230 240 250 260 270
pF1KA1 LAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDVLE
310 320 330 340 350 360
280 290 300 310 320 330
pF1KA1 GVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIM
370 380 390 400 410 420
340 350 360 370 380 390
pF1KA1 TGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRATEEISKDLRATLNAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRATEEISKDLRATLNAF
430 440 450 460 470 480
400 410 420 430 440 450
pF1KA1 LYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERLVRLHFDNCVLKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERLVRLHFDNCVLKP
490 500 510 520 530 540
460 470 480 490 500 510
pF1KA1 ATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDA
550 560 570 580 590 600
520 530 540 550 560 570
pF1KA1 CVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDPSYPCLAGPCTFRIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDPSYPCLAGPCTFRIC
610 620 630 640 650 660
580 590 600
pF1KA1 SWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
::::::::::::::::::::::::::::::::
XP_011 SWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
670 680 690
>>NP_114127 (OMIM: 612317) ATPase family AAA domain-cont (648 aa)
initn: 3652 init1: 3652 opt: 3652 Z-score: 2143.9 bits: 406.8 E(85289): 1.1e-112
Smith-Waterman score: 3652; 99.8% identity (100.0% similar) in 556 aa overlap (47-602:93-648)
20 30 40 50 60 70
pF1KA1 SLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEE
:.::::::::::::::::::::::::::::
NP_114 RELEHSRYAKEALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEE
70 80 90 100 110 120
80 90 100 110 120 130
pF1KA1 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
130 140 150 160 170 180
140 150 160 170 180 190
pF1KA1 KNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 KNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVT
190 200 210 220 230 240
200 210 220 230 240 250
pF1KA1 DRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 DRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQ
250 260 270 280 290 300
260 270 280 290 300 310
pF1KA1 VSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 VSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFA
310 320 330 340 350 360
320 330 340 350 360 370
pF1KA1 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRAT
370 380 390 400 410 420
380 390 400 410 420 430
pF1KA1 EEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 EEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERE
430 440 450 460 470 480
440 450 460 470 480 490
pF1KA1 RLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 RLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAY
490 500 510 520 530 540
500 510 520 530 540 550
pF1KA1 ASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 ASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDP
550 560 570 580 590 600
560 570 580 590 600
pF1KA1 SYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
610 620 630 640
>>XP_011540545 (OMIM: 612317) PREDICTED: ATPase family A (480 aa)
initn: 3185 init1: 3185 opt: 3185 Z-score: 1874.3 bits: 356.5 E(85289): 1.2e-97
Smith-Waterman score: 3185; 100.0% identity (100.0% similar) in 480 aa overlap (123-602:1-480)
100 110 120 130 140 150
pF1KA1 QRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRHKNEMLRVETEARARAK
::::::::::::::::::::::::::::::
XP_011 MRRATVEREMELRHKNEMLRVETEARARAK
10 20 30
160 170 180 190 200 210
pF1KA1 AERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVTDRDKVTATVAGLTLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVTDRDKVTATVAGLTLLA
40 50 60 70 80 90
220 230 240 250 260 270
pF1KA1 VGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDVLEGV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDVLEGV
100 110 120 130 140 150
280 290 300 310 320 330
pF1KA1 VLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIMTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIMTG
160 170 180 190 200 210
340 350 360 370 380 390
pF1KA1 GDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRATEEISKDLRATLNAFLY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRATEEISKDLRATLNAFLY
220 230 240 250 260 270
400 410 420 430 440 450
pF1KA1 HMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERLVRLHFDNCVLKPAT
