Result of FASTA (ccds) for
pF1KA0910
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0910, 1279 aa
1>>>pF1KA0910 1279 - 1279 aa - 1279 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 16.1868+/-0.00147; mu= -23.4009+/- 0.089
mean_var=779.0441+/-158.754, 0's: 0 Z-trim(114.2): 51 B-trim: 0 in 0/54
Lambda= 0.045951
statistics sampled from 14710 (14753) to 14710 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.453), width: 16
Scan time: 5.360
The best scores are: opt bits E(32554)
CCDS54483.1 SYNJ1 gene_id:8867|Hs108|chr21 (1295) 7380 505.7 3.1e-142
CCDS33540.2 SYNJ1 gene_id:8867|Hs108|chr21 (1350) 7376 505.5 3.8e-142
CCDS33539.2 SYNJ1 gene_id:8867|Hs108|chr21 (1612) 7376 505.6 4.4e-142
CCDS54484.1 SYNJ1 gene_id:8867|Hs108|chr21 (1526) 7304 500.8 1.1e-140
CCDS5254.1 SYNJ2 gene_id:8871|Hs108|chr6 (1496) 3811 269.2 5.8e-71
>>CCDS54483.1 SYNJ1 gene_id:8867|Hs108|chr21 (1295 aa)
initn: 7284 init1: 7229 opt: 7380 Z-score: 2667.1 bits: 505.7 E(32554): 3.1e-142
Smith-Waterman score: 8484; 98.8% identity (98.8% similar) in 1295 aa overlap (1-1279:1-1295)
10 20 30 40 50 60
pF1KA0 MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 GLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRIDSSDEDRISEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRIDSSDEDRISEVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 KVLNSGNFYFAWSASGISLDLSLNAHRSMQEQTTDNRFFWNQSLHLHLKHYGVNCDDWLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KVLNSGNFYFAWSASGISLDLSLNAHRSMQEQTTDNRFFWNQSLHLHLKHYGVNCDDWLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 LLGSKEGEHMLSKAFQSHLKASEHAADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LLGSKEGEHMLSKAFQSHLKASEHAADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 YGFFYFNGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKPQLVTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 YGFFYFNGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKPQLVTR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 FQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAIDVLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 FQEVFRSMWSVNGDSISKIYAGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAIDVLL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 LGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKIRVCVGTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKIRVCVGTW
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 NVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNAGNI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNAGNI
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 VSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKT
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 GMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFIEIARKLSFPMGRMLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFIEIARKLSFPMGRMLF
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 SHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQVFRGFLEGKVTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 SHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQVFRGFLEGKVTF
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 APTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 APTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 WTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPDGTVLVSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 WTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPDGTVLVSI
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 KSSLPENNFFDDALIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGKELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KSSLPENNFFDDALIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGKELL
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 NRTITIALKSPDWIKNLEEEMSLEKISIALPSSTSSTLLGEDAEVAADFDMEGDVDDYSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 NRTITIALKSPDWIKNLEEEMSLEKISIALPSSTSSTLLGEDAEVAADFDMEGDVDDYSA
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 EVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPS
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120
pF1KA0 AQSSPIDAQPATP----------------PPRPVAPPTRPAPPQRPPPPSGARSPAPTRK
::::::::::::: :::::::::::::::::::::::::::::::
CCDS54 AQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRK
1090 1100 1110 1120 1130 1140
1130 1140 1150 1160 1170 1180
pF1KA0 EFGAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EFGAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASA
1150 1160 1170 1180 1190 1200
1190 1200 1210 1220 1230 1240
pF1KA0 GRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGP
1210 1220 1230 1240 1250 1260
1250 1260 1270
pF1KA0 QPNLETPPQPPPRSRSSHSLPSEASSQPQQEQPSG
:::::::::::::::::::::::::::::::::::
CCDS54 QPNLETPPQPPPRSRSSHSLPSEASSQPQQEQPSG
1270 1280 1290
