Result of FASTA (omim) for
pF1KA1003
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA1003, 913 aa
1>>>pF1KA1003 913 - 913 aa - 913 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.9700+/-0.000355; mu= 8.6453+/- 0.022
mean_var=157.4379+/-32.870, 0's: 0 Z-trim(118.7): 215 B-trim: 0 in 0/55
Lambda= 0.102216
statistics sampled from 31624 (31867) to 31624 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.716), E-opt: 0.2 (0.374), width: 16
Scan time: 12.380
The best scores are: opt bits E(85289)
NP_006667 (OMIM: 615143) ubiquitin carboxyl-termin ( 914) 6255 935.0 0
XP_005251722 (OMIM: 615143) PREDICTED: ubiquitin c ( 914) 6255 935.0 0
NP_001103773 (OMIM: 615143) ubiquitin carboxyl-ter ( 914) 6255 935.0 0
XP_011516463 (OMIM: 615143) PREDICTED: ubiquitin c ( 914) 6255 935.0 0
XP_011516464 (OMIM: 615143) PREDICTED: ubiquitin c ( 914) 6255 935.0 0
NP_001008563 (OMIM: 615143) ubiquitin carboxyl-ter ( 914) 6255 935.0 0
XP_005251723 (OMIM: 615143) PREDICTED: ubiquitin c ( 675) 4592 689.7 1.2e-197
XP_016869710 (OMIM: 615143) PREDICTED: ubiquitin c ( 675) 4592 689.7 1.2e-197
NP_963918 (OMIM: 615146) ubiquitin carboxyl-termin ( 911) 3097 469.3 3.7e-131
NP_055832 (OMIM: 615146) ubiquitin carboxyl-termin ( 942) 3097 469.3 3.8e-131
XP_016856211 (OMIM: 615146) PREDICTED: ubiquitin c ( 903) 2806 426.4 3e-118
XP_005270705 (OMIM: 615146) PREDICTED: ubiquitin c ( 934) 2806 426.4 3.1e-118
XP_016856216 (OMIM: 615146) PREDICTED: ubiquitin c ( 763) 2638 401.6 7.6e-111
XP_016856217 (OMIM: 615146) PREDICTED: ubiquitin c ( 763) 2638 401.6 7.6e-111
XP_016856212 (OMIM: 615146) PREDICTED: ubiquitin c ( 820) 2600 396.0 3.9e-109
XP_005270706 (OMIM: 615146) PREDICTED: ubiquitin c ( 851) 2600 396.0 4e-109
NP_963920 (OMIM: 615146) ubiquitin carboxyl-termin ( 828) 2314 353.8 2e-96
XP_016856213 (OMIM: 615146) PREDICTED: ubiquitin c ( 812) 2309 353.1 3.2e-96
XP_016856218 (OMIM: 615146) PREDICTED: ubiquitin c ( 752) 1786 276.0 5e-73
XP_016856214 (OMIM: 615146) PREDICTED: ubiquitin c ( 812) 1786 276.0 5.3e-73
XP_011539357 (OMIM: 615146) PREDICTED: ubiquitin c ( 843) 1786 276.0 5.4e-73
XP_016856215 (OMIM: 615146) PREDICTED: ubiquitin c ( 804) 1495 233.1 4.3e-60
XP_011539358 (OMIM: 615146) PREDICTED: ubiquitin c ( 600) 1365 213.8 2e-54
XP_016878257 (OMIM: 604728) PREDICTED: ubiquitin c ( 351) 424 74.9 7.7e-13
XP_016878255 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 424 75.0 9.2e-13
XP_016878256 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 424 75.0 9.2e-13
NP_001243631 (OMIM: 604728) ubiquitin carboxyl-ter ( 476) 424 75.0 9.9e-13
XP_016878252 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 424 75.0 1e-12
XP_016878254 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 424 75.0 1e-12
XP_016878253 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 424 75.0 1e-12
NP_006528 (OMIM: 604728) ubiquitin carboxyl-termin ( 520) 424 75.0 1.1e-12
XP_016874028 (OMIM: 604725) PREDICTED: ubiquitin c ( 352) 394 70.5 1.7e-11
NP_001230688 (OMIM: 604725) ubiquitin carboxyl-ter ( 362) 394 70.5 1.7e-11
NP_741994 (OMIM: 604725) ubiquitin carboxyl-termin ( 396) 394 70.5 1.8e-11
XP_005271778 (OMIM: 604725) PREDICTED: ubiquitin c ( 605) 394 70.6 2.6e-11
NP_004196 (OMIM: 604725) ubiquitin carboxyl-termin ( 605) 394 70.6 2.6e-11
XP_005271779 (OMIM: 604725) PREDICTED: ubiquitin c ( 605) 394 70.6 2.6e-11
XP_016878211 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 384 69.3 1e-10
XP_016878210 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 384 69.3 1e-10
NP_001269978 (OMIM: 603158) ubiquitin carboxyl-ter (1012) 384 69.3 1.1e-10
XP_006720825 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 384 69.3 1.2e-10
XP_016878208 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 384 69.3 1.2e-10
XP_016878209 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 384 69.3 1.2e-10
