Result of FASTA (omim) for
pF1KA0943
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0943, 393 aa
1>>>pF1KA0943 393 - 393 aa - 393 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7072+/-0.000335; mu= 14.4743+/- 0.021
mean_var=71.0532+/-14.559, 0's: 0 Z-trim(115.2): 38 B-trim: 0 in 0/53
Lambda= 0.152154
statistics sampled from 25441 (25479) to 25441 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.676), E-opt: 0.2 (0.299), width: 16
Scan time: 8.450
The best scores are: opt bits E(85289)
NP_037457 (OMIM: 611338) cysteine protease ATG4B i ( 393) 2739 610.4 2.4e-174
XP_016859127 (OMIM: 611338) PREDICTED: cysteine pr ( 457) 2719 606.0 5.6e-173
XP_005247050 (OMIM: 611338) PREDICTED: cysteine pr ( 405) 2594 578.6 9.2e-165
NP_847896 (OMIM: 611338) cysteine protease ATG4B i ( 380) 2589 577.5 1.9e-164
XP_005247049 (OMIM: 611338) PREDICTED: cysteine pr ( 415) 2589 577.5 2e-164
XP_016859126 (OMIM: 611338) PREDICTED: cysteine pr ( 479) 2569 573.1 4.8e-163
XP_005247053 (OMIM: 611338) PREDICTED: cysteine pr ( 319) 2227 498.0 1.3e-140
XP_016859129 (OMIM: 611338) PREDICTED: cysteine pr ( 319) 2227 498.0 1.3e-140
XP_016859128 (OMIM: 611338) PREDICTED: cysteine pr ( 341) 2077 465.0 1.2e-130
XP_005247052 (OMIM: 611338) PREDICTED: cysteine pr ( 341) 2077 465.0 1.2e-130
NP_443168 (OMIM: 300663) cysteine protease ATG4A i ( 398) 1507 340.0 6.1e-93
XP_011529144 (OMIM: 300663) PREDICTED: cysteine pr ( 321) 1223 277.6 3e-74
NP_001308216 (OMIM: 300663) cysteine protease ATG4 ( 321) 1223 277.6 3e-74
NP_001308217 (OMIM: 300663) cysteine protease ATG4 ( 321) 1223 277.6 3e-74
NP_840055 (OMIM: 300663) cysteine protease ATG4A i ( 321) 1223 277.6 3e-74
NP_840054 (OMIM: 300663) cysteine protease ATG4A i ( 336) 889 204.3 3.6e-52
XP_011529143 (OMIM: 300663) PREDICTED: cysteine pr ( 340) 889 204.3 3.7e-52
NP_001308219 (OMIM: 300663) cysteine protease ATG4 ( 226) 710 164.9 1.7e-40
NP_001308218 (OMIM: 300663) cysteine protease ATG4 ( 259) 605 141.9 1.7e-33
NP_001268433 (OMIM: 611340) cysteine protease ATG4 ( 411) 588 138.2 3.4e-32
NP_116274 (OMIM: 611340) cysteine protease ATG4D i ( 474) 588 138.3 3.8e-32
XP_016858090 (OMIM: 611339) PREDICTED: cysteine pr ( 418) 245 62.9 1.6e-09
XP_016858089 (OMIM: 611339) PREDICTED: cysteine pr ( 418) 245 62.9 1.6e-09
XP_011540615 (OMIM: 611339) PREDICTED: cysteine pr ( 423) 245 62.9 1.6e-09
NP_116241 (OMIM: 611339) cysteine protease ATG4C [ ( 458) 245 63.0 1.7e-09
XP_005271345 (OMIM: 611339) PREDICTED: cysteine pr ( 458) 245 63.0 1.7e-09
NP_835739 (OMIM: 611339) cysteine protease ATG4C [ ( 458) 245 63.0 1.7e-09
XP_006722990 (OMIM: 611340) PREDICTED: cysteine pr ( 360) 227 59.0 2.1e-08
>>NP_037457 (OMIM: 611338) cysteine protease ATG4B isofo (393 aa)
initn: 2739 init1: 2739 opt: 2739 Z-score: 3251.2 bits: 610.4 E(85289): 2.4e-174
Smith-Waterman score: 2739; 99.7% identity (99.7% similar) in 393 aa overlap (1-393:1-393)
10 20 30 40 50 60
pF1KA0 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQQPSHLA
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
NP_037 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVELQPSHLA
310 320 330 340 350 360
370 380 390
pF1KA0 CPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
:::::::::::::::::::::::::::::::::
NP_037 CPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
370 380 390
>>XP_016859127 (OMIM: 611338) PREDICTED: cysteine protea (457 aa)
initn: 2719 init1: 2719 opt: 2719 Z-score: 3226.4 bits: 606.0 E(85289): 5.6e-173
Smith-Waterman score: 2719; 99.7% identity (99.7% similar) in 390 aa overlap (4-393:68-457)
10 20 30
pF1KA0 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKY
::::::::::::::::::::::::::::::
XP_016 VHRWAPGLHYGTDTMATMTVCSAPGGSGCVATLTYDTLRFAEFEDFPETSEPVWILGRKY
40 50 60 70 80 90
40 50 60 70 80 90
pF1KA0 SIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLG
100 110 120 130 140 150
100 110 120 130 140 150
pF1KA0 RDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLK
160 170 180 190 200 210
160 170 180 190 200 210
pF1KA0 KLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVT
220 230 240 250 260 270
220 230 240 250 260 270
pF1KA0 NRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEE
280 290 300 310 320 330
280 290 300 310 320 330
