Result of FASTA (omim) for
pF1KA0937
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0937, 619 aa
1>>>pF1KA0937 619 - 619 aa - 619 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.9133+/-0.000358; mu= -1.6869+/- 0.022
mean_var=264.6305+/-54.070, 0's: 0 Z-trim(121.7): 46 B-trim: 0 in 0/61
Lambda= 0.078841
statistics sampled from 38669 (38715) to 38669 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.454), width: 16
Scan time: 11.060
The best scores are: opt bits E(85289)
NP_055992 (OMIM: 616110) E3 ubiquitin-protein liga ( 619) 4262 498.2 3.4e-140
XP_006718546 (OMIM: 616110) PREDICTED: E3 ubiquiti ( 513) 3508 412.4 1.9e-114
NP_001287656 (OMIM: 616110) E3 ubiquitin-protein l ( 513) 3508 412.4 1.9e-114
XP_011536311 (OMIM: 602582) PREDICTED: E3 ubiquiti ( 620) 1871 226.3 2.5e-58
NP_004407 (OMIM: 602582) E3 ubiquitin-protein liga ( 620) 1871 226.3 2.5e-58
XP_016867213 (OMIM: 613141) PREDICTED: probable E3 ( 622) 1316 163.2 2.5e-39
XP_005250188 (OMIM: 613141) PREDICTED: probable E3 ( 622) 1316 163.2 2.5e-39
XP_011514076 (OMIM: 613141) PREDICTED: probable E3 ( 622) 1316 163.2 2.5e-39
XP_016867214 (OMIM: 613141) PREDICTED: probable E3 ( 622) 1316 163.2 2.5e-39
XP_016867212 (OMIM: 613141) PREDICTED: probable E3 ( 622) 1316 163.2 2.5e-39
NP_001096065 (OMIM: 613141) probable E3 ubiquitin- ( 622) 1316 163.2 2.5e-39
NP_065943 (OMIM: 613141) probable E3 ubiquitin-pro ( 622) 1316 163.2 2.5e-39
XP_011514077 (OMIM: 613141) PREDICTED: probable E3 ( 622) 1316 163.2 2.5e-39
XP_011514075 (OMIM: 613141) PREDICTED: probable E3 ( 622) 1316 163.2 2.5e-39
XP_005250189 (OMIM: 613141) PREDICTED: probable E3 ( 622) 1316 163.2 2.5e-39
XP_011514074 (OMIM: 613141) PREDICTED: probable E3 ( 622) 1316 163.2 2.5e-39
NP_001096064 (OMIM: 613141) probable E3 ubiquitin- ( 622) 1316 163.2 2.5e-39
XP_016867215 (OMIM: 613141) PREDICTED: probable E3 ( 575) 1153 144.6 9.1e-34
XP_016867216 (OMIM: 613141) PREDICTED: probable E3 ( 575) 1153 144.6 9.1e-34
NP_001096066 (OMIM: 613141) probable E3 ubiquitin- ( 575) 1153 144.6 9.1e-34
XP_016867217 (OMIM: 613141) PREDICTED: probable E3 ( 568) 590 80.5 1.7e-14
NP_612144 (OMIM: 613143) E3 ubiquitin-protein liga ( 740) 508 71.3 1.3e-11
XP_016867219 (OMIM: 613141) PREDICTED: probable E3 ( 414) 502 70.4 1.4e-11
XP_016867218 (OMIM: 613141) PREDICTED: probable E3 ( 419) 502 70.4 1.4e-11
XP_011536324 (OMIM: 613142) PREDICTED: probable E3 ( 347) 424 61.5 5.6e-09
NP_001273175 (OMIM: 613142) probable E3 ubiquitin- ( 347) 424 61.5 5.6e-09
XP_005268760 (OMIM: 613142) PREDICTED: probable E3 ( 347) 424 61.5 5.6e-09
NP_848597 (OMIM: 613142) probable E3 ubiquitin-pro ( 347) 424 61.5 5.6e-09
XP_005268754 (OMIM: 613142) PREDICTED: probable E3 ( 350) 424 61.5 5.6e-09
XP_005268757 (OMIM: 613142) PREDICTED: probable E3 ( 350) 424 61.5 5.6e-09
XP_005268755 (OMIM: 613142) PREDICTED: probable E3 ( 350) 424 61.5 5.6e-09
NP_001273174 (OMIM: 613142) probable E3 ubiquitin- ( 350) 424 61.5 5.6e-09
>>NP_055992 (OMIM: 616110) E3 ubiquitin-protein ligase D (619 aa)
initn: 4262 init1: 4262 opt: 4262 Z-score: 2638.0 bits: 498.2 E(85289): 3.4e-140
Smith-Waterman score: 4262; 100.0% identity (100.0% similar) in 619 aa overlap (1-619:1-619)
10 20 30 40 50 60