XP_016878207 (OMIM: 603158) PREDICTED: ubiquitin c (1089) 384 69.3 1.2e-10
XP_006720824 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 384 69.3 1.2e-10
NP_001122082 (OMIM: 603158) ubiquitin carboxyl-ter (1118) 384 69.3 1.2e-10
NP_005145 (OMIM: 603158) ubiquitin carboxyl-termin (1118) 384 69.3 1.2e-10
XP_011520495 (OMIM: 603158) PREDICTED: ubiquitin c (1118) 384 69.3 1.2e-10
NP_955475 (OMIM: 603486) ubiquitin carboxyl-termin ( 916) 370 67.2 4.2e-10
NP_003354 (OMIM: 603486) ubiquitin carboxyl-termin ( 963) 370 67.2 4.4e-10
>>NP_006667 (OMIM: 615143) ubiquitin carboxyl-terminal h (914 aa)
initn: 3838 init1: 3838 opt: 6255 Z-score: 4992.6 bits: 935.0 E(85289): 0
Smith-Waterman score: 6255; 99.8% identity (99.9% similar) in 914 aa overlap (1-913:1-914)
10 20 30 40 50 60
pF1KA1 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
250 260 270 280 290 300
310 320 330 340 350
pF1KA1 GGGSSQAETELLIPDEAGRVISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALD-Q
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: :
NP_006 GGGSSQAETELLIPDEAGRAISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALDDQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA1 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA1 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA1 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA1 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
550 560 570 580 590 600
600 610 620 630 640 650
pF1KA1 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
610 620 630 640 650 660
660 670 680 690 700 710
pF1KA1 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
670 680 690 700 710 720
720 730 740 750 760 770
pF1KA1 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
730 740 750 760 770 780
780 790 800 810 820 830
pF1KA1 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
790 800 810 820 830 840
840 850 860 870 880 890
pF1KA1 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
850 860 870 880 890 900
900 910
pF1KA1 LHGEQKIEAETRAV
::::::::::::::
NP_006 LHGEQKIEAETRAV
910
>>XP_005251722 (OMIM: 615143) PREDICTED: ubiquitin carbo (914 aa)
initn: 3838 init1: 3838 opt: 6255 Z-score: 4992.6 bits: 935.0 E(85289): 0
Smith-Waterman score: 6255; 99.8% identity (99.9% similar) in 914 aa overlap (1-913:1-914)
10 20 30 40 50 60
pF1KA1 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
250 260 270 280 290 300
310 320 330 340 350
pF1KA1 GGGSSQAETELLIPDEAGRVISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALD-Q
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: :
XP_005 GGGSSQAETELLIPDEAGRAISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALDDQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA1 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA1 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA1 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA1 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
550 560 570 580 590 600
600 610 620 630 640 650
pF1KA1 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
610 620 630 640 650 660
660 670 680 690 700 710
pF1KA1 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
670 680 690 700 710 720
720 730 740 750 760 770
pF1KA1 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
730 740 750 760 770 780
780 790 800 810 820 830
pF1KA1 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
790 800 810 820 830 840
840 850 860 870 880 890
pF1KA1 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
850 860 870 880 890 900
900 910
pF1KA1 LHGEQKIEAETRAV
::::::::::::::
XP_005 LHGEQKIEAETRAV
910
>>NP_001103773 (OMIM: 615143) ubiquitin carboxyl-termina (914 aa)
initn: 3838 init1: 3838 opt: 6255 Z-score: 4992.6 bits: 935.0 E(85289): 0
Smith-Waterman score: 6255; 99.8% identity (99.9% similar) in 914 aa overlap (1-913:1-914)
10 20 30 40 50 60