>>CCDS33540.2 SYNJ1 gene_id:8867|Hs108|chr21 (1350 aa)
initn: 7229 init1: 7229 opt: 7376 Z-score: 2665.4 bits: 505.5 E(32554): 3.8e-142
Smith-Waterman score: 8442; 97.6% identity (97.6% similar) in 1311 aa overlap (1-1279:40-1350)
10 20 30
pF1KA0 MAFSKGFRIYHKLDPPPFSLIVETRHKEEC
::::::::::::::::::::::::::::::
CCDS33 GSDAPGGCGGGCGRRRRRSRRKRAASEERRMAFSKGFRIYHKLDPPPFSLIVETRHKEEC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA0 LMFESGAVAVLSSAEKEAIKGTYSKVLDAYGLLGVLRLNLGDTMLHYLVLVTGCMSVGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LMFESGAVAVLSSAEKEAIKGTYSKVLDAYGLLGVLRLNLGDTMLHYLVLVTGCMSVGKI
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA0 QESEVFRVTSTEFISLRIDSSDEDRISEVRKVLNSGNFYFAWSASGISLDLSLNAHRSMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QESEVFRVTSTEFISLRIDSSDEDRISEVRKVLNSGNFYFAWSASGISLDLSLNAHRSMQ
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA0 EQTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EQTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCE
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA0 RAGTRFNVRGTNDDGHVANFVETEQVVYLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RAGTRFNVRGTNDDGHVANFVETEQVVYLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVR
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA0 MSRGFEANAPAFDRHFRTLKNLYGKQIIVNLLGSKEGEHMLSKAFQSHLKASEHAADIQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MSRGFEANAPAFDRHFRTLKNLYGKQIIVNLLGSKEGEHMLSKAFQSHLKASEHAADIQM
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA0 VNFDYHQMVKGGKAEKLHSVLKPQVQKFLDYGFFYFNGSEVQRCQSGTVRTNCLDCLDRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VNFDYHQMVKGGKAEKLHSVLKPQVQKFLDYGFFYFNGSEVQRCQSGTVRTNCLDCLDRT
370 380 390 400 410 420
400 410 420 430 440 450
pF1KA0 NSVQAFLGLEMLAKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIYAGTGALEGKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NSVQAFLGLEMLAKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIYAGTGALEGKA
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA0 KLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTGSLRVSEQTLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTGSLRVSEQTLQ
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA0 SASSKVLKSMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SASSKVLKSMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAG
550 560 570 580 590 600
580 590 600 610 620 630
pF1KA0 IQEFQDKRSKPTDIFAIGFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 IQEFQDKRSKPTDIFAIGFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLAS
610 620 630 640 650 660
640 650 660 670 680 690
pF1KA0 EQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHF
670 680 690 700 710 720
700 710 720 730 740 750
pF1KA0 AAGQSQVKERNEDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AAGQSQVKERNEDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQN
730 740 750 760 770 780
760 770 780 790 800 810
pF1KA0 WDSLIAGDQLINQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 WDSLIAGDQLINQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLW
790 800 810 820 830 840
820 830 840 850 860 870
pF1KA0 RRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALIDIDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALIDIDI
850 860 870 880 890 900
880 890 900 910 920 930
pF1KA0 FEVEAEERQNIYKEVIAVQGPPDGTVLVSIKSSLPENNFFDDALIDELLQQFASFGEVIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FEVEAEERQNIYKEVIAVQGPPDGTVLVSIKSSLPENNFFDDALIDELLQQFASFGEVIL
910 920 930 940 950 960
940 950 960 970 980 990
pF1KA0 IRFVEDKMWVTFLEGSSALNVLSLNGKELLNRTITIALKSPDWIKNLEEEMSLEKISIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 IRFVEDKMWVTFLEGSSALNVLSLNGKELLNRTITIALKSPDWIKNLEEEMSLEKISIAL
970 980 990 1000 1010 1020
1000 1010 1020 1030 1040 1050
pF1KA0 PSSTSSTLLGEDAEVAADFDMEGDVDDYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PSSTSSTLLGEDAEVAADFDMEGDVDDYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSP
1030 1040 1050 1060 1070 1080
1060 1070 1080 1090
pF1KA0 CQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATP----------------P
::::::::::::::::::::::::::::::::::::::::::: :
CCDS33 CQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP
1090 1100 1110 1120 1130 1140
1100 1110 1120 1130
pF1KA0 PRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFG----------------APKSPGTTRKD
::::::::::::::::::::::::::::::::: :::::::::::
CCDS33 PRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKD
1150 1160 1170 1180 1190 1200
1140 1150 1160 1170 1180 1190
pF1KA0 NIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSET
1210 1220 1230 1240 1250 1260
1200 1210 1220 1230 1240 1250
pF1KA0 SKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRS
1270 1280 1290 1300 1310 1320
1260 1270
pF1KA0 RSSHSLPSEASSQPQQEQPSG
:::::::::::::::::::::
CCDS33 RSSHSLPSEASSQPQQEQPSG
1330 1340 1350
>>CCDS33539.2 SYNJ1 gene_id:8867|Hs108|chr21 (1612 aa)