pF1KA0 MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVVRAGPRAGGSVVLGQVDSRLAPYIIDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVVRAGPRAGGSVVLGQVDSRLAPYIIDL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 QSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGSWTPYDMEVGITIQHAYEKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGSWTPYDMEVGITIQHAYEKQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 HPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRRRLDLIYPMVTGTLPKAQSWPVSPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 HPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRRRLDLIYPMVTGTLPKAQSWPVSPGP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 ATSPPMSPCSCPQCVLVMSVKAAVVNGSTGPLQLPVTRKNMPPPGVVKLPPLPGSGAKPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ATSPPMSPCSCPQCVLVMSVKAAVVNGSTGPLQLPVTRKNMPPPGVVKLPPLPGSGAKPL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DSTGTIRGPLKTAPSQVIRRQASSMPTGTTMGSPASPPGPNSKTGRVALATLNRTNLQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DSTGTIRGPLKTAPSQVIRRQASSMPTGTTMGSPASPPGPNSKTGRVALATLNRTNLQRL
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 AIAQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AIAQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPP
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 VSKSEIKSIPGVSNTSRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLTAPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VSKSEIKSIPGVSNTSRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLTAPS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 GYKGPQPTVKPDLVGKLSRCGHVYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GYKGPQPTVKPDLVGKLSRCGHVYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 GKMEYHLIPHSLPGHPDCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GKMEYHLIPHSLPGHPDCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKG
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 RKVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 RKVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNV
550 560 570 580 590 600
610
pF1KA0 LAELAAQGISEDSTAQEKD
:::::::::::::::::::
NP_055 LAELAAQGISEDSTAQEKD
610
>>XP_006718546 (OMIM: 616110) PREDICTED: E3 ubiquitin-pr (513 aa)
initn: 3508 init1: 3508 opt: 3508 Z-score: 2175.6 bits: 412.4 E(85289): 1.9e-114
Smith-Waterman score: 3508; 100.0% identity (100.0% similar) in 513 aa overlap (107-619:1-513)
80 90 100 110 120 130
pF1KA0 RRNYYDPSSAPGKGVVWEWENDNGSWTPYDMEVGITIQHAYEKQHPWIDLTSIGFSYVID
::::::::::::::::::::::::::::::
XP_006 MEVGITIQHAYEKQHPWIDLTSIGFSYVID
10 20 30
140 150 160 170 180 190
pF1KA0 FNTMGQINRQTQRQRRVRRRLDLIYPMVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FNTMGQINRQTQRQRRVRRRLDLIYPMVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVL
40 50 60 70 80 90
200 210 220 230 240 250
pF1KA0 VMSVKAAVVNGSTGPLQLPVTRKNMPPPGVVKLPPLPGSGAKPLDSTGTIRGPLKTAPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VMSVKAAVVNGSTGPLQLPVTRKNMPPPGVVKLPPLPGSGAKPLDSTGTIRGPLKTAPSQ
100 110 120 130 140 150
260 270 280 290 300 310
pF1KA0 VIRRQASSMPTGTTMGSPASPPGPNSKTGRVALATLNRTNLQRLAIAQSRVLIASGVPTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VIRRQASSMPTGTTMGSPASPPGPNSKTGRVALATLNRTNLQRLAIAQSRVLIASGVPTV
160 170 180 190 200 210
320 330 340 350 360 370
pF1KA0 PVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTS
220 230 240 250 260 270
380 390 400 410 420 430
pF1KA0 RKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKGPQPTVKPDLVGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKGPQPTVKPDLVGK
280 290 300 310 320 330
440 450 460 470 480 490
pF1KA0 LSRCGHVYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LSRCGHVYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHP
340 350 360 370 380 390
500 510 520 530 540 550
pF1KA0 DCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLI
400 410 420 430 440 450
560 570 580 590 600 610
pF1KA0 FAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 FAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQ
460 470 480 490 500 510
pF1KA0 EKD
:::
XP_006 EKD