pF1KA1 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
250 260 270 280 290 300
310 320 330 340 350
pF1KA1 GGGSSQAETELLIPDEAGRVISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALD-Q
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: :
NP_001 GGGSSQAETELLIPDEAGRAISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALDDQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA1 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA1 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA1 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA1 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
550 560 570 580 590 600
600 610 620 630 640 650
pF1KA1 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
610 620 630 640 650 660
660 670 680 690 700 710
pF1KA1 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
670 680 690 700 710 720
720 730 740 750 760 770
pF1KA1 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
730 740 750 760 770 780
780 790 800 810 820 830
pF1KA1 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
790 800 810 820 830 840
840 850 860 870 880 890
pF1KA1 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
850 860 870 880 890 900
900 910
pF1KA1 LHGEQKIEAETRAV
::::::::::::::
NP_001 LHGEQKIEAETRAV
910
>>XP_011516463 (OMIM: 615143) PREDICTED: ubiquitin carbo (914 aa)
initn: 3838 init1: 3838 opt: 6255 Z-score: 4992.6 bits: 935.0 E(85289): 0
Smith-Waterman score: 6255; 99.8% identity (99.9% similar) in 914 aa overlap (1-913:1-914)
10 20 30 40 50 60
pF1KA1 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
250 260 270 280 290 300
310 320 330 340 350
pF1KA1 GGGSSQAETELLIPDEAGRVISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALD-Q
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: :
XP_011 GGGSSQAETELLIPDEAGRAISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALDDQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA1 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA1 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA1 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA1 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
550 560 570 580 590 600
600 610 620 630 640 650
pF1KA1 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
610 620 630 640 650 660
660 670 680 690 700 710
pF1KA1 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
670 680 690 700 710 720
720 730 740 750 760 770
pF1KA1 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
730 740 750 760 770 780
780 790 800 810 820 830
pF1KA1 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
790 800 810 820 830 840
840 850 860 870 880 890
pF1KA1 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
850 860 870 880 890 900
900 910
pF1KA1 LHGEQKIEAETRAV
::::::::::::::
XP_011 LHGEQKIEAETRAV
910
>>XP_011516464 (OMIM: 615143) PREDICTED: ubiquitin carbo (914 aa)
initn: 3838 init1: 3838 opt: 6255 Z-score: 4992.6 bits: 935.0 E(85289): 0
Smith-Waterman score: 6255; 99.8% identity (99.9% similar) in 914 aa overlap (1-913:1-914)
10 20 30 40 50 60
pF1KA1 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
250 260 270 280 290 300
310 320 330 340 350
pF1KA1 GGGSSQAETELLIPDEAGRVISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALD-Q
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: :
XP_011 GGGSSQAETELLIPDEAGRAISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALDDQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA1 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA1 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA1 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA1 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
550 560 570 580 590 600
600 610 620 630 640 650
pF1KA1 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
610 620 630 640 650 660
660 670 680 690 700 710
pF1KA1 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
