Result of FASTA (ccds) for
pF1KA1009
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1009, 1327 aa
1>>>pF1KA1009 1327 - 1327 aa - 1327 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.3463+/-0.00178; mu= -13.9855+/- 0.104
mean_var=466.4093+/-101.296, 0's: 0 Z-trim(106.4): 141 B-trim: 0 in 0/53
Lambda= 0.059387
statistics sampled from 8870 (8967) to 8870 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.581), E-opt: 0.2 (0.275), width: 16
Scan time: 5.540
The best scores are: opt bits E(32554)
CCDS69149.1 CEP162 gene_id:22832|Hs108|chr6 (1327) 8381 734.5 4.6e-211
CCDS34494.2 CEP162 gene_id:22832|Hs108|chr6 (1403) 8381 734.5 4.8e-211
>>CCDS69149.1 CEP162 gene_id:22832|Hs108|chr6 (1327 aa)
initn: 8381 init1: 8381 opt: 8381 Z-score: 3902.8 bits: 734.5 E(32554): 4.6e-211
Smith-Waterman score: 8381; 99.9% identity (99.9% similar) in 1327 aa overlap (1-1327:1-1327)
10 20 30 40 50 60
pF1KA1 MEIEEESAEKIQFLKSSGTSLLSTDSLETNELVVSELNHSSLGVGLDTLEEQEEKEQFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 MEIEEESAEKIQFLKSSGTSLLSTDSLETNELVVSELNHSSLGVGLDTLEEQEEKEQFFA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 RLEKGLTSSIDYSRLNKELDSNDSTHFKALHINQANAELTDDEHENESKHEELAENYSDD
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::
CCDS69 RLEKGLTSSIDYSRLNKELDSNDSTHFKALHSNQANAELTDDEHENESKHEELAENYSDD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 FEDEYVGAPLTTKDEEMPSKENSKSEKISVPKQEEEKTGMLANVVLLDSLDSVAEVNLDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 FEDEYVGAPLTTKDEEMPSKENSKSEKISVPKQEEEKTGMLANVVLLDSLDSVAEVNLDE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 QDKITPKPRCLPEMTENEMTGTGVSYGQSSSDVEALHQAYCHIAHSLGDEDKQKIESNTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 QDKITPKPRCLPEMTENEMTGTGVSYGQSSSDVEALHQAYCHIAHSLGDEDKQKIESNTV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 EDIKSSVKGHPQENEENSKNISTMESDLPTVEELMKPIRIDSFGISGFDLQPVSSEKVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 EDIKSSVKGHPQENEENSKNISTMESDLPTVEELMKPIRIDSFGISGFDLQPVSSEKVAE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA1 RKETEFFSSLPLKMNPNILSQDSQHVNLFFDKNDENVILQKTTNESMENSCPQVTEVTAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 RKETEFFSSLPLKMNPNILSQDSQHVNLFFDKNDENVILQKTTNESMENSCPQVTEVTAT
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA1 EEHVDKMYLNILRKKITVNSSSLSQDDKINKTYRSQLSSEEEGAVMGKQVPYKKARSAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 EEHVDKMYLNILRKKITVNSSSLSQDDKINKTYRSQLSSEEEGAVMGKQVPYKKARSAPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA1 LLKRKPQSGLYASVRSSGYGKPSSPLKMFSTLEKKTSEDIIKSKNLRSISTSNQPRKKEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 LLKRKPQSGLYASVRSSGYGKPSSPLKMFSTLEKKTSEDIIKSKNLRSISTSNQPRKKEI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA1 LSGTKLIKPAALDKPAHKTESCLSTRKKSENPTETDSCIQFQTDSLGYCGENKEKKLLMF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 