>>NP_001287656 (OMIM: 616110) E3 ubiquitin-protein ligas (513 aa)
initn: 3508 init1: 3508 opt: 3508 Z-score: 2175.6 bits: 412.4 E(85289): 1.9e-114
Smith-Waterman score: 3508; 100.0% identity (100.0% similar) in 513 aa overlap (107-619:1-513)
80 90 100 110 120 130
pF1KA0 RRNYYDPSSAPGKGVVWEWENDNGSWTPYDMEVGITIQHAYEKQHPWIDLTSIGFSYVID
::::::::::::::::::::::::::::::
NP_001 MEVGITIQHAYEKQHPWIDLTSIGFSYVID
10 20 30
140 150 160 170 180 190
pF1KA0 FNTMGQINRQTQRQRRVRRRLDLIYPMVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FNTMGQINRQTQRQRRVRRRLDLIYPMVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVL
40 50 60 70 80 90
200 210 220 230 240 250
pF1KA0 VMSVKAAVVNGSTGPLQLPVTRKNMPPPGVVKLPPLPGSGAKPLDSTGTIRGPLKTAPSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VMSVKAAVVNGSTGPLQLPVTRKNMPPPGVVKLPPLPGSGAKPLDSTGTIRGPLKTAPSQ
100 110 120 130 140 150
260 270 280 290 300 310
pF1KA0 VIRRQASSMPTGTTMGSPASPPGPNSKTGRVALATLNRTNLQRLAIAQSRVLIASGVPTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VIRRQASSMPTGTTMGSPASPPGPNSKTGRVALATLNRTNLQRLAIAQSRVLIASGVPTV
160 170 180 190 200 210
320 330 340 350 360 370
pF1KA0 PVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVKNLNGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTS
220 230 240 250 260 270
380 390 400 410 420 430
pF1KA0 RKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKGPQPTVKPDLVGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKGPQPTVKPDLVGK
280 290 300 310 320 330
440 450 460 470 480 490
pF1KA0 LSRCGHVYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSRCGHVYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHP
340 350 360 370 380 390
500 510 520 530 540 550
pF1KA0 DCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DCKTIRIIYSIPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLI
400 410 420 430 440 450
560 570 580 590 600 610
pF1KA0 FAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FAIGTSSTTGESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQ
460 470 480 490 500 510
pF1KA0 EKD
:::
NP_001 EKD
>>XP_011536311 (OMIM: 602582) PREDICTED: E3 ubiquitin-pr (620 aa)
initn: 2559 init1: 1130 opt: 1871 Z-score: 1168.2 bits: 226.3 E(85289): 2.5e-58
Smith-Waterman score: 2758; 64.9% identity (84.4% similar) in 610 aa overlap (7-611:25-615)
10 20 30 40
pF1KA0 MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVVRAGPRAGG
::::::::::.:::::. .: :::: :.. : :
XP_011 MSRPGHGGLMPVNGLGFPPQNVARVVVWEWLNEHSRWRPYTATVCHHIENVLKEDAR--G
10 20 30 40 50
50 60 70 80 90 100
pF1KA0 SVVLGQVDSRLAPYIIDLQSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGSW
::::::::..:.:::::::::.::::::::.::::::.::::::::::.:::::::.:.:
XP_011 SVVLGQVDAQLVPYIIDLQSMHQFRQDTGTMRPVRRNFYDPSSAPGKGIVWEWENDGGAW
60 70 80 90 100 110
110 120 130 140 150 160
pF1KA0 TPYDMEVGITIQHAYEKQHPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRRRLDLIYP
: :::.. ::::.::::::::.::.:.:: :.: ::.:.:.::::.:.::.:::::: ::
XP_011 TAYDMDICITIQNAYEKQHPWLDLSSLGFCYLIYFNSMSQMNRQTRRRRRLRRRLDLAYP
120 130 140 150 160 170
170 180 190 200 210 220
pF1KA0 MVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVLVMSVKAAVVNGSTGPLQLPVTRKNMP
...:..::.:::::. :.: .:::: ::.:: :..:: .. . : :.. :
XP_011 LTVGSIPKSQSWPVG---ASSG--QPCSCQQCLLVNSTRAA-----SNAI-LASQRRKAP
180 190 200 210 220
230 240 250 260 270
pF1KA0 PPGVVKLPPLPGS--GAKPLDSTGTIRGP-LKTAPSQVIRRQASSMPTGTTMGSPASPPG
: . :: ::. :: . ..:. : : .::. . : : :. ::..: :
XP_011 PAPPLPPPPPPGGPPGALAVRPSATFTGAALWAAPAAGPAEPAP--PPGAPPRSPGAPGG
230 240 250 260 270 280
280 290 300 310 320 330
pF1KA0 PNSKTGRVALATLNRTNLQRLAIAQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILM
. :. .::: . :: . ...:. : :::..:::::::..::.:::::.::::.
