Result of FASTA (omim) for
pF1KA1097
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1097, 911 aa
1>>>pF1KA1097 911 - 911 aa - 911 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5823+/-0.00042; mu= 15.1387+/- 0.026
mean_var=114.5711+/-24.194, 0's: 0 Z-trim(114.9): 257 B-trim: 1693 in 2/52
Lambda= 0.119822
statistics sampled from 24750 (25076) to 24750 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.657), E-opt: 0.2 (0.294), width: 16
Scan time: 13.510
The best scores are: opt bits E(85289)
NP_963918 (OMIM: 615146) ubiquitin carboxyl-termin ( 911) 6229 1088.7 0
NP_055832 (OMIM: 615146) ubiquitin carboxyl-termin ( 942) 6229 1088.7 0
XP_016856211 (OMIM: 615146) PREDICTED: ubiquitin c ( 903) 6145 1074.2 0
XP_005270705 (OMIM: 615146) PREDICTED: ubiquitin c ( 934) 6145 1074.2 0
XP_016856212 (OMIM: 615146) PREDICTED: ubiquitin c ( 820) 5476 958.5 0
XP_005270706 (OMIM: 615146) PREDICTED: ubiquitin c ( 851) 5476 958.5 0
NP_963920 (OMIM: 615146) ubiquitin carboxyl-termin ( 828) 5394 944.3 0
XP_016856213 (OMIM: 615146) PREDICTED: ubiquitin c ( 812) 5392 944.0 0
XP_016856216 (OMIM: 615146) PREDICTED: ubiquitin c ( 763) 5022 880.0 0
XP_016856217 (OMIM: 615146) PREDICTED: ubiquitin c ( 763) 5022 880.0 0
XP_016856218 (OMIM: 615146) PREDICTED: ubiquitin c ( 752) 4368 766.9 0
XP_016856214 (OMIM: 615146) PREDICTED: ubiquitin c ( 812) 4368 766.9 0
XP_011539357 (OMIM: 615146) PREDICTED: ubiquitin c ( 843) 4368 766.9 0
XP_016856215 (OMIM: 615146) PREDICTED: ubiquitin c ( 804) 4355 764.7 0
XP_011539358 (OMIM: 615146) PREDICTED: ubiquitin c ( 600) 3854 678.0 3.7e-194
NP_001103773 (OMIM: 615143) ubiquitin carboxyl-ter ( 914) 3090 546.0 3e-154
XP_011516463 (OMIM: 615143) PREDICTED: ubiquitin c ( 914) 3090 546.0 3e-154
NP_006667 (OMIM: 615143) ubiquitin carboxyl-termin ( 914) 3090 546.0 3e-154
NP_001008563 (OMIM: 615143) ubiquitin carboxyl-ter ( 914) 3090 546.0 3e-154
XP_005251722 (OMIM: 615143) PREDICTED: ubiquitin c ( 914) 3090 546.0 3e-154
XP_011516464 (OMIM: 615143) PREDICTED: ubiquitin c ( 914) 3090 546.0 3e-154
XP_016869710 (OMIM: 615143) PREDICTED: ubiquitin c ( 675) 2645 469.0 3.4e-131
XP_005251723 (OMIM: 615143) PREDICTED: ubiquitin c ( 675) 2645 469.0 3.4e-131
XP_016878257 (OMIM: 604728) PREDICTED: ubiquitin c ( 351) 429 85.8 4.2e-16
XP_016878255 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 429 85.8 4.9e-16
XP_016878256 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 429 85.8 4.9e-16
NP_001243631 (OMIM: 604728) ubiquitin carboxyl-ter ( 476) 429 85.9 5.3e-16
XP_016878252 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 429 85.9 5.5e-16
XP_016878254 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 429 85.9 5.5e-16
XP_016878253 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 429 85.9 5.5e-16
NP_006528 (OMIM: 604728) ubiquitin carboxyl-termin ( 520) 429 85.9 5.7e-16
XP_016874028 (OMIM: 604725) PREDICTED: ubiquitin c ( 352) 416 83.5 2e-15
NP_001230688 (OMIM: 604725) ubiquitin carboxyl-ter ( 362) 416 83.5 2e-15
NP_741994 (OMIM: 604725) ubiquitin carboxyl-termin ( 396) 416 83.5 2.2e-15
XP_005271778 (OMIM: 604725) PREDICTED: ubiquitin c ( 605) 416 83.7 3e-15
NP_004196 (OMIM: 604725) ubiquitin carboxyl-termin ( 605) 416 83.7 3e-15
XP_005271779 (OMIM: 604725) PREDICTED: ubiquitin c ( 605) 416 83.7 3e-15
XP_016878211 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 402 81.4 2.3e-14
XP_016878210 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 402 81.4 2.3e-14
NP_001269978 (OMIM: 603158) ubiquitin carboxyl-ter (1012) 402 81.4 2.4e-14
XP_016878208 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 402 81.4 2.6e-14
XP_016878207 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 402 81.4 2.6e-14
XP_016878209 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 402 81.4 2.6e-14
XP_006720825 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 402 81.4 2.6e-14
XP_011520495 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 402 81.4 2.6e-14
NP_005145 (OMIM: 603158) ubiquitin carboxyl-termin (1118) 402 81.4 2.6e-14
XP_006720824 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 402 81.4 2.6e-14
NP_001122082 (OMIM: 603158) ubiquitin carboxyl-ter (1118) 402 81.4 2.6e-14
NP_955475 (OMIM: 603486) ubiquitin carboxyl-termin ( 916) 384 78.3 1.9e-13
NP_003354 (OMIM: 603486) ubiquitin carboxyl-termin ( 963) 384 78.3 2e-13
>>NP_963918 (OMIM: 615146) ubiquitin carboxyl-terminal h (911 aa)
initn: 6229 init1: 6229 opt: 6229 Z-score: 5822.9 bits: 1088.7 E(85289): 0
Smith-Waterman score: 6229; 99.9% identity (100.0% similar) in 911 aa overlap (1-911:1-911)