pF1KA0 LIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWC
340 350 360 370 380 390
340 350 360 370 380 390
pF1KA0 QQVKKLSLLGGALPMFELVEQQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
XP_016 QQVKKLSLLGGALPMFELVELQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
400 410 420 430 440 450
>>XP_005247050 (OMIM: 611338) PREDICTED: cysteine protea (405 aa)
initn: 2589 init1: 2589 opt: 2594 Z-score: 3079.0 bits: 578.6 E(85289): 9.2e-165
Smith-Waterman score: 2705; 96.8% identity (96.8% similar) in 405 aa overlap (1-393:1-405)
10 20 30 40 50 60
pF1KA0 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQQPSHLA
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_005 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVELQPSHLA
310 320 330 340 350 360
370 380 390
pF1KA0 CPDVLNLSL------------DSSDVERLERFFDSEDEDFEILSL
::::::::: ::::::::::::::::::::::::
XP_005 CPDVLNLSLGESCQVQVGSLGDSSDVERLERFFDSEDEDFEILSL
370 380 390 400
>>NP_847896 (OMIM: 611338) cysteine protease ATG4B isofo (380 aa)
initn: 2589 init1: 2589 opt: 2589 Z-score: 3073.5 bits: 577.5 E(85289): 1.9e-164
Smith-Waterman score: 2589; 99.2% identity (99.2% similar) in 372 aa overlap (1-372:1-372)
10 20 30 40 50 60
pF1KA0 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_847 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_847 IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_847 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_847 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_847 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQQPSHLA
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
NP_847 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVELQPSHLA
310 320 330 340 350 360
370 380 390
pF1KA0 CPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
::::::::: :
NP_847 CPDVLNLSLGESCQVQILLM
370 380
>>XP_005247049 (OMIM: 611338) PREDICTED: cysteine protea (415 aa)
initn: 2589 init1: 2589 opt: 2589 Z-score: 3072.9 bits: 577.5 E(85289): 2e-164
Smith-Waterman score: 2589; 99.2% identity (99.2% similar) in 372 aa overlap (1-372:1-372)
10 20 30 40 50 60
pF1KA0 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVEQQPSHLA
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_005 CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVELQPSHLA
310 320 330 340 350 360
370 380 390
pF1KA0 CPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
::::::::: :
XP_005 CPDVLNLSLGESCQVQVGSLGGTICALASPVLAPLVLTIKVCVSLSREHLAVVRL
370 380 390 400 410
>>XP_016859126 (OMIM: 611338) PREDICTED: cysteine protea (479 aa)
initn: 2569 init1: 2569 opt: 2569 Z-score: 3048.2 bits: 573.1 E(85289): 4.8e-163
Smith-Waterman score: 2569; 99.2% identity (99.2% similar) in 369 aa overlap (4-372:68-436)
10 20 30
pF1KA0 MDAATLTYDTLRFAEFEDFPETSEPVWILGRKY
::::::::::::::::::::::::::::::
XP_016 VHRWAPGLHYGTDTMATMTVCSAPGGSGCVATLTYDTLRFAEFEDFPETSEPVWILGRKY
40 50 60 70 80 90
40 50 60 70 80 90
pF1KA0 SIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SIFTEKDEILSDVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLG
100 110 120 130 140 150
100 110 120 130 140 150
pF1KA0 RDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RDWRWTQRKRQPDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLK
160 170 180 190 200 210
160 170 180 190 200 210
pF1KA0 KLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVT
220 230 240 250 260 270
220 230 240 250 260 270
pF1KA0 NRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPSPWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEE
280 290 300 310 320 330
280 290 300 310 320 330
pF1KA0 LIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIYLDPHTTQPAVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWC
340 350 360 370 380 390
340 350 360 370 380 390
pF1KA0 QQVKKLSLLGGALPMFELVEQQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
:::::::::::::::::::: ::::::::::::::: :
XP_016 QQVKKLSLLGGALPMFELVELQPSHLACPDVLNLSLGESCQVQVGSLGGTICALASPVLA
400 410 420 430 440 450
XP_016 PLVLTIKVCVSLSREHLAVVRL
460 470
>>XP_005247053 (OMIM: 611338) PREDICTED: cysteine protea (319 aa)
initn: 2227 init1: 2227 opt: 2227 Z-score: 2645.2 bits: 498.0 E(85289): 1.3e-140
Smith-Waterman score: 2227; 99.7% identity (99.7% similar) in 319 aa overlap (75-393:1-319)