XP_011 ARTP-GQ---NNLNRPGPQRTTSVSARASIPPGVPALPVKNLNGTGPVHPALAGMTGILL
290 300 310 320 330 340
340 350 360 370 380 390
pF1KA0 SAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTSRKTTKKQAKKGKTPEEVLKKYLQ
:::::::::: :: .:::::::::..: .::: .. ::: ::. ::.:.::.:...:.:
XP_011 CAAGLPVCLTRAPKPILHPPPVSKSDVKPVPGVPGVCRKTKKKHLKKSKNPEDVVRRYMQ
350 360 370 380 390 400
400 410 420 430 440 450
pF1KA0 KVRHPPDEDCTICMERLTAPSGYKGP--QPTVKPDLVGKLSRCGHVYHIYCLVAMYNNGN
::..:::::::::::::.. :::.: . :.:.:::.:.::::.::. ::::::.:::
XP_011 KVKNPPDEDCTICMERLVTASGYEGVLRHKGVRPELVGRLGRCGHMYHLLCLVAMYSNGN
410 420 430 440 450 460
460 470 480 490 500 510
pF1KA0 KDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHPDCKTIRIIYSIPPGIQGPEHP
:::::::::::.::: :::::::::::.::::::::: :: .::::.:.:: ::::::::
XP_011 KDGSLQCPTCKAIYGEKTGTQPPGKMEFHLIPHSLPGFPDTQTIRIVYDIPTGIQGPEHP
470 480 490 500 510 520
520 530 540 550 560 570
pF1KA0 NPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVH
::::.:.:::::::::::..:::::::.::..::.:::::.::::.::::::::.:::.:
XP_011 NPGKKFTARGFPRHCYLPNNEKGRKVLRLLITAWERRLIFTIGTSNTTGESDTVVWNEIH
530 540 550 560 570 580
580 590 600 610
pF1KA0 HKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQEKD
:::::::::::::::::.:::::::::.:::.::
XP_011 HKTEFGSNLTGHGYPDASYLDNVLAELTAQGVSEAAAKA
590 600 610 620
>>NP_004407 (OMIM: 602582) E3 ubiquitin-protein ligase D (620 aa)
initn: 2559 init1: 1130 opt: 1871 Z-score: 1168.2 bits: 226.3 E(85289): 2.5e-58
Smith-Waterman score: 2758; 64.9% identity (84.4% similar) in 610 aa overlap (7-611:25-615)
10 20 30 40
pF1KA0 MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVVRAGPRAGG
::::::::::.:::::. .: :::: :.. : :
NP_004 MSRPGHGGLMPVNGLGFPPQNVARVVVWEWLNEHSRWRPYTATVCHHIENVLKEDAR--G
10 20 30 40 50
50 60 70 80 90 100
pF1KA0 SVVLGQVDSRLAPYIIDLQSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGSW
::::::::..:.:::::::::.::::::::.::::::.::::::::::.:::::::.:.:
NP_004 SVVLGQVDAQLVPYIIDLQSMHQFRQDTGTMRPVRRNFYDPSSAPGKGIVWEWENDGGAW
60 70 80 90 100 110
110 120 130 140 150 160
pF1KA0 TPYDMEVGITIQHAYEKQHPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRRRLDLIYP
: :::.. ::::.::::::::.::.:.:: :.: ::.:.:.::::.:.::.:::::: ::
NP_004 TAYDMDICITIQNAYEKQHPWLDLSSLGFCYLIYFNSMSQMNRQTRRRRRLRRRLDLAYP
120 130 140 150 160 170
170 180 190 200 210 220
pF1KA0 MVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVLVMSVKAAVVNGSTGPLQLPVTRKNMP
...:..::.:::::. :.: .:::: ::.:: :..:: .. . : :.. :
NP_004 LTVGSIPKSQSWPVG---ASSG--QPCSCQQCLLVNSTRAA-----SNAI-LASQRRKAP
180 190 200 210 220
230 240 250 260 270
pF1KA0 PPGVVKLPPLPGS--GAKPLDSTGTIRGP-LKTAPSQVIRRQASSMPTGTTMGSPASPPG
: . :: ::. :: . ..:. : : .::. . : : :. ::..: :
NP_004 PAPPLPPPPPPGGPPGALAVRPSATFTGAALWAAPAAGPAEPAP--PPGAPPRSPGAPGG
230 240 250 260 270 280
280 290 300 310 320 330
pF1KA0 PNSKTGRVALATLNRTNLQRLAIAQSRVLIASGVPTVPVKNLNGSSPVNPALAGITGILM
. :. .::: . :: . ...:. : :::..:::::::..::.:::::.::::.
NP_004 ARTP-GQ---NNLNRPGPQRTTSVSARASIPPGVPALPVKNLNGTGPVHPALAGMTGILL
290 300 310 320 330 340
340 350 360 370 380 390
pF1KA0 SAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTSRKTTKKQAKKGKTPEEVLKKYLQ
:::::::::: :: .:::::::::..: .::: .. ::: ::. ::.:.::.:...:.:
NP_004 CAAGLPVCLTRAPKPILHPPPVSKSDVKPVPGVPGVCRKTKKKHLKKSKNPEDVVRRYMQ
350 360 370 380 390 400
400 410 420 430 440 450
pF1KA0 KVRHPPDEDCTICMERLTAPSGYKGP--QPTVKPDLVGKLSRCGHVYHIYCLVAMYNNGN
::..:::::::::::::.. :::.: . :.:.:::.:.::::.::. ::::::.:::
NP_004 KVKNPPDEDCTICMERLVTASGYEGVLRHKGVRPELVGRLGRCGHMYHLLCLVAMYSNGN
410 420 430 440 450 460
460 470 480 490 500 510
pF1KA0 KDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHPDCKTIRIIYSIPPGIQGPEHP
:::::::::::.::: :::::::::::.::::::::: :: .::::.:.:: ::::::::
NP_004 KDGSLQCPTCKAIYGEKTGTQPPGKMEFHLIPHSLPGFPDTQTIRIVYDIPTGIQGPEHP
470 480 490 500 510 520
520 530 540 550 560 570
pF1KA0 NPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEVH
::::.:.:::::::::::..:::::::.::..::.:::::.::::.::::::::.:::.:
NP_004 NPGKKFTARGFPRHCYLPNNEKGRKVLRLLITAWERRLIFTIGTSNTTGESDTVVWNEIH
530 540 550 560 570 580
580 590 600 610
pF1KA0 HKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQEKD
:::::::::::::::::.:::::::::.:::.::
NP_004 HKTEFGSNLTGHGYPDASYLDNVLAELTAQGVSEAAAKA
590 600 610 620
>>XP_016867213 (OMIM: 613141) PREDICTED: probable E3 ubi (622 aa)
initn: 1763 init1: 984 opt: 1316 Z-score: 827.0 bits: 163.2 E(85289): 2.5e-39
Smith-Waterman score: 1763; 46.9% identity (67.1% similar) in 635 aa overlap (5-617:17-622)
10 20 30 40
pF1KA0 MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEA--VVRAGPRAG-GSVV
.::.:::: . : :.::: .: :: : . : : : ::..