10 20 30 40 50 60
pF1KA1 MSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 MSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 STIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 IPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 IPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 FFLDCGGLARTDKKPAICKSYLKLMTELWYKSRPGSVVPTTLFQGIKTVNPTFRGYSQQD
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
NP_963 FFLDCGGLARTDKKPAICKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 AQEFLRCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 AQEFLRCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 NENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 NENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISET
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 VDLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 VDLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 PPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 PPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 KEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 KEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 CLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKIST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 CLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKIST
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 HVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 HVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 TFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 TFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICH
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 TCQIEAEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 TCQIEAEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPG
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 PIDNTKIAVTKCGNVMLRQGADSGQISEETWNFLQSIYGGGPEVILRPPVVHVDPDILQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 PIDNTKIAVTKCGNVMLRQGADSGQISEETWNFLQSIYGGGPEVILRPPVVHVDPDILQA
850 860 870 880 890 900
910
pF1KA1 EEKIEVETRSL
:::::::::::
NP_963 EEKIEVETRSL
910
>>NP_055832 (OMIM: 615146) ubiquitin carboxyl-terminal h (942 aa)
initn: 6229 init1: 6229 opt: 6229 Z-score: 5822.7 bits: 1088.7 E(85289): 0
Smith-Waterman score: 6229; 99.9% identity (100.0% similar) in 911 aa overlap (1-911:32-942)
10 20 30
pF1KA1 MSAFRNHCPHLDSVGEITKEDLIQKSLGTC
::::::::::::::::::::::::::::::
NP_055 TGSNSHITILTLKVLPHFESLGKQEKIPNKMSAFRNHCPHLDSVGEITKEDLIQKSLGTC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA1 QDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA1 FLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELRA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA1 RGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_055 RGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA1 KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTI
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA1 TTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQDDENNSEMSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQDDENNSEMSK
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA1 DWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYITDVHSNDLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYITDVHSNDLS
370 380 390 400 410 420
400 410 420 430 440 450
pF1KA1 TPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYRSVISDIFDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYRSVISDIFDG
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA1 TIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQG
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA1 WIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 WIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVK
550 560 570 580 590 600
580 590 600 610 620 630
pF1KA1 FCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLS
610 620 630 640 650 660
640 650 660 670 680 690
pF1KA1 VICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQK
670 680 690 700 710 720
700 710 720 730 740 750
pF1KA1 ERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIED
730 740 750 760 770 780
760 770 780 790 800 810
pF1KA1 LVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRLNRAFQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRLNRAFQKE
790 800 810 820 830 840
820 830 840 850 860 870
pF1KA1 DSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISEET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISEET
850 860 870 880 890 900
880 890 900 910
pF1KA1 WNFLQSIYGGGPEVILRPPVVHVDPDILQAEEKIEVETRSL