670 680 690 700 710 720
720 730 740 750 760 770
pF1KA1 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
730 740 750 760 770 780
780 790 800 810 820 830
pF1KA1 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
790 800 810 820 830 840
840 850 860 870 880 890
pF1KA1 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
850 860 870 880 890 900
900 910
pF1KA1 LHGEQKIEAETRAV
::::::::::::::
XP_011 LHGEQKIEAETRAV
910
>>NP_001008563 (OMIM: 615143) ubiquitin carboxyl-termina (914 aa)
initn: 3838 init1: 3838 opt: 6255 Z-score: 4992.6 bits: 935.0 E(85289): 0
Smith-Waterman score: 6255; 99.8% identity (99.9% similar) in 914 aa overlap (1-913:1-914)
10 20 30 40 50 60
pF1KA1 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA1 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAAPLLGSSSKFSEQDSPPPSHPLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA1 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVPIAVADEGESESEDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA1 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA1 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDSSSDRGEGDGQGR
250 260 270 280 290 300
310 320 330 340 350
pF1KA1 GGGSSQAETELLIPDEAGRVISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALD-Q
:::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: :
NP_001 GGGSSQAETELLIPDEAGRAISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALDDQ
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA1 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEGHAKLSSSPPRASPVRMAPS
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA1 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YVLKKAQVLSAGSRRRKEQRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA1 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLE
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA1 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIN
550 560 570 580 590 600
600 610 620 630 640 650
pF1KA1 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFD
610 620 630 640 650 660
660 670 680 690 700 710
pF1KA1 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKF
670 680 690 700 710 720
720 730 740 750 760 770
pF1KA1 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVC
730 740 750 760 770 780
780 790 800 810 820 830
pF1KA1 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPP
790 800 810 820 830 840
840 850 860 870 880 890
pF1KA1 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPEN
850 860 870 880 890 900
900 910
pF1KA1 LHGEQKIEAETRAV
::::::::::::::
NP_001 LHGEQKIEAETRAV
910
>>XP_005251723 (OMIM: 615143) PREDICTED: ubiquitin carbo (675 aa)
initn: 3838 init1: 3838 opt: 4592 Z-score: 3669.1 bits: 689.7 E(85289): 1.2e-197
Smith-Waterman score: 4592; 99.7% identity (99.9% similar) in 675 aa overlap (240-913:1-675)
210 220 230 240 250 260
pF1KA1 PTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTEARDSDSSDTD
::::::::::::::::::::::::::::::
XP_005 MDQLHEELKEPVVATVALTEARDSDSSDTD
10 20 30
270 280 290 300 310 320
pF1KA1 EKREGDRSPSEDEFLSCDSSSDRGEGDGQGRGGGSSQAETELLIPDEAGRVISEKERMKD
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_005 EKREGDRSPSEDEFLSCDSSSDRGEGDGQGRGGGSSQAETELLIPDEAGRAISEKERMKD
40 50 60 70 80 90
330 340 350 360 370 380
pF1KA1 RKFSWGQQRTNSEQVDEDADVDTAMAALD-QPAEAQPPSPRSSSPCRTPEPDNDAHLRSS
::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::
XP_005 RKFSWGQQRTNSEQVDEDADVDTAMAALDDQPAEAQPPSPRSSSPCRTPEPDNDAHLRSS
100 110 120 130 140 150
390 400 410 420 430 440
pF1KA1 SRPCSPVHHHEGHAKLSSSPPRASPVRMAPSYVLKKAQVLSAGSRRRKEQRYRSVISDIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRPCSPVHHHEGHAKLSSSPPRASPVRMAPSYVLKKAQVLSAGSRRRKEQRYRSVISDIF
160 170 180 190 200 210
450 460 470 480 490 500
pF1KA1 DGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGACGDSYAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGACGDSYAA
220 230 240 250 260 270
510 520 530 540 550 560
pF1KA1 QGWLAFIVEYIRRFVVSCTPSWFWGPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QGWLAFIVEYIRRFVVSCTPSWFWGPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNG
280 290 300 310 320 330
570 580 590 600 610 620
pF1KA1 VKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQITTYDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQITTYDL
340 350 360 370 380 390
630 640 650 660 670 680
pF1KA1 LSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRKSSEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRKSSEEA
400 410 420 430 440 450
690 700 710 720 730 740
pF1KA1 MRERQQVVSLAAMREPSLLRFYVSREWLNKFNTFAEPGPITNQTFLCSHGGIPPHKYHYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRERQQVVSLAAMREPSLLRFYVSREWLNKFNTFAEPGPITNQTFLCSHGGIPPHKYHYI
460 470 480 490 500 510
750 760 770 780 790 800
pF1KA1 DDLVVILPQNVWEHLYNRFGGGPAVNHLYVCSICQVEIEALAKRRRIEIDTFIKLNKAFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DDLVVILPQNVWEHLYNRFGGGPAVNHLYVCSICQVEIEALAKRRRIEIDTFIKLNKAFQ
520 530 540 550 560 570
810 820 830 840 850 860
pF1KA1 AEESPGVIYCISMQWFREWEAFVKGKDNEPPGPIDNSRIAQVKGSGHVQLKQGADYGQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AEESPGVIYCISMQWFREWEAFVKGKDNEPPGPIDNSRIAQVKGSGHVQLKQGADYGQIS
580 590 600 610 620 630
870 880 890 900 910
pF1KA1 EETWTYLNSLYGGGPEIAIRQSVAQPLGPENLHGEQKIEAETRAV
:::::::::::::::::::::::::::::::::::::::::::::
XP_005 EETWTYLNSLYGGGPEIAIRQSVAQPLGPENLHGEQKIEAETRAV
640 650 660 670
>>XP_016869710 (OMIM: 615143) PREDICTED: ubiquitin carbo (675 aa)
initn: 3838 init1: 3838 opt: 4592 Z-score: 3669.1 bits: 689.7 E(85289): 1.2e-197
Smith-Waterman score: 4592; 99.7% identity (99.9% similar) in 675 aa overlap (240-913:1-675)
210 220 230 240 250 260
pF1KA1 PTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTEARDSDSSDTD
::::::::::::::::::::::::::::::
XP_016 MDQLHEELKEPVVATVALTEARDSDSSDTD
10 20 30
270 280 290 300 310 320
pF1KA1 EKREGDRSPSEDEFLSCDSSSDRGEGDGQGRGGGSSQAETELLIPDEAGRVISEKERMKD
::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::
XP_016 EKREGDRSPSEDEFLSCDSSSDRGEGDGQGRGGGSSQAETELLIPDEAGRAISEKERMKD
40 50 60 70 80 90
330 340 350 360 370 380
pF1KA1 RKFSWGQQRTNSEQVDEDADVDTAMAALD-QPAEAQPPSPRSSSPCRTPEPDNDAHLRSS
::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::
XP_016 RKFSWGQQRTNSEQVDEDADVDTAMAALDDQPAEAQPPSPRSSSPCRTPEPDNDAHLRSS
100 110 120 130 140 150
390 400 410 420 430 440
pF1KA1 SRPCSPVHHHEGHAKLSSSPPRASPVRMAPSYVLKKAQVLSAGSRRRKEQRYRSVISDIF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SRPCSPVHHHEGHAKLSSSPPRASPVRMAPSYVLKKAQVLSAGSRRRKEQRYRSVISDIF
160 170 180 190 200 210
450 460 470 480 490 500
pF1KA1 DGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGACGDSYAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGACGDSYAA
220 230 240 250 260 270
510 520 530 540 550 560
pF1KA1 QGWLAFIVEYIRRFVVSCTPSWFWGPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QGWLAFIVEYIRRFVVSCTPSWFWGPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNG
280 290 300 310 320 330
570 580 590 600 610 620
pF1KA1 VKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQITTYDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQITTYDL
340 350 360 370 380 390
630 640 650 660 670 680
pF1KA1 LSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRKSSEEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRKSSEEA
400 410 420 430 440 450
690 700 710 720 730 740
pF1KA1 MRERQQVVSLAAMREPSLLRFYVSREWLNKFNTFAEPGPITNQTFLCSHGGIPPHKYHYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRERQQVVSLAAMREPSLLRFYVSREWLNKFNTFAEPGPITNQTFLCSHGGIPPHKYHYI
460 470 480 490 500 510
750 760 770 780 790 800
pF1KA1 DDLVVILPQNVWEHLYNRFGGGPAVNHLYVCSICQVEIEALAKRRRIEIDTFIKLNKAFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DDLVVILPQNVWEHLYNRFGGGPAVNHLYVCSICQVEIEALAKRRRIEIDTFIKLNKAFQ
520 530 540 550 560 570