XP_016 MAMAPSPSLVQVYTSPAAVAVWEWQDGLGTWHPYSATVCSFIEQQFVQQKGQRFGLGSLA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA0 ----LGQVDSRLAPYIIDLQSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGS
:::.: :::::::: : .::::::::.: :::. . ::::.:::::: .:.::
XP_016 HSIPLGQADPSLAPYIIDLPSWTQFRQDTGTMRAVRRHLFPQHSAPGRGVVWEWLSDDGS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA0 WTPYDMEVGITIQHAYEKQHPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRRRLDLIY
:: :. : ... . . .::. .:..:.....: : :. .. : :::. :
XP_016 WTAYEASVCDYLEQQVARGNQLVDLAPLGYNYTVNYTTHTQTNKTSSFCRSVRRQAGPPY
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA0 PMVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVLVMSVKAAVVNGS-TGPLQLPVTRKN
:..: : : : : ::: ::. .:: :::.. :..
XP_016 PVTTIIAP-----PGHTGVA-------CSCHQCL----------SGSRTGPVS-GRYRHS
190 200 210
230 240 250 260 270 280
pF1KA0 MPPPGVVKLPPLPGSGAKPLDSTGTIRGPLKTAPSQVIRRQASSMPTGTTMGSPASPPGP
: . .: : . . .: .: . :: :.: . : .. : :.::.
XP_016 MTNLPAYPVPQHPPHRTASVFGTHQAFAPYNK-PSLSGARSAPRLNTTNAWG--AAPPSL
220 230 240 250 260 270
290 300 310 320
pF1KA0 NSKT-GRVALATLNRTNLQRLAIAQSRVL--IASG-------VP-TVPVKNLNGSSPVNP
.:. : .:. :. .: . ... : . :: :: :::.. . : :.
XP_016 GSQPLYRSSLSHLGPQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQ-MPKPSRVQQ
280 290 300 310 320 330
330 340 350 360 370 380
pF1KA0 ALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTSRKTTKKQAKKGKT
::::.:..:::: ::::::.: :. . ::.:. :: .:. . ..: . : .
XP_016 ALAGMTSVLMSAIGLPVCLSRAPQPT--SPPASRLASKSHGSVKRLRKMSVKGATPKPEP
340 350 360 370 380 390
390 400 410 420 430 440
pF1KA0 -PEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKG--PQPTVKPDLVGKLSRCGHVYHI
::.:.:.: .... :::::: ::::.:.. :::. . .. ::.:..:.:..:.
XP_016 EPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHL
400 410 420 430 440 450
450 460 470 480 490 500
pF1KA0 YCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHPDCKTIRIIYS
::.::: :::::::::::.:::::: :::::: :::: . ::::: :: :: :.::
XP_016 LCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYS
460 470 480 490 500 510
510 520 530 540 550 560
pF1KA0 IPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTG
:: :::::::::::: :.::::::.:::::. .:::::.:: ::: :::::..:::::::
XP_016 IPHGIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTG
520 530 540 550 560 570
570 580 590 600 610
pF1KA0 ESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQEKD
:.:::.:::.:::::. :.::::::: :::.::::::::::..:: :.
XP_016 ETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQQ
580 590 600 610 620
>>XP_005250188 (OMIM: 613141) PREDICTED: probable E3 ubi (622 aa)
initn: 1763 init1: 984 opt: 1316 Z-score: 827.0 bits: 163.2 E(85289): 2.5e-39
Smith-Waterman score: 1763; 46.9% identity (67.1% similar) in 635 aa overlap (5-617:17-622)
10 20 30 40
pF1KA0 MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEA--VVRAGPRAG-GSVV
.::.:::: . : :.::: .: :: : . : : : ::..