:::::::::::::::::::::::::::::::::::::::::
NP_055 WNFLQSIYGGGPEVILRPPVVHVDPDILQAEEKIEVETRSL
910 920 930 940
>>XP_016856211 (OMIM: 615146) PREDICTED: ubiquitin carbo (903 aa)
initn: 3558 init1: 3526 opt: 6145 Z-score: 5744.5 bits: 1074.2 E(85289): 0
Smith-Waterman score: 6145; 99.0% identity (99.1% similar) in 911 aa overlap (1-911:1-903)
10 20 30 40 50 60
pF1KA1 MSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 IPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 FFLDCGGLARTDKKPAICKSYLKLMTELWYKSRPGSVVPTTLFQGIKTVNPTFRGYSQQD
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_016 FFLDCGGLARTDKKPAICKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 AQEFLRCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQEFLRCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 NENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISET
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 VDLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 PPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 KEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQD
:::::::::::::::::::::::::::::::::::::::: ::::::::::::
XP_016 KEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVK--------SWFWGPVVTLQD
490 500 510 520 530
550 560 570 580 590 600
pF1KA1 CLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKIST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKIST
540 550 560 570 580 590
610 620 630 640 650 660
pF1KA1 HVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDD
600 610 620 630 640 650
670 680 690 700 710 720
pF1KA1 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFK
660 670 680 690 700 710
730 740 750 760 770 780
pF1KA1 TFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICH
720 730 740 750 760 770
790 800 810 820 830 840
pF1KA1 TCQIEAEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TCQIEAEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPG
780 790 800 810 820 830
850 860 870 880 890 900
pF1KA1 PIDNTKIAVTKCGNVMLRQGADSGQISEETWNFLQSIYGGGPEVILRPPVVHVDPDILQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PIDNTKIAVTKCGNVMLRQGADSGQISEETWNFLQSIYGGGPEVILRPPVVHVDPDILQA
840 850 860 870 880 890
910
pF1KA1 EEKIEVETRSL
:::::::::::
XP_016 EEKIEVETRSL
900
>>XP_005270705 (OMIM: 615146) PREDICTED: ubiquitin carbo (934 aa)
initn: 3558 init1: 3526 opt: 6145 Z-score: 5744.3 bits: 1074.2 E(85289): 0
Smith-Waterman score: 6145; 99.0% identity (99.1% similar) in 911 aa overlap (1-911:32-934)
10 20 30
pF1KA1 MSAFRNHCPHLDSVGEITKEDLIQKSLGTC
::::::::::::::::::::::::::::::
XP_005 TGSNSHITILTLKVLPHFESLGKQEKIPNKMSAFRNHCPHLDSVGEITKEDLIQKSLGTC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA1 QDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA1 FLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELRA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA1 RGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_005 RGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA1 KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTI
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA1 TTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQDDENNSEMSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQDDENNSEMSK
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA1 DWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYITDVHSNDLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYITDVHSNDLS
370 380 390 400 410 420
400 410 420 430 440 450
pF1KA1 TPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYRSVISDIFDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYRSVISDIFDG
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA1 TIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQG
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA1 WIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVK
:::::::::: ::::::::::::::::::::::::::::::::::::::::::
XP_005 WIAFFMEYVK--------SWFWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVK
550 560 570 580 590
580 590 600 610 620 630
pF1KA1 FCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLS
600 610 620 630 640 650
640 650 660 670 680 690
pF1KA1 VICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQK
660 670 680 690 700 710
700 710 720 730 740 750
pF1KA1 ERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIED
720 730 740 750 760 770
760 770 780 790 800 810
pF1KA1 LVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRLNRAFQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRLNRAFQKE
780 790 800 810 820 830
820 830 840 850 860 870