810 820 830 840 850 860
pF1KA1 AEESPGVIYCISMQWFREWEAFVKGKDNEPPGPIDNSRIAQVKGSGHVQLKQGADYGQIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEESPGVIYCISMQWFREWEAFVKGKDNEPPGPIDNSRIAQVKGSGHVQLKQGADYGQIS
580 590 600 610 620 630
870 880 890 900 910
pF1KA1 EETWTYLNSLYGGGPEIAIRQSVAQPLGPENLHGEQKIEAETRAV
:::::::::::::::::::::::::::::::::::::::::::::
XP_016 EETWTYLNSLYGGGPEIAIRQSVAQPLGPENLHGEQKIEAETRAV
640 650 660 670
>>NP_963918 (OMIM: 615146) ubiquitin carboxyl-terminal h (911 aa)
initn: 2668 init1: 2470 opt: 3097 Z-score: 2475.7 bits: 469.3 E(85289): 3.7e-131
Smith-Waterman score: 3772; 60.1% identity (81.7% similar) in 928 aa overlap (1-913:1-911)
10 20 30 40 50 60
pF1KA1 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTCQSCGVTGPNLWACLQVACPYVGCGESFADH
:. :. ::::::.::.:::::. :: ::::.: : ::::::::. : ::::::: .::
NP_963 MSAFRNHCPHLDSVGEITKEDLIQKSLGTCQDCKVQGPNLWACLENRCSYVGCGESQVDH
10 20 30 40 50 60
70 80 90 100 110
pF1KA1 STIHAQAKKHNLTVNLTTFRLWCYACEKEVFLEQRLAA----PLLGSSSKFSE---QDSP
::::.: :: :::::::.:.::::: :::::...:.. : . . ...: ::
NP_963 STIHSQETKHYLTVNLTTLRVWCYACSKEVFLDRKLGTQPSLPHVRQPHQIQENSVQDFK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA1 PPSHPLKAVP-IAVADEGESES-EDDDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQ
::. .: .:: :. . :. :.:.:. :::::.::.::.::::::::::::::::::
NP_963 IPSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQ
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA1 FFLECGGLVRTDKKPALCKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQD
:::.::::.:::::::.:::: ::..:.:::.::. ::::.: .::: ::: ::::.:::
NP_963 FFLDCGGLARTDKKPAICKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVNPTFRGYSQQD
190 200 210 220 230 240
240 250 260 270 280
pF1KA1 TQEFLRCLMDQLHEELKEPVVATVALTEARDSDSSDTDEKREGDRSPSEDEFLSCDS--S
.::::::::: ::::::: :. . .: .. :.: : :.: :. .: ::.: .
NP_963 AQEFLRCLMDLLHEELKEQVMEV-----EEDPQTITTEETMEEDKSQSDVDFQSCESCSN
250 260 270 280 290
290 300 310 320 330 340
pF1KA1 SDRGEGDGQGRGGGSSQAETELLIPDEAGRVISEKERMKDRKFSWGQQRTNSEQVDEDAD
:::.:... .: . .. :: .:: :. . :. .:. :. ...::: . : :
NP_963 SDRAENENGSRCFSEDNNETTMLIQDDENNSEMSKDWQKE-KMCNKINKVNSEG-EFDKD
300 310 320 330 340 350
350 360 370 380 390 400
pF1KA1 VDTAMAALDQPAEAQPPSPRSSSPCRTPEPDNDAHLRSSSRPCSPVHHHEG-HAKLSSSP
:. ..: . . . . :. : .:.: . : : . . .:: . .::.::
NP_963 RDSISETVDLNNQE---TVKVQIHSRASEYITDVHSNDLSTP-QILPSNEGVNPRLSASP
360 370 380 390 400
410 420 430 440 450 460
pF1KA1 PRASPVR--MAPSYVLKKAQVLSAGSRRRKE-QRYRSVISDIFDGSILSLVQCLTCDRVS
:... . .:: . :::: ::. .:.:. ..:::::::::::.:.: ::::::::::
NP_963 PKSGNLWPGLAPPH--KKAQ--SASPKRKKQHKKYRSVISDIFDGTIISSVQCLTCDRVS
410 420 430 440 450 460
470 480 490 500 510 520
pF1KA1 TTVETFQDLSLPIPGKEDLAKLHSAIYQNVPAKPGACGDSYAAQGWLAFIVEYIRRFVVS
.:.:::::::::::::::::::::. . . .: :.::..:: :::.::..::..:::::
NP_963 VTLETFQDLSLPIPGKEDLAKLHSSSHPTSIVKAGSCGEAYAPQGWIAFFMEYVKRFVVS
470 480 490 500 510 520
530 540 550 560 570 580
pF1KA1 CTPSWFWGPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHL
:.:::::::::::.:::::::: ::::::::::::.:::::::::.::: .::::::::
NP_963 CVPSWFWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQNFPEILCIHL
530 540 550 560 570 580
590 600 610 620 630 640
pF1KA1 KRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTSQITTYDLLSVICHHGTAGSGHYIA
::::::.:.: ::..:::::::::::.:::::. .::.::::::::::::::.::::::
NP_963 KRFRHELMFSTKISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTASSGHYIA
590 600 610 620 630 640
650 660 670 680 690 700
pF1KA1 YCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPS
::.: .:. ::::::: :::: :..:::::.::::::::::::..::... .: . :::
NP_963 YCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKERRRISNLLNIMEPS
650 660 670 680 690 700
710 720 730 740 750 760
pF1KA1 LLRFYVSREWLNKFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYN
::.::.::.:::::.::::::::.:. ::: :::.::.: ::.:::..::::.:..::.