initn: 7229 init1: 7229 opt: 7376 Z-score: 2664.4 bits: 505.6 E(32554): 4.4e-142
Smith-Waterman score: 8399; 97.5% identity (97.5% similar) in 1305 aa overlap (1-1273:40-1344)
10 20 30
pF1KA0 MAFSKGFRIYHKLDPPPFSLIVETRHKEEC
::::::::::::::::::::::::::::::
CCDS33 GSDAPGGCGGGCGRRRRRSRRKRAASEERRMAFSKGFRIYHKLDPPPFSLIVETRHKEEC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA0 LMFESGAVAVLSSAEKEAIKGTYSKVLDAYGLLGVLRLNLGDTMLHYLVLVTGCMSVGKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 LMFESGAVAVLSSAEKEAIKGTYSKVLDAYGLLGVLRLNLGDTMLHYLVLVTGCMSVGKI
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA0 QESEVFRVTSTEFISLRIDSSDEDRISEVRKVLNSGNFYFAWSASGISLDLSLNAHRSMQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 QESEVFRVTSTEFISLRIDSSDEDRISEVRKVLNSGNFYFAWSASGISLDLSLNAHRSMQ
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA0 EQTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EQTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAKACLISRLSCE
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA0 RAGTRFNVRGTNDDGHVANFVETEQVVYLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RAGTRFNVRGTNDDGHVANFVETEQVVYLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVR
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA0 MSRGFEANAPAFDRHFRTLKNLYGKQIIVNLLGSKEGEHMLSKAFQSHLKASEHAADIQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MSRGFEANAPAFDRHFRTLKNLYGKQIIVNLLGSKEGEHMLSKAFQSHLKASEHAADIQM
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA0 VNFDYHQMVKGGKAEKLHSVLKPQVQKFLDYGFFYFNGSEVQRCQSGTVRTNCLDCLDRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 VNFDYHQMVKGGKAEKLHSVLKPQVQKFLDYGFFYFNGSEVQRCQSGTVRTNCLDCLDRT
370 380 390 400 410 420
400 410 420 430 440 450
pF1KA0 NSVQAFLGLEMLAKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIYAGTGALEGKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NSVQAFLGLEMLAKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIYAGTGALEGKA
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA0 KLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTGSLRVSEQTLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTGSLRVSEQTLQ
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA0 SASSKVLKSMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SASSKVLKSMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAG
550 560 570 580 590 600
580 590 600 610 620 630
pF1KA0 IQEFQDKRSKPTDIFAIGFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 IQEFQDKRSKPTDIFAIGFEEMVELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLAS
610 620 630 640 650 660
640 650 660 670 680 690
pF1KA0 EQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHF
670 680 690 700 710 720
700 710 720 730 740 750
pF1KA0 AAGQSQVKERNEDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AAGQSQVKERNEDFIEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQN
730 740 750 760 770 780
760 770 780 790 800 810
pF1KA0 WDSLIAGDQLINQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 WDSLIAGDQLINQKNAGQVFRGFLEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLW
790 800 810 820 830 840
820 830 840 850 860 870
pF1KA0 RRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALIDIDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 RRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALIDIDI
850 860 870 880 890 900
880 890 900 910 920 930
pF1KA0 FEVEAEERQNIYKEVIAVQGPPDGTVLVSIKSSLPENNFFDDALIDELLQQFASFGEVIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 FEVEAEERQNIYKEVIAVQGPPDGTVLVSIKSSLPENNFFDDALIDELLQQFASFGEVIL
910 920 930 940 950 960
940 950 960 970 980 990
pF1KA0 IRFVEDKMWVTFLEGSSALNVLSLNGKELLNRTITIALKSPDWIKNLEEEMSLEKISIAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 IRFVEDKMWVTFLEGSSALNVLSLNGKELLNRTITIALKSPDWIKNLEEEMSLEKISIAL
970 980 990 1000 1010 1020
1000 1010 1020 1030 1040 1050
pF1KA0 PSSTSSTLLGEDAEVAADFDMEGDVDDYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 PSSTSSTLLGEDAEVAADFDMEGDVDDYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSP
1030 1040 1050 1060 1070 1080
1060 1070 1080 1090
pF1KA0 CQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATP----------------P
::::::::::::::::::::::::::::::::::::::::::: :
CCDS33 CQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPP
1090 1100 1110 1120 1130 1140
1100 1110 1120 1130
pF1KA0 PRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFG----------------APKSPGTTRKD
::::::::::::::::::::::::::::::::: :::::::::::
CCDS33 PRPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVARREMEAPKSPGTTRKD
1150 1160 1170 1180 1190 1200
1140 1150 1160 1170 1180 1190
pF1KA0 NIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 NIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPESQSKTSET
1210 1220 1230 1240 1250 1260
1200 1210 1220 1230 1240 1250