XP_005 MAMAPSPSLVQVYTSPAAVAVWEWQDGLGTWHPYSATVCSFIEQQFVQQKGQRFGLGSLA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA0 ----LGQVDSRLAPYIIDLQSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGS
:::.: :::::::: : .::::::::.: :::. . ::::.:::::: .:.::
XP_005 HSIPLGQADPSLAPYIIDLPSWTQFRQDTGTMRAVRRHLFPQHSAPGRGVVWEWLSDDGS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA0 WTPYDMEVGITIQHAYEKQHPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRRRLDLIY
:: :. : ... . . .::. .:..:.....: : :. .. : :::. :
XP_005 WTAYEASVCDYLEQQVARGNQLVDLAPLGYNYTVNYTTHTQTNKTSSFCRSVRRQAGPPY
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA0 PMVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVLVMSVKAAVVNGS-TGPLQLPVTRKN
:..: : : : : ::: ::. .:: :::.. :..
XP_005 PVTTIIAP-----PGHTGVA-------CSCHQCL----------SGSRTGPVS-GRYRHS
190 200 210
230 240 250 260 270 280
pF1KA0 MPPPGVVKLPPLPGSGAKPLDSTGTIRGPLKTAPSQVIRRQASSMPTGTTMGSPASPPGP
: . .: : . . .: .: . :: :.: . : .. : :.::.
XP_005 MTNLPAYPVPQHPPHRTASVFGTHQAFAPYNK-PSLSGARSAPRLNTTNAWG--AAPPSL
220 230 240 250 260 270
290 300 310 320
pF1KA0 NSKT-GRVALATLNRTNLQRLAIAQSRVL--IASG-------VP-TVPVKNLNGSSPVNP
.:. : .:. :. .: . ... : . :: :: :::.. . : :.
XP_005 GSQPLYRSSLSHLGPQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQ-MPKPSRVQQ
280 290 300 310 320 330
330 340 350 360 370 380
pF1KA0 ALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTSRKTTKKQAKKGKT
::::.:..:::: ::::::.: :. . ::.:. :: .:. . ..: . : .
XP_005 ALAGMTSVLMSAIGLPVCLSRAPQPT--SPPASRLASKSHGSVKRLRKMSVKGATPKPEP
340 350 360 370 380 390
390 400 410 420 430 440
pF1KA0 -PEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKG--PQPTVKPDLVGKLSRCGHVYHI
::.:.:.: .... :::::: ::::.:.. :::. . .. ::.:..:.:..:.
XP_005 EPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHL
400 410 420 430 440 450
450 460 470 480 490 500
pF1KA0 YCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHPDCKTIRIIYS
::.::: :::::::::::.:::::: :::::: :::: . ::::: :: :: :.::
XP_005 LCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYS
460 470 480 490 500 510
510 520 530 540 550 560
pF1KA0 IPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTG
:: :::::::::::: :.::::::.:::::. .:::::.:: ::: :::::..:::::::
XP_005 IPHGIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTG
520 530 540 550 560 570
570 580 590 600 610
pF1KA0 ESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQEKD
:.:::.:::.:::::. :.::::::: :::.::::::::::..:: :.
XP_005 ETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQQ
580 590 600 610 620
>>XP_011514076 (OMIM: 613141) PREDICTED: probable E3 ubi (622 aa)
initn: 1763 init1: 984 opt: 1316 Z-score: 827.0 bits: 163.2 E(85289): 2.5e-39
Smith-Waterman score: 1763; 46.9% identity (67.1% similar) in 635 aa overlap (5-617:17-622)
10 20 30 40
pF1KA0 MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEA--VVRAGPRAG-GSVV
.::.:::: . : :.::: .: :: : . : : : ::..
XP_011 MAMAPSPSLVQVYTSPAAVAVWEWQDGLGTWHPYSATVCSFIEQQFVQQKGQRFGLGSLA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA0 ----LGQVDSRLAPYIIDLQSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGS
:::.: :::::::: : .::::::::.: :::. . ::::.:::::: .:.::
XP_011 HSIPLGQADPSLAPYIIDLPSWTQFRQDTGTMRAVRRHLFPQHSAPGRGVVWEWLSDDGS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA0 WTPYDMEVGITIQHAYEKQHPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRRRLDLIY
:: :. : ... . . .::. .:..:.....: : :. .. : :::. :
XP_011 WTAYEASVCDYLEQQVARGNQLVDLAPLGYNYTVNYTTHTQTNKTSSFCRSVRRQAGPPY
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA0 PMVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVLVMSVKAAVVNGS-TGPLQLPVTRKN
:..: : : : : ::: ::. .:: :::.. :..
XP_011 PVTTIIAP-----PGHTGVA-------CSCHQCL----------SGSRTGPVS-GRYRHS
190 200 210
230 240 250 260 270 280
pF1KA0 MPPPGVVKLPPLPGSGAKPLDSTGTIRGPLKTAPSQVIRRQASSMPTGTTMGSPASPPGP
: . .: : . . .: .: . :: :.: . : .. : :.::.