NP_963 LLQFYISRQWLNKFKTFAEPGPISNNDFLCIHGGVPPRKAGYIEDLVLMLPQNIWDNLYS
710 720 730 740 750 760
770 780 790 800 810 820
pF1KA1 RFGGGPAVNHLYVCSICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFR
:.::::::::::.: ::.: : . :::. :.. ::.::.::: :.::...:::::::::
NP_963 RYGGGPAVNHLYICHTCQIEAEKIEKRRKTELEIFIRLNRAFQKEDSPATFYCISMQWFR
770 780 790 800 810 820
830 840 850 860 870 880
pF1KA1 EWEAFVKGKDNEPPGPIDNSRIAQVKGSGHVQLKQGADYGQISEETWTYLNSLYGGGPEI
:::.::::::..:::::::..:: .: :.:.:.:::: ::::::::..:.:.::::::.
NP_963 EWESFVKGKDGDPPGPIDNTKIAVTK-CGNVMLRQGADSGQISEETWNFLQSIYGGGPEV
830 840 850 860 870 880
890 900 910
pF1KA1 AIRQSVAQPLGPENLHGEQKIEAETRAV
.: :.. . :. :..:.:::.:::..
NP_963 ILRPPVVH-VDPDILQAEEKIEVETRSL
890 900 910
>>NP_055832 (OMIM: 615146) ubiquitin carboxyl-terminal h (942 aa)
initn: 2668 init1: 2470 opt: 3097 Z-score: 2475.5 bits: 469.3 E(85289): 3.8e-131
Smith-Waterman score: 3772; 60.1% identity (81.7% similar) in 928 aa overlap (1-913:32-942)
10 20 30
pF1KA1 MGDSRDLCPHLDSIGEVTKEDLLLKSKGTC
:. :. ::::::.::.:::::. :: :::
NP_055 TGSNSHITILTLKVLPHFESLGKQEKIPNKMSAFRNHCPHLDSVGEITKEDLIQKSLGTC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA1 QSCGVTGPNLWACLQVACPYVGCGESFADHSTIHAQAKKHNLTVNLTTFRLWCYACEKEV
:.: : ::::::::. : ::::::: .::::::.: :: :::::::.:.::::: :::
NP_055 QDCKVQGPNLWACLENRCSYVGCGESQVDHSTIHSQETKHYLTVNLTTLRVWCYACSKEV
70 80 90 100 110 120
100 110 120 130 140
pF1KA1 FLEQRLAA----PLLGSSSKFSE---QDSPPPSHPLKAVP-IAVADEGESES-EDDDLKP
::...:.. : . . ...: :: ::. .: .:: :. . :. :.:.:.
NP_055 FLDRKLGTQPSLPHVRQPHQIQENSVQDFKIPSNTTLKTPLVAVFDDLDIEADEEDELRA
130 140 150 160 170 180
150 160 170 180 190 200
pF1KA1 RGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSYQKLVSEVWH
:::::.::.::.:::::::::::::::::::::.::::.:::::::.:::: ::..:.::
NP_055 RGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH
190 200 210 220 230 240
210 220 230 240 250 260
pF1KA1 KKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVATVALTEAR
:.::. ::::.: .::: ::: ::::.:::.::::::::: ::::::: :. . .
NP_055 KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEV-----EE
250 260 270 280 290
270 280 290 300 310
pF1KA1 DSDSSDTDEKREGDRSPSEDEFLSCDS--SSDRGEGDGQGRGGGSSQAETELLIPDEAGR
: .. :.: : :.: :. .: ::.: .:::.:... .: . .. :: .:: :. .