280 290 300 310 320 330
460 470 480 490 500 510
pF1KA1 EGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDACV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDACV
340 350 360 370 380 390
520 530 540 550 560 570
pF1KA1 QDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDPSYPCLAGPCTFRICSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDPSYPCLAGPCTFRICSW
400 410 420 430 440 450
580 590 600
pF1KA1 MGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
::::::::::::::::::::::::::::::
XP_011 MGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
460 470 480
>>NP_060658 (OMIM: 612316) ATPase family AAA domain-cont (634 aa)
initn: 3205 init1: 3179 opt: 3187 Z-score: 1874.0 bits: 356.9 E(85289): 1.2e-97
Smith-Waterman score: 3187; 93.5% identity (97.8% similar) in 536 aa overlap (1-536:95-630)
10 20 30
pF1KA1 MQLEALNLLHTLVWARSLCRAGAVQTQERL
:.::::.:::::::: ::::::::::::::
NP_060 LEHSRYAKDALNLAQMQEQTLQLEQQSKLKMRLEALSLLHTLVWAWSLCRAGAVQTQERL
70 80 90 100 110 120
40 50 60 70 80 90
pF1KA1 SGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEETRQHQARAQYQDKL
130 140 150 160 170 180
100 110 120 130 140 150
pF1KA1 ARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRHKNEMLRVETEARAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::
NP_060 ARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRHKNEMLRVEAEARAR
190 200 210 220 230 240
160 170 180 190 200 210
pF1KA1 AKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVTDRDKVTATVAGLTL
:::::::::::::::::::.::::::::::::::::::::::::::: ::::::::::::
NP_060 AKAERENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTL
250 260 270 280 290 300
220 230 240 250 260 270
pF1KA1 LAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDVLE
:::::::::::: :.::::::::::::::::::::::::::::::::::::::::::.::
NP_060 LAVGVYSAKNATLVAGRFIEARLGKPSLVRETSRITVLEALRHPIQVSRRLLSRPQDALE
310 320 330 340 350 360
280 290 300 310 320 330
pF1KA1 GVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFAKKLALHSGMDYAIM
::::::::::::::::::::::::::.:::.::.::::::::::::::::::::::::::
NP_060 GVVLSPSLEARVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGMDYAIM
370 380 390 400 410 420
340 350 360 370 380 390
pF1KA1 TGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRATEEISKDLRATLNAF
:::::::::::::::::::::::::::::::::.:::::::::::::.::.:::::::::
NP_060 TGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAF
430 440 450 460 470 480
400 410 420 430 440 450
pF1KA1 LYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERERLVRLHFDNCVLKP
::. :::::::::::::: ::::: :::.::. ::::::: :::::::::..::. ::::
NP_060 LYRTGQHSNKFMLVLASNQPEQFDWAINDRINEMVHFDLPGQEERERLVRMYFDKYVLKP
490 500 510 520 530 540
460 470 480 490 500 510
pF1KA1 ATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYASKDGVLTEAMMDA
:::::.::::::::::::::::::::::::::::::::::::::::::.::::::::::.
NP_060 ATEGKQRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAYASEDGVLTEAMMDT
550 560 570 580 590 600
520 530 540 550 560 570
pF1KA1 CVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDPSYPCLAGPCTFRIC
:::::::..::: :::::::::: :
NP_060 RVQDAVQQHQQKMCWLKAEGPGRGDEPSPS
610 620 630
>>XP_005244863 (OMIM: 612317) PREDICTED: ATPase family A (586 aa)
initn: 3034 init1: 3034 opt: 3043 Z-score: 1790.8 bits: 341.4 E(85289): 5.2e-93
Smith-Waterman score: 3043; 97.0% identity (98.2% similar) in 494 aa overlap (47-540:93-586)
20 30 40 50 60 70
pF1KA1 SLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEE
:.::::::::::::::::::::::::::::
XP_005 RELEHSRYAKEALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEE
70 80 90 100 110 120
80 90 100 110 120 130
pF1KA1 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
130 140 150 160 170 180
140 150 160 170 180 190
pF1KA1 KNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVT
190 200 210 220 230 240
200 210 220 230 240 250
pF1KA1 DRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQ
250 260 270 280 290 300
260 270 280 290 300 310
pF1KA1 VSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFA
310 320 330 340 350 360
320 330 340 350 360 370
pF1KA1 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRAT
370 380 390 400 410 420
380 390 400 410 420 430