50 60 70 80 90 100
pF1KA0 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ
::::::::::::::::::::::::::::::
XP_005 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQ
10 20 30
110 120 130 140 150 160
pF1KA0 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KA0 AVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KA0 LIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP
160 170 180 190 200 210
290 300 310 320 330 340
pF1KA0 AVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGG
220 230 240 250 260 270
350 360 370 380 390
pF1KA0 ALPMFELVEQQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
::::::::: :::::::::::::::::::::::::::::::::::::::
XP_005 ALPMFELVELQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
280 290 300 310
>>XP_016859129 (OMIM: 611338) PREDICTED: cysteine protea (319 aa)
initn: 2227 init1: 2227 opt: 2227 Z-score: 2645.2 bits: 498.0 E(85289): 1.3e-140
Smith-Waterman score: 2227; 99.7% identity (99.7% similar) in 319 aa overlap (75-393:1-319)
50 60 70 80 90 100
pF1KA0 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ
::::::::::::::::::::::::::::::
XP_016 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQ
10 20 30
110 120 130 140 150 160
pF1KA0 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KA0 AVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KA0 LIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP
160 170 180 190 200 210
290 300 310 320 330 340
pF1KA0 AVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGG
220 230 240 250 260 270
350 360 370 380 390
pF1KA0 ALPMFELVEQQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
::::::::: :::::::::::::::::::::::::::::::::::::::
XP_016 ALPMFELVELQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
280 290 300 310
>>XP_016859128 (OMIM: 611338) PREDICTED: cysteine protea (341 aa)
initn: 2077 init1: 2077 opt: 2077 Z-score: 2466.8 bits: 465.0 E(85289): 1.2e-130
Smith-Waterman score: 2077; 99.0% identity (99.0% similar) in 298 aa overlap (75-372:1-298)
50 60 70 80 90 100
pF1KA0 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ
::::::::::::::::::::::::::::::
XP_016 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQ
10 20 30
110 120 130 140 150 160
pF1KA0 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KA0 AVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KA0 LIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP
160 170 180 190 200 210
290 300 310 320 330 340
pF1KA0 AVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGG
220 230 240 250 260 270
350 360 370 380 390
pF1KA0 ALPMFELVEQQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
::::::::: ::::::::::::::: :
XP_016 ALPMFELVELQPSHLACPDVLNLSLGESCQVQVGSLGGTICALASPVLAPLVLTIKVCVS
280 290 300 310 320 330
>>XP_005247052 (OMIM: 611338) PREDICTED: cysteine protea (341 aa)
initn: 2077 init1: 2077 opt: 2077 Z-score: 2466.8 bits: 465.0 E(85289): 1.2e-130
Smith-Waterman score: 2077; 99.0% identity (99.0% similar) in 298 aa overlap (75-372:1-298)
50 60 70 80 90 100
pF1KA0 DVASRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQ
::::::::::::::::::::::::::::::
XP_005 MLRCGQMIFAQALVCRHLGRDWRWTQRKRQ
10 20 30
110 120 130 140 150 160
pF1KA0 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PDSYFSVLNAFIDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSL
40 50 60 70 80 90
170 180 190 200 210 220
pF1KA0 AVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVHIAMDNTVVMEEIRRLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVL
100 110 120 130 140 150
230 240 250 260 270 280
pF1KA0 LIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQP
160 170 180 190 200 210
290 300 310 320 330 340
pF1KA0 AVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AVEPTDGCFIPDESFHCQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGG
220 230 240 250 260 270
350 360 370 380 390
pF1KA0 ALPMFELVEQQPSHLACPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
::::::::: ::::::::::::::: :
XP_005 ALPMFELVELQPSHLACPDVLNLSLGESCQVQVGSLGGTICALASPVLAPLVLTIKVCVS
280 290 300 310 320 330
393 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 20:05:05 2016 done: Wed Nov 2 20:05:06 2016
Total Scan time: 8.450 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]