NP_055 DPQTITTEETMEEDKSQSDVDFQSCESCSNSDRAENENGSRCFSEDNNETTMLIQDDENN
300 310 320 330 340 350
320 330 340 350 360 370
pF1KA1 VISEKERMKDRKFSWGQQRTNSEQVDEDADVDTAMAALDQPAEAQPPSPRSSSPCRTPEP
:. .:. :. ...::: . : : :. ..: . . . . :. :
NP_055 SEMSKDWQKE-KMCNKINKVNSEG-EFDKDRDSISETVDLNNQE---TVKVQIHSRASEY
360 370 380 390 400 410
380 390 400 410 420 430
pF1KA1 DNDAHLRSSSRPCSPVHHHEG-HAKLSSSPPRASPVR--MAPSYVLKKAQVLSAGSRRRK
.:.: . : : . . .:: . .::.:::... . .:: . :::: ::. .:.:
NP_055 ITDVHSNDLSTP-QILPSNEGVNPRLSASPPKSGNLWPGLAPPH--KKAQ--SASPKRKK
420 430 440 450 460
440 450 460 470 480 490
pF1KA1 E-QRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAIYQNV
. ..:::::::::::.:.: ::::::::::.:.:::::::::::::::::::::. . .
NP_055 QHKKYRSVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSSSHPTS
470 480 490 500 510 520
500 510 520 530 540 550
pF1KA1 PAKPGACGDSYAAQGWLAFIVEYIRRFVVSCTPSWFWGPVVTLEDCLAAFFAADELKGDN
.: :.::..:: :::.::..::..::::::.:::::::::::.:::::::: :::::::
NP_055 IVKAGSCGEAYAPQGWIAFFMEYVKRFVVSCVPSWFWGPVVTLQDCLAAFFARDELKGDN
530 540 550 560 570 580
560 570 580 590 600 610
pF1KA1 MYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFL
:::::.:::::::::.::: .::::::::::::::.:.: ::..:::::::::::.:::
NP_055 MYSCEKCKKLRNGVKFCKVQNFPEILCIHLKRFRHELMFSTKISTHVSFPLEGLDLQPFL
590 600 610 620 630 640
620 630 640 650 660 670
pF1KA1 AKECTSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAE
::. .::.::::::::::::::.::::::::.: .:. ::::::: :::: :..:::::
NP_055 AKDSPAQIVTYDLLSVICHHGTASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAE
650 660 670 680 690 700
680 690 700 710 720 730
pF1KA1 GYVLFYRKSSEEAMRERQQVVSLAAMREPSLLRFYVSREWLNKFNTFAEPGPITNQTFLC
.::::::::::::..::... .: . :::::.::.::.:::::.::::::::.:. :::
NP_055 AYVLFYRKSSEEAQKERRRISNLLNIMEPSLLQFYISRQWLNKFKTFAEPGPISNNDFLC
710 720 730 740 750 760
740 750 760 770 780 790
pF1KA1 SHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGGPAVNHLYVCSICQVEIEALAKRRRI
:::.::.: ::.:::..::::.:..::.:.::::::::::.: ::.: : . :::.
NP_055 IHGGVPPRKAGYIEDLVLMLPQNIWDNLYSRYGGGPAVNHLYICHTCQIEAEKIEKRRKT
770 780 790 800 810 820
800 810 820 830 840 850
pF1KA1 EIDTFIKLNKAFQAEESPGVIYCISMQWFREWEAFVKGKDNEPPGPIDNSRIAQVKGSGH
:.. ::.::.::: :.::...::::::::::::.::::::..:::::::..:: .: :.
NP_055 ELEIFIRLNRAFQKEDSPATFYCISMQWFREWESFVKGKDGDPPGPIDNTKIAVTK-CGN
830 840 850 860 870 880
860 870 880 890 900 910
pF1KA1 VQLKQGADYGQISEETWTYLNSLYGGGPEIAIRQSVAQPLGPENLHGEQKIEAETRAV
:.:.:::: ::::::::..:.:.::::::. .: :.. . :. :..:.:::.:::..
NP_055 VMLRQGADSGQISEETWNFLQSIYGGGPEVILRPPVVH-VDPDILQAEEKIEVETRSL
890 900 910 920 930 940
913 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 20:14:13 2016 done: Wed Nov 2 20:14:15 2016
Total Scan time: 12.380 Total Display time: 0.290
Function used was FASTA [36.3.4 Apr, 2011]