pF1KA1 EEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERE
430 440 450 460 470 480
440 450 460 470 480 490
pF1KA1 RLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAY
490 500 510 520 530 540
500 510 520 530 540 550
pF1KA1 ASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDP
::.::::::::::. :::::::..: ::::: :: :.: :
XP_005 ASEDGVLTEAMMDTRVQDAVQQHQQMMRWLKRGRPGPEDEQPSS
550 560 570 580
560 570 580 590 600
pF1KA1 SYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
>>NP_001164007 (OMIM: 612316) ATPase family AAA domain-c (507 aa)
initn: 2913 init1: 2887 opt: 2894 Z-score: 1705.0 bits: 325.3 E(85289): 3.1e-88
Smith-Waterman score: 2894; 93.3% identity (97.8% similar) in 490 aa overlap (47-536:14-503)
20 30 40 50 60 70
pF1KA1 SLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEE
:.::::::::::::::::::::::::::::
NP_001 MQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEE
10 20 30 40
80 90 100 110 120 130
pF1KA1 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
50 60 70 80 90 100
140 150 160 170 180 190
pF1KA1 KNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVT
::::::::.::::::::::::::::::::::::.::::::::::::::::::::::::::
NP_001 KNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGFRAFVT
110 120 130 140 150 160
200 210 220 230 240 250
pF1KA1 DRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQ
: :::::::::::::::::::::::: :.:::::::::::::::::::::::::::::::
NP_001 DWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIEARLGKPSLVRETSRITVLEALRHPIQ
170 180 190 200 210 220
260 270 280 290 300 310
pF1KA1 VSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFA
:::::::::::.::::::::::::::::::::::::::::.:::.::.::::::::::::
NP_001 VSRRLLSRPQDALEGVVLSPSLEARVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFA
230 240 250 260 270 280
320 330 340 350 360 370
pF1KA1 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRAT
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
NP_001 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRAT
290 300 310 320 330 340
380 390 400 410 420 430
pF1KA1 EEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERE
:.::.:::::::::::. :::::::::::::: ::::: :::.::. ::::::: :::::
NP_001 EKISEDLRATLNAFLYRTGQHSNKFMLVLASNQPEQFDWAINDRINEMVHFDLPGQEERE
350 360 370 380 390 400
440 450 460 470 480 490
pF1KA1 RLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAY
::::..::. :::::::::.::::::::::::::::::::::::::::::::::::::::
NP_001 RLVRMYFDKYVLKPATEGKQRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAY
410 420 430 440 450 460
500 510 520 530 540 550
pF1KA1 ASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDP
::.::::::::::. :::::::..::: :::::::::: :
NP_001 ASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEGPGRGDEPSPS
470 480 490 500
560 570 580 590 600
pF1KA1 SYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
>>NP_001164006 (OMIM: 612316) ATPase family AAA domain-c (586 aa)
initn: 2913 init1: 2887 opt: 2894 Z-score: 1704.3 bits: 325.4 E(85289): 3.4e-88
Smith-Waterman score: 2894; 93.3% identity (97.8% similar) in 490 aa overlap (47-536:93-582)
20 30 40 50 60 70
pF1KA1 SLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEE
:.::::::::::::::::::::::::::::
NP_001 RELEHSRYAKDALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEE
70 80 90 100 110 120
80 90 100 110 120 130
pF1KA1 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
130 140 150 160 170 180
140 150 160 170 180 190
pF1KA1 KNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVT
::::::::.::::::::::::::::::::::::.::::::::::::::::::::::::::
NP_001 KNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGFRAFVT
190 200 210 220 230 240
200 210 220 230 240 250
pF1KA1 DRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQ
: :::::::::::::::::::::::: :.:::::::::::::::::::::::::::::::
NP_001 DWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIEARLGKPSLVRETSRITVLEALRHPIQ
250 260 270 280 290 300
260 270 280 290 300 310
pF1KA1 VSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFA
:::::::::::.::::::::::::::::::::::::::::.:::.::.::::::::::::
NP_001 VSRRLLSRPQDALEGVVLSPSLEARVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFA
310 320 330 340 350 360
320 330 340 350 360 370