LSGTKLIKPAALDKPAHKTESCLSTRKKSENPTETDSCIQFQTDSLGYCGENKEKKLLMF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA1 KRVQEAEDKWRGAQALIEQIKATFSEKEKELENKLEELKKQQEKELFKLNQDNYILQAKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 KRVQEAEDKWRGAQALIEQIKATFSEKEKELENKLEELKKQQEKELFKLNQDNYILQAKL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA1 SSFEETNKKQRWLHFGEAADPVTGEKLKQIQKEIQEQETLLQGYQQENERLYNQVKDLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 SSFEETNKKQRWLHFGEAADPVTGEKLKQIQKEIQEQETLLQGYQQENERLYNQVKDLQE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA1 QNKKNEERMFKENQSLFSEVASLKEQMHKSRFLSQVVEDSEPTRNQNFTDLLAELRMAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 QNKKNEERMFKENQSLFSEVASLKEQMHKSRFLSQVVEDSEPTRNQNFTDLLAELRMAQK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA1 EKDSLLEDIKRLKQDKQALEVDFEKMKKERDQAKDQIAYVTGEKLYEIKILEETHKQEIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 EKDSLLEDIKRLKQDKQALEVDFEKMKKERDQAKDQIAYVTGEKLYEIKILEETHKQEIS
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA1 RLQKRLQWYAENQELLDKDALRLREANEEIEKLKLEIEKLKAESGNPSIRQKIRLKDKAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 RLQKRLQWYAENQELLDKDALRLREANEEIEKLKLEIEKLKAESGNPSIRQKIRLKDKAA
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA1 DAKKIQDLERQVKEMEGILKRRYPNSLPALILAASAAGDTVDKNTVEFMEKRIKKLEADL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 DAKKIQDLERQVKEMEGILKRRYPNSLPALILAASAAGDTVDKNTVEFMEKRIKKLEADL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA1 EGKDEDAKKSLRTMEQQFQKMKIQYEQRLEQQEQLLACKLNQHDSPRIKALEKELDDIKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 EGKDEDAKKSLRTMEQQFQKMKIQYEQRLEQQEQLLACKLNQHDSPRIKALEKELDDIKE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA1 AHQITVRNLEAEIDVLKHQNAELDVKKNDKDDEDFQSIEFQVEQAHAKAKLVRLNEELAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 AHQITVRNLEAEIDVLKHQNAELDVKKNDKDDEDFQSIEFQVEQAHAKAKLVRLNEELAA
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA1 KKREIQDLSKTVERLQKDRRMMLSNQNSKGREEMSAKRAKKDVLHSSKGNANSFPGTLDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 KKREIQDLSKTVERLQKDRRMMLSNQNSKGREEMSAKRAKKDVLHSSKGNANSFPGTLDS
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA1 KLYQPHTFTDSHVSEVLQENYRLKNELEGLISEKNELKMKSEAVMNQFENSMRRVKEDTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 KLYQPHTFTDSHVSEVLQENYRLKNELEGLISEKNELKMKSEAVMNQFENSMRRVKEDTA
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA1 AHIASLKASHQREIEKLLCQNAVENSSSKVAELNRKIATQEVLIRHFQSQVNELQSKQES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 AHIASLKASHQREIEKLLCQNAVENSSSKVAELNRKIATQEVLIRHFQSQVNELQSKQES
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA1 LVVSEVREEILQKEITKLLEELREAKENHTPEMKHFVGLEKKIKQMEMRHAQREQELQQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 LVVSEVREEILQKEITKLLEELREAKENHTPEMKHFVGLEKKIKQMEMRHAQREQELQQI