XP_011 MTNLPAYPVPQHPPHRTASVFGTHQAFAPYNK-PSLSGARSAPRLNTTNAWG--AAPPSL
220 230 240 250 260 270
290 300 310 320
pF1KA0 NSKT-GRVALATLNRTNLQRLAIAQSRVL--IASG-------VP-TVPVKNLNGSSPVNP
.:. : .:. :. .: . ... : . :: :: :::.. . : :.
XP_011 GSQPLYRSSLSHLGPQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQ-MPKPSRVQQ
280 290 300 310 320 330
330 340 350 360 370 380
pF1KA0 ALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTSRKTTKKQAKKGKT
::::.:..:::: ::::::.: :. . ::.:. :: .:. . ..: . : .
XP_011 ALAGMTSVLMSAIGLPVCLSRAPQPT--SPPASRLASKSHGSVKRLRKMSVKGATPKPEP
340 350 360 370 380 390
390 400 410 420 430 440
pF1KA0 -PEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKG--PQPTVKPDLVGKLSRCGHVYHI
::.:.:.: .... :::::: ::::.:.. :::. . .. ::.:..:.:..:.
XP_011 EPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHL
400 410 420 430 440 450
450 460 470 480 490 500
pF1KA0 YCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHPDCKTIRIIYS
::.::: :::::::::::.:::::: :::::: :::: . ::::: :: :: :.::
XP_011 LCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYS
460 470 480 490 500 510
510 520 530 540 550 560
pF1KA0 IPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTG
:: :::::::::::: :.::::::.:::::. .:::::.:: ::: :::::..:::::::
XP_011 IPHGIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTG
520 530 540 550 560 570
570 580 590 600 610
pF1KA0 ESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQEKD
:.:::.:::.:::::. :.::::::: :::.::::::::::..:: :.
XP_011 ETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQQ
580 590 600 610 620
>>XP_016867214 (OMIM: 613141) PREDICTED: probable E3 ubi (622 aa)
initn: 1763 init1: 984 opt: 1316 Z-score: 827.0 bits: 163.2 E(85289): 2.5e-39
Smith-Waterman score: 1763; 46.9% identity (67.1% similar) in 635 aa overlap (5-617:17-622)
10 20 30 40
pF1KA0 MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEA--VVRAGPRAG-GSVV
.::.:::: . : :.::: .: :: : . : : : ::..
XP_016 MAMAPSPSLVQVYTSPAAVAVWEWQDGLGTWHPYSATVCSFIEQQFVQQKGQRFGLGSLA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA0 ----LGQVDSRLAPYIIDLQSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGS
:::.: :::::::: : .::::::::.: :::. . ::::.:::::: .:.::
XP_016 HSIPLGQADPSLAPYIIDLPSWTQFRQDTGTMRAVRRHLFPQHSAPGRGVVWEWLSDDGS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA0 WTPYDMEVGITIQHAYEKQHPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRRRLDLIY
:: :. : ... . . .::. .:..:.....: : :. .. : :::. :
XP_016 WTAYEASVCDYLEQQVARGNQLVDLAPLGYNYTVNYTTHTQTNKTSSFCRSVRRQAGPPY
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA0 PMVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVLVMSVKAAVVNGS-TGPLQLPVTRKN
:..: : : : : ::: ::. .:: :::.. :..
XP_016 PVTTIIAP-----PGHTGVA-------CSCHQCL----------SGSRTGPVS-GRYRHS
190 200 210
230 240 250 260 270 280
pF1KA0 MPPPGVVKLPPLPGSGAKPLDSTGTIRGPLKTAPSQVIRRQASSMPTGTTMGSPASPPGP
: . .: : . . .: .: . :: :.: . : .. : :.::.
XP_016 MTNLPAYPVPQHPPHRTASVFGTHQAFAPYNK-PSLSGARSAPRLNTTNAWG--AAPPSL
220 230 240 250 260 270
290 300 310 320
pF1KA0 NSKT-GRVALATLNRTNLQRLAIAQSRVL--IASG-------VP-TVPVKNLNGSSPVNP
.:. : .:. :. .: . ... : . :: :: :::.. . : :.
XP_016 GSQPLYRSSLSHLGPQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQ-MPKPSRVQQ
280 290 300 310 320 330
330 340 350 360 370 380
pF1KA0 ALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTSRKTTKKQAKKGKT
::::.:..:::: ::::::.: :. . ::.:. :: .:. . ..: . : .
XP_016 ALAGMTSVLMSAIGLPVCLSRAPQPT--SPPASRLASKSHGSVKRLRKMSVKGATPKPEP
340 350 360 370 380 390
390 400 410 420 430 440
pF1KA0 -PEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKG--PQPTVKPDLVGKLSRCGHVYHI
::.:.:.: .... :::::: ::::.:.. :::. . .. ::.:..:.:..:.