pF1KA1 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRAT
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
NP_001 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRAT
370 380 390 400 410 420
380 390 400 410 420 430
pF1KA1 EEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERE
:.::.:::::::::::. :::::::::::::: ::::: :::.::. ::::::: :::::
NP_001 EKISEDLRATLNAFLYRTGQHSNKFMLVLASNQPEQFDWAINDRINEMVHFDLPGQEERE
430 440 450 460 470 480
440 450 460 470 480 490
pF1KA1 RLVRLHFDNCVLKPATEGKRRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAY
::::..::. :::::::::.::::::::::::::::::::::::::::::::::::::::
NP_001 RLVRMYFDKYVLKPATEGKQRLKLAQFDYGRKCSEVARLTEGMSGREIAQLAVSWQATAY
490 500 510 520 530 540
500 510 520 530 540 550
pF1KA1 ASKDGVLTEAMMDACVQDAVQQYRQKMRWLKAEGPGRGVEHPLSGVQGETLTSWSLATDP
::.::::::::::. :::::::..::: :::::::::: :
NP_001 ASEDGVLTEAMMDTRVQDAVQQHQQKMCWLKAEGPGRGDEPSPS
550 560 570 580
560 570 580 590 600
pF1KA1 SYPCLAGPCTFRICSWMGTGLCPGPLSPRMSCGGGRPFCPPGHPLL
>>XP_011540543 (OMIM: 612317) PREDICTED: ATPase family A (483 aa)
initn: 2214 init1: 2214 opt: 2214 Z-score: 1310.5 bits: 252.2 E(85289): 3e-66
Smith-Waterman score: 2214; 99.7% identity (100.0% similar) in 353 aa overlap (47-399:93-445)
20 30 40 50 60 70
pF1KA1 SLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEE
:.::::::::::::::::::::::::::::
XP_011 RELEHSRYAKEALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEE
70 80 90 100 110 120
80 90 100 110 120 130
pF1KA1 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
130 140 150 160 170 180
140 150 160 170 180 190
pF1KA1 KNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVT
190 200 210 220 230 240
200 210 220 230 240 250
pF1KA1 DRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQ
250 260 270 280 290 300
260 270 280 290 300 310
pF1KA1 VSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFA
310 320 330 340 350 360
320 330 340 350 360 370
pF1KA1 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRAT
370 380 390 400 410 420
380 390 400 410 420 430
pF1KA1 EEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERE
:::::::::::::::::::::::
XP_011 EEISKDLRATLNAFLYHMGQHSNNPSHVSHGGSSPAGRPWLTLQARWAPGSAAAVRRSLE
430 440 450 460 470 480
>>XP_016857117 (OMIM: 612316) PREDICTED: ATPase family A (483 aa)
initn: 2125 init1: 2125 opt: 2125 Z-score: 1258.8 bits: 242.6 E(85289): 2.2e-63
Smith-Waterman score: 2125; 95.8% identity (99.2% similar) in 353 aa overlap (47-399:93-445)
20 30 40 50 60 70
pF1KA1 SLCRAGAVQTQERLSGSASPEQVPAGECCALQEYEAAVEQLKSEQIRAQAEERRKTLSEE
:.::::::::::::::::::::::::::::
XP_016 RELEHSRYAKDALNLAQMQEQTLQLEQQSKLKEYEAAVEQLKSEQIRAQAEERRKTLSEE
70 80 90 100 110 120
80 90 100 110 120 130
pF1KA1 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEAMRRATVEREMELRH
130 140 150 160 170 180
140 150 160 170 180 190
pF1KA1 KNEMLRVETEARARAKAERENADIIREQIRLKASEHRQTVLESIRTAGTLFGEGFRAFVT
::::::::.::::::::::::::::::::::::.::::::::::::::::::::::::::
XP_016 KNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTVLESIRTAGTLFGEGFRAFVT
190 200 210 220 230 240
200 210 220 230 240 250
pF1KA1 DRDKVTATVAGLTLLAVGVYSAKNATAVTGRFIEARLGKPSLVRETSRITVLEALRHPIQ
: :::::::::::::::::::::::: :.:::::::::::::::::::::::::::::::
XP_016 DWDKVTATVAGLTLLAVGVYSAKNATLVAGRFIEARLGKPSLVRETSRITVLEALRHPIQ
250 260 270 280 290 300
260 270 280 290 300 310
pF1KA1 VSRRLLSRPQDVLEGVVLSPSLEARVRDIAIATRNTKKNRGLYRHILLYGPPGTGKTLFA
:::::::::::.::::::::::::::::::::::::::::.:::.::.::::::::::::
XP_016 VSRRLLSRPQDALEGVVLSPSLEARVRDIAIATRNTKKNRSLYRNILMYGPPGTGKTLFA
310 320 330 340 350 360
320 330 340 350 360 370
pF1KA1 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFMDEADAFLRKRAT
:::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::
XP_016 KKLALHSGMDYAIMTGGDVAPMGREGVTAMHKLFDWANTSRRGLLLFVDEADAFLRKRAT
370 380 390 400 410 420
380 390 400 410 420 430
pF1KA1 EEISKDLRATLNAFLYHMGQHSNKFMLVLASNLPEQFDCAINSRIDVMVHFDLPQQEERE
:.::.:::::::::::. :::::
XP_016 EKISEDLRATLNAFLYRTGQHSNNPSHVSHGGSSPAGRPWLTPQARWAPRSAAAGGCSLE
430 440 450 460 470 480
602 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 20:54:07 2016 done: Wed Nov 2 20:54:09 2016
Total Scan time: 9.750 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]