pF1KA1 DSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISEET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISEET
840 850 860 870 880 890
880 890 900 910
pF1KA1 WNFLQSIYGGGPEVILRPPVVHVDPDILQAEEKIEVETRSL
:::::::::::::::::::::::::::::::::::::::::
XP_005 WNFLQSIYGGGPEVILRPPVVHVDPDILQAEEKIEVETRSL
900 910 920 930
>>XP_016856212 (OMIM: 615146) PREDICTED: ubiquitin carbo (820 aa)
initn: 5476 init1: 5476 opt: 5476 Z-score: 5120.1 bits: 958.5 E(85289): 0
Smith-Waterman score: 5476; 99.8% identity (100.0% similar) in 803 aa overlap (1-803:1-803)
10 20 30 40 50 60
pF1KA1 MSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 IPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 FFLDCGGLARTDKKPAICKSYLKLMTELWYKSRPGSVVPTTLFQGIKTVNPTFRGYSQQD
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_016 FFLDCGGLARTDKKPAICKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 AQEFLRCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQEFLRCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 NENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISET
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 VDLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 PPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 KEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 CLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKIST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKIST
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 HVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 TFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICH
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 TCQIEAEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPG
::::::::::::::::::::::.
XP_016 TCQIEAEKIEKRRKTELEIFIRILQVLLTILRLQSLNVVM
790 800 810 820
>>XP_005270706 (OMIM: 615146) PREDICTED: ubiquitin carbo (851 aa)
initn: 5476 init1: 5476 opt: 5476 Z-score: 5119.9 bits: 958.5 E(85289): 0
Smith-Waterman score: 5476; 99.8% identity (100.0% similar) in 803 aa overlap (1-803:32-834)
10 20 30
pF1KA1 MSAFRNHCPHLDSVGEITKEDLIQKSLGTC
::::::::::::::::::::::::::::::
XP_005 TGSNSHITILTLKVLPHFESLGKQEKIPNKMSAFRNHCPHLDSVGEITKEDLIQKSLGTC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA1 QDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA1 FLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELRA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA1 RGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_005 RGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA1 KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTI
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA1 TTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQDDENNSEMSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQDDENNSEMSK
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA1 DWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYITDVHSNDLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYITDVHSNDLS
370 380 390 400 410 420
400 410 420 430 440 450
pF1KA1 TPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYRSVISDIFDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYRSVISDIFDG
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA1 TIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQG
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA1 WIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 WIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVK
550 560 570 580 590 600
580 590 600 610 620 630
pF1KA1 FCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLS
610 620 630 640 650 660
640 650 660 670 680 690
pF1KA1 VICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQK
670 680 690 700 710 720
700 710 720 730 740 750
pF1KA1 ERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIED
730 740 750 760 770 780
760 770 780 790 800 810
pF1KA1 LVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRLNRAFQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_005 LVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRILQVLLTI
790 800 810 820 830 840
820 830 840 850 860 870
pF1KA1 DSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISEET
XP_005 LRLQSLNVVM
850
>>NP_963920 (OMIM: 615146) ubiquitin carboxyl-terminal h (828 aa)
initn: 5406 init1: 3526 opt: 5394 Z-score: 5043.4 bits: 944.3 E(85289): 0
Smith-Waterman score: 5394; 98.5% identity (99.0% similar) in 805 aa overlap (1-805:32-828)
10 20 30
pF1KA1 MSAFRNHCPHLDSVGEITKEDLIQKSLGTC
::::::::::::::::::::::::::::::
NP_963 TGSNSHITILTLKVLPHFESLGKQEKIPNKMSAFRNHCPHLDSVGEITKEDLIQKSLGTC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA1 QDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 QDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEV
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA1 FLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 FLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELRA
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA1 RGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWY
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
NP_963 RGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA1 KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQTI
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA1 TTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQDDENNSEMSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 TTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQDDENNSEMSK
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA1 DWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYITDVHSNDLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 DWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYITDVHSNDLS
370 380 390 400 410 420
400 410 420 430 440 450
pF1KA1 TPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYRSVISDIFDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 TPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYRSVISDIFDG
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA1 TIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 TIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQG
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA1 WIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVK
:::::::::: ::::::::::::::::::::::::::::::::::::::::::
NP_963 WIAFFMEYVK--------SWFWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVK
550 560 570 580 590
580 590 600 610 620 630
pF1KA1 FCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 FCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLS
600 610 620 630 640 650
640 650 660 670 680 690
pF1KA1 VICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 VICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQK
660 670 680 690 700 710
700 710 720 730 740 750
pF1KA1 ERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 ERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIED
720 730 740 750 760 770
760 770 780 790 800 810
pF1KA1 LVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRLNRAFQKE
::::::::::::::::::::::::::::::::::::::::::::::::::::...
NP_963 LVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRVKK
780 790 800 810 820
820 830 840 850 860 870
pF1KA1 DSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGADSGQISEET
>>XP_016856213 (OMIM: 615146) PREDICTED: ubiquitin carbo (812 aa)
initn: 5404 init1: 3526 opt: 5392 Z-score: 5041.7 bits: 944.0 E(85289): 0
Smith-Waterman score: 5392; 98.8% identity (99.0% similar) in 803 aa overlap (1-803:1-795)
10 20 30 40 50 60
pF1KA1 MSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 STIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 IPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 FFLDCGGLARTDKKPAICKSYLKLMTELWYKSRPGSVVPTTLFQGIKTVNPTFRGYSQQD
:::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::
XP_016 FFLDCGGLARTDKKPAICKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 AQEFLRCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQEFLRCLMDLLHEELKEQVMEVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 NENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISET
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 VDLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VDLNNQETVKVQIHSRASEYITDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 PPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PPHKKAQSASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 KEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQD
:::::::::::::::::::::::::::::::::::::::: ::::::::::::
XP_016 KEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVK--------SWFWGPVVTLQD
490 500 510 520 530
550 560 570 580 590 600
pF1KA1 CLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKIST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKIST
540 550 560 570 580 590
610 620 630 640 650 660
pF1KA1 HVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDD
600 610 620 630 640 650
670 680 690 700 710 720
pF1KA1 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFK
660 670 680 690 700 710
730 740 750 760 770 780
pF1KA1 TFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICH
720 730 740 750 760 770
790 800 810 820 830 840
pF1KA1 TCQIEAEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPG
::::::::::::::::::::::.