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA1 IQQTHQVVETEQNKEVEKWKRLAQLKNRELEKFRTELDSILDVLRELHRQGVVVPVAFAD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 IQQTHQVVETEQNKEVEKWKRLAQLKNRELEKFRTELDSILDVLRELHRQGVVVPVAFAD
1270 1280 1290 1300 1310 1320
pF1KA1 EMNAPEY
:::::::
CCDS69 EMNAPEY
>>CCDS34494.2 CEP162 gene_id:22832|Hs108|chr6 (1403 aa)
initn: 8381 init1: 8381 opt: 8381 Z-score: 3902.5 bits: 734.5 E(32554): 4.8e-211
Smith-Waterman score: 8381; 99.9% identity (99.9% similar) in 1327 aa overlap (1-1327:77-1403)
10 20 30
pF1KA1 MEIEEESAEKIQFLKSSGTSLLSTDSLETN
::::::::::::::::::::::::::::::
CCDS34 WWITEDDFKDDGLLGTNVSYLKTKKTSQPVMEIEEESAEKIQFLKSSGTSLLSTDSLETN
50 60 70 80 90 100
40 50 60 70 80 90
pF1KA1 ELVVSELNHSSLGVGLDTLEEQEEKEQFFARLEKGLTSSIDYSRLNKELDSNDSTHFKAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ELVVSELNHSSLGVGLDTLEEQEEKEQFFARLEKGLTSSIDYSRLNKELDSNDSTHFKAL
110 120 130 140 150 160
100 110 120 130 140 150
pF1KA1 HINQANAELTDDEHENESKHEELAENYSDDFEDEYVGAPLTTKDEEMPSKENSKSEKISV
: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 HSNQANAELTDDEHENESKHEELAENYSDDFEDEYVGAPLTTKDEEMPSKENSKSEKISV
170 180 190 200 210 220
160 170 180 190 200 210
pF1KA1 PKQEEEKTGMLANVVLLDSLDSVAEVNLDEQDKITPKPRCLPEMTENEMTGTGVSYGQSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PKQEEEKTGMLANVVLLDSLDSVAEVNLDEQDKITPKPRCLPEMTENEMTGTGVSYGQSS
230 240 250 260 270 280
220 230 240 250 260 270
pF1KA1 SDVEALHQAYCHIAHSLGDEDKQKIESNTVEDIKSSVKGHPQENEENSKNISTMESDLPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SDVEALHQAYCHIAHSLGDEDKQKIESNTVEDIKSSVKGHPQENEENSKNISTMESDLPT
290 300 310 320 330 340
280 290 300 310 320 330
pF1KA1 VEELMKPIRIDSFGISGFDLQPVSSEKVAERKETEFFSSLPLKMNPNILSQDSQHVNLFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 VEELMKPIRIDSFGISGFDLQPVSSEKVAERKETEFFSSLPLKMNPNILSQDSQHVNLFF
350 360 370 380 390 400
340 350 360 370 380 390
pF1KA1 DKNDENVILQKTTNESMENSCPQVTEVTATEEHVDKMYLNILRKKITVNSSSLSQDDKIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 DKNDENVILQKTTNESMENSCPQVTEVTATEEHVDKMYLNILRKKITVNSSSLSQDDKIN
410 420 430 440 450 460
400 410 420 430 440 450
pF1KA1 KTYRSQLSSEEEGAVMGKQVPYKKARSAPPLLKRKPQSGLYASVRSSGYGKPSSPLKMFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KTYRSQLSSEEEGAVMGKQVPYKKARSAPPLLKRKPQSGLYASVRSSGYGKPSSPLKMFS
470 480 490 500 510 520
460 470 480 490 500 510
pF1KA1 TLEKKTSEDIIKSKNLRSISTSNQPRKKEILSGTKLIKPAALDKPAHKTESCLSTRKKSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 TLEKKTSEDIIKSKNLRSISTSNQPRKKEILSGTKLIKPAALDKPAHKTESCLSTRKKSE
530 540 550 560 570 580
520 530 540 550 560 570
pF1KA1 NPTETDSCIQFQTDSLGYCGENKEKKLLMFKRVQEAEDKWRGAQALIEQIKATFSEKEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 NPTETDSCIQFQTDSLGYCGENKEKKLLMFKRVQEAEDKWRGAQALIEQIKATFSEKEKE
590 600 610 620 630 640
580 590 600 610 620 630
pF1KA1 LENKLEELKKQQEKELFKLNQDNYILQAKLSSFEETNKKQRWLHFGEAADPVTGEKLKQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LENKLEELKKQQEKELFKLNQDNYILQAKLSSFEETNKKQRWLHFGEAADPVTGEKLKQI
650 660 670 680 690 700
640 650 660 670 680 690