XP_016 EPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHL
400 410 420 430 440 450
450 460 470 480 490 500
pF1KA0 YCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHPDCKTIRIIYS
::.::: :::::::::::.:::::: :::::: :::: . ::::: :: :: :.::
XP_016 LCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYS
460 470 480 490 500 510
510 520 530 540 550 560
pF1KA0 IPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTG
:: :::::::::::: :.::::::.:::::. .:::::.:: ::: :::::..:::::::
XP_016 IPHGIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTG
520 530 540 550 560 570
570 580 590 600 610
pF1KA0 ESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQEKD
:.:::.:::.:::::. :.::::::: :::.::::::::::..:: :.
XP_016 ETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQQ
580 590 600 610 620
>>XP_016867212 (OMIM: 613141) PREDICTED: probable E3 ubi (622 aa)
initn: 1763 init1: 984 opt: 1316 Z-score: 827.0 bits: 163.2 E(85289): 2.5e-39
Smith-Waterman score: 1763; 46.9% identity (67.1% similar) in 635 aa overlap (5-617:17-622)
10 20 30 40
pF1KA0 MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEA--VVRAGPRAG-GSVV
.::.:::: . : :.::: .: :: : . : : : ::..
XP_016 MAMAPSPSLVQVYTSPAAVAVWEWQDGLGTWHPYSATVCSFIEQQFVQQKGQRFGLGSLA
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA0 ----LGQVDSRLAPYIIDLQSMNQFRQDTGTLRPVRRNYYDPSSAPGKGVVWEWENDNGS
:::.: :::::::: : .::::::::.: :::. . ::::.:::::: .:.::
XP_016 HSIPLGQADPSLAPYIIDLPSWTQFRQDTGTMRAVRRHLFPQHSAPGRGVVWEWLSDDGS
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA0 WTPYDMEVGITIQHAYEKQHPWIDLTSIGFSYVIDFNTMGQINRQTQRQRRVRRRLDLIY
:: :. : ... . . .::. .:..:.....: : :. .. : :::. :
XP_016 WTAYEASVCDYLEQQVARGNQLVDLAPLGYNYTVNYTTHTQTNKTSSFCRSVRRQAGPPY
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA0 PMVTGTLPKAQSWPVSPGPATSPPMSPCSCPQCVLVMSVKAAVVNGS-TGPLQLPVTRKN
:..: : : : : ::: ::. .:: :::.. :..
XP_016 PVTTIIAP-----PGHTGVA-------CSCHQCL----------SGSRTGPVS-GRYRHS
190 200 210
230 240 250 260 270 280
pF1KA0 MPPPGVVKLPPLPGSGAKPLDSTGTIRGPLKTAPSQVIRRQASSMPTGTTMGSPASPPGP
: . .: : . . .: .: . :: :.: . : .. : :.::.
XP_016 MTNLPAYPVPQHPPHRTASVFGTHQAFAPYNK-PSLSGARSAPRLNTTNAWG--AAPPSL
220 230 240 250 260 270
290 300 310 320
pF1KA0 NSKT-GRVALATLNRTNLQRLAIAQSRVL--IASG-------VP-TVPVKNLNGSSPVNP
.:. : .:. :. .: . ... : . :: :: :::.. . : :.
XP_016 GSQPLYRSSLSHLGPQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQ-MPKPSRVQQ
280 290 300 310 320 330
330 340 350 360 370 380
pF1KA0 ALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSEIKSIPGVSNTSRKTTKKQAKKGKT
::::.:..:::: ::::::.: :. . ::.:. :: .:. . ..: . : .
XP_016 ALAGMTSVLMSAIGLPVCLSRAPQPT--SPPASRLASKSHGSVKRLRKMSVKGATPKPEP
340 350 360 370 380 390
390 400 410 420 430 440
pF1KA0 -PEEVLKKYLQKVRHPPDEDCTICMERLTAPSGYKG--PQPTVKPDLVGKLSRCGHVYHI
::.:.:.: .... :::::: ::::.:.. :::. . .. ::.:..:.:..:.
XP_016 EPEQVIKNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHL
400 410 420 430 440 450
450 460 470 480 490 500
pF1KA0 YCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKMEYHLIPHSLPGHPDCKTIRIIYS
::.::: :::::::::::.:::::: :::::: :::: . ::::: :: :: :.::
XP_016 LCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYS
460 470 480 490 500 510
510 520 530 540 550 560
pF1KA0 IPPGIQGPEHPNPGKSFSARGFPRHCYLPDSEKGRKVLKLLLVAWDRRLIFAIGTSSTTG
:: :::::::::::: :.::::::.:::::. .:::::.:: ::: :::::..:::::::
XP_016 IPHGIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTG
520 530 540 550 560 570
570 580 590 600 610
pF1KA0 ESDTVIWNEVHHKTEFGSNLTGHGYPDANYLDNVLAELAAQGISEDSTAQEKD
:.:::.:::.:::::. :.::::::: :::.::::::::::..:: :.
XP_016 ETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQQ
580 590 600 610 620
619 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 20:03:35 2016 done: Wed Nov 2 20:03:36 2016
Total Scan time: 11.060 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]