XP_016 TCQIEAEKIEKRRKTELEIFIRILQVLLTILRLQSLNVVM
780 790 800 810
>>XP_016856216 (OMIM: 615146) PREDICTED: ubiquitin carbo (763 aa)
initn: 5022 init1: 5022 opt: 5022 Z-score: 4696.4 bits: 880.0 E(85289): 0
Smith-Waterman score: 5022; 99.3% identity (99.9% similar) in 740 aa overlap (172-911:24-763)
150 160 170 180 190 200
pF1KA1 ADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSY
... ::::::::::::::::::::::::::
XP_016 MQLCRLFLIDKKTRHRSLNNFADITSYPPLTQFFLDCGGLARTDKKPAICKSY
10 20 30 40 50
210 220 230 240 250 260
pF1KA1 LKLMTELWYKSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVM
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKLMTELWHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVM
60 70 80 90 100 110
270 280 290 300 310 320
pF1KA1 EVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQD
120 130 140 150 160 170
330 340 350 360 370 380
pF1KA1 DENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYI
180 190 200 210 220 230
390 400 410 420 430 440
pF1KA1 TDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYR
240 250 260 270 280 290
450 460 470 480 490 500
pF1KA1 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGS
300 310 320 330 340 350
510 520 530 540 550 560
pF1KA1 CGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEK
360 370 380 390 400 410
570 580 590 600 610 620
pF1KA1 CKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPA
420 430 440 450 460 470
630 640 650 660 670 680
pF1KA1 QIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFY
480 490 500 510 520 530
690 700 710 720 730 740
pF1KA1 RKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVP
540 550 560 570 580 590
750 760 770 780 790 800
pF1KA1 PRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFI
600 610 620 630 640 650
810 820 830 840 850 860
pF1KA1 RLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGA
660 670 680 690 700 710
870 880 890 900 910
pF1KA1 DSGQISEETWNFLQSIYGGGPEVILRPPVVHVDPDILQAEEKIEVETRSL
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSGQISEETWNFLQSIYGGGPEVILRPPVVHVDPDILQAEEKIEVETRSL
720 730 740 750 760
>>XP_016856217 (OMIM: 615146) PREDICTED: ubiquitin carbo (763 aa)
initn: 5022 init1: 5022 opt: 5022 Z-score: 4696.4 bits: 880.0 E(85289): 0
Smith-Waterman score: 5022; 99.3% identity (99.9% similar) in 740 aa overlap (172-911:24-763)
150 160 170 180 190 200
pF1KA1 ADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSY
... ::::::::::::::::::::::::::
XP_016 MQLCRLFLIDKKTRHRSLNNFADITSYPPLTQFFLDCGGLARTDKKPAICKSY
10 20 30 40 50
210 220 230 240 250 260
pF1KA1 LKLMTELWYKSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVM
::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LKLMTELWHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVM
60 70 80 90 100 110
270 280 290 300 310 320
pF1KA1 EVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EVEEDPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQD
120 130 140 150 160 170
330 340 350 360 370 380
pF1KA1 DENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DENNSEMSKDWQKEKMCNKINKVNSEGEFDKDRDSISETVDLNNQETVKVQIHSRASEYI
180 190 200 210 220 230
390 400 410 420 430 440
pF1KA1 TDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TDVHSNDLSTPQILPSNEGVNPRLSASPPKSGNLWPGLAPPHKKAQSASPKRKKQHKKYR
240 250 260 270 280 290
450 460 470 480 490 500
pF1KA1 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGS
300 310 320 330 340 350
510 520 530 540 550 560
pF1KA1 CGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEK
360 370 380 390 400 410
570 580 590 600 610 620
pF1KA1 CKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPA
420 430 440 450 460 470
630 640 650 660 670 680
pF1KA1 QIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFY
480 490 500 510 520 530
690 700 710 720 730 740
pF1KA1 RKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVP
540 550 560 570 580 590
750 760 770 780 790 800
pF1KA1 PRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFI
600 610 620 630 640 650
810 820 830 840 850 860
pF1KA1 RLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTKCGNVMLRQGA
660 670 680 690 700 710
870 880 890 900 910
pF1KA1 DSGQISEETWNFLQSIYGGGPEVILRPPVVHVDPDILQAEEKIEVETRSL
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DSGQISEETWNFLQSIYGGGPEVILRPPVVHVDPDILQAEEKIEVETRSL
720 730 740 750 760
911 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:42:46 2016 done: Thu Nov 3 10:42:48 2016
Total Scan time: 13.510 Total Display time: 0.280
Function used was FASTA [36.3.4 Apr, 2011]