pF1KA1 QKEIQEQETLLQGYQQENERLYNQVKDLQEQNKKNEERMFKENQSLFSEVASLKEQMHKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QKEIQEQETLLQGYQQENERLYNQVKDLQEQNKKNEERMFKENQSLFSEVASLKEQMHKS
710 720 730 740 750 760
700 710 720 730 740 750
pF1KA1 RFLSQVVEDSEPTRNQNFTDLLAELRMAQKEKDSLLEDIKRLKQDKQALEVDFEKMKKER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RFLSQVVEDSEPTRNQNFTDLLAELRMAQKEKDSLLEDIKRLKQDKQALEVDFEKMKKER
770 780 790 800 810 820
760 770 780 790 800 810
pF1KA1 DQAKDQIAYVTGEKLYEIKILEETHKQEISRLQKRLQWYAENQELLDKDALRLREANEEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 DQAKDQIAYVTGEKLYEIKILEETHKQEISRLQKRLQWYAENQELLDKDALRLREANEEI
830 840 850 860 870 880
820 830 840 850 860 870
pF1KA1 EKLKLEIEKLKAESGNPSIRQKIRLKDKAADAKKIQDLERQVKEMEGILKRRYPNSLPAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EKLKLEIEKLKAESGNPSIRQKIRLKDKAADAKKIQDLERQVKEMEGILKRRYPNSLPAL
890 900 910 920 930 940
880 890 900 910 920 930
pF1KA1 ILAASAAGDTVDKNTVEFMEKRIKKLEADLEGKDEDAKKSLRTMEQQFQKMKIQYEQRLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ILAASAAGDTVDKNTVEFMEKRIKKLEADLEGKDEDAKKSLRTMEQQFQKMKIQYEQRLE
950 960 970 980 990 1000
940 950 960 970 980 990
pF1KA1 QQEQLLACKLNQHDSPRIKALEKELDDIKEAHQITVRNLEAEIDVLKHQNAELDVKKNDK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QQEQLLACKLNQHDSPRIKALEKELDDIKEAHQITVRNLEAEIDVLKHQNAELDVKKNDK
1010 1020 1030 1040 1050 1060
1000 1010 1020 1030 1040 1050
pF1KA1 DDEDFQSIEFQVEQAHAKAKLVRLNEELAAKKREIQDLSKTVERLQKDRRMMLSNQNSKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 DDEDFQSIEFQVEQAHAKAKLVRLNEELAAKKREIQDLSKTVERLQKDRRMMLSNQNSKG
1070 1080 1090 1100 1110 1120
1060 1070 1080 1090 1100 1110
pF1KA1 REEMSAKRAKKDVLHSSKGNANSFPGTLDSKLYQPHTFTDSHVSEVLQENYRLKNELEGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 REEMSAKRAKKDVLHSSKGNANSFPGTLDSKLYQPHTFTDSHVSEVLQENYRLKNELEGL
1130 1140 1150 1160 1170 1180
1120 1130 1140 1150 1160 1170
pF1KA1 ISEKNELKMKSEAVMNQFENSMRRVKEDTAAHIASLKASHQREIEKLLCQNAVENSSSKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ISEKNELKMKSEAVMNQFENSMRRVKEDTAAHIASLKASHQREIEKLLCQNAVENSSSKV
1190 1200 1210 1220 1230 1240
1180 1190 1200 1210 1220 1230
pF1KA1 AELNRKIATQEVLIRHFQSQVNELQSKQESLVVSEVREEILQKEITKLLEELREAKENHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 AELNRKIATQEVLIRHFQSQVNELQSKQESLVVSEVREEILQKEITKLLEELREAKENHT
1250 1260 1270 1280 1290 1300
1240 1250 1260 1270 1280 1290
pF1KA1 PEMKHFVGLEKKIKQMEMRHAQREQELQQIIQQTHQVVETEQNKEVEKWKRLAQLKNREL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PEMKHFVGLEKKIKQMEMRHAQREQELQQIIQQTHQVVETEQNKEVEKWKRLAQLKNREL
1310 1320 1330 1340 1350 1360
1300 1310 1320
pF1KA1 EKFRTELDSILDVLRELHRQGVVVPVAFADEMNAPEY
:::::::::::::::::::::::::::::::::::::
CCDS34 EKFRTELDSILDVLRELHRQGVVVPVAFADEMNAPEY
1370 1380 1390 1400
1327 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:16:58 2016 done: Fri Nov 4 01:16:59 2016
Total Scan time: 5.540 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]