pF1KA0 SKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 SKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETPPQPPPRS
1270 1280 1290 1300 1310 1320
1260 1270
pF1KA0 RSSHSLPSEASSQPQQEQPSG
:::::::::::::::
CCDS33 RSSHSLPSEASSQPQVKTNGISDGKRESPLKIDPFEDLSFNLLAVSKAQLSVQTSPVPTP
1330 1340 1350 1360 1370 1380
>>CCDS54484.1 SYNJ1 gene_id:8867|Hs108|chr21 (1526 aa)
initn: 7753 init1: 3878 opt: 7304 Z-score: 2638.9 bits: 500.8 E(32554): 1.1e-140
Smith-Waterman score: 8115; 95.9% identity (95.9% similar) in 1292 aa overlap (1-1273:1-1258)
10 20 30 40 50 60
pF1KA0 MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDAY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 GLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRIDSSDEDRISEVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRIDSSDEDRISEVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 KVLNSGNFYFAWSASGISLDLSLNAHRSMQEQTTDNRFFWNQSLHLHLKHYGVNCDDWLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KVLNSGNFYFAWSASGISLDLSLNAHRSMQEQTTDNRFFWNQSLHLHLKHYGVNCDDWLL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVYLD
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 LLGSKEGEHMLSKAFQSHLKASEHAADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LLGSKEGEHMLSKAFQSHLKASEHAADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLD
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 YGFFYFNGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKPQLVTR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 YGFFYFNGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKPQLVTR
370 380 390 400 410 420
430 440 450 460 470
pF1KA0 FQEVFRSMWSVNGDSISKIYAGTGALEGKAK---LKDGARSVTRTIQNNFFDSSKQEAID
::::::::::::::::::::::::::::::: ::::::::::::::::::::::::::
CCDS54 FQEVFRSMWSVNGDSISKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAID
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA0 VLLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKIRVCV
:::::::::::::::::::::::::: ::::::::::::::::::::::::::
CCDS54 VLLLGNTLNSDLADKARALLTTGSLR--------ASSKVLKSMCENFYKYSKPKKIRVCV
490 500 510 520 530
540 550 560 570 580 590
pF1KA0 GTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNA
540 550 560 570 580 590
600 610 620 630 640 650
pF1KA0 GNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 GNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
600 610 620 630 640 650
660 670 680 690 700 710
pF1KA0 VKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFIEIARKLSFPMGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFIEIARKLSFPMGR
660 670 680 690 700 710
720 730 740 750 760 770
pF1KA0 MLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQVFRGFLEGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQVFRGFLEGK
720 730 740 750 760 770
780 790 800 810 820 830
pF1KA0 VTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKI
780 790 800 810 820 830
840 850 860 870 880 890
pF1KA0 LYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPDGTVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 LYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPDGTVL
840 850 860 870 880 890
900 910 920 930 940 950
pF1KA0 VSIKSSLPENNFFDDALIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 VSIKSSLPENNFFDDALIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGK
900 910 920 930 940 950
960 970 980 990 1000 1010
pF1KA0 ELLNRTITIALKSPDWIKNLEEEMSLEKISIALPSSTSSTLLGEDAEVAADFDMEGDVDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ELLNRTITIALKSPDWIKNLEEEMSLEKISIALPSSTSSTLLGEDAEVAADFDMEGDVDD
960 970 980 990 1000 1010
1020 1030 1040 1050 1060 1070
pF1KA0 YSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 YSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPG
1020 1030 1040 1050 1060 1070
1080 1090 1100 1110 1120
pF1KA0 PPSAQSSPIDAQPATP----------------PPRPVAPPTRPAPPQRPPPPSGARSPAP
:::::::::::::::: ::::::::::::::::::::::
CCDS54 PPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSG------
1080 1090 1100 1110 1120
1130 1140 1150 1160 1170 1180
pF1KA0 TRKEFGAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHAR
::::::::::::::::::::::::::::::::::::::::
CCDS54 --------------------RSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHAR
1130 1140 1150 1160
1190 1200 1210 1220 1230 1240
pF1KA0 ASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQ
1170 1180 1190 1200 1210 1220
1250 1260 1270
pF1KA0 SGPQPNLETPPQPPPRSRSSHSLPSEASSQPQQEQPSG
::::::::::::::::::::::::::::::::
CCDS54 SGPQPNLETPPQPPPRSRSSHSLPSEASSQPQVKTNGISDGKRESPLKIDPFEDLSFNLL
1230 1240 1250 1260 1270 1280
CCDS54 AVSKAQLSVQTSPVPTPDPKRLIQLPSATQSNVLSSVSCMPTMPPIPARSQSQENMRSSP
1290 1300 1310 1320 1330 1340
>>CCDS5254.1 SYNJ2 gene_id:8871|Hs108|chr6 (1496 aa)
initn: 3506 init1: 1484 opt: 3811 Z-score: 1387.6 bits: 269.2 E(32554): 5.8e-71
Smith-Waterman score: 4007; 47.5% identity (74.0% similar) in 1330 aa overlap (1-1278:1-1307)
10 20 30 40 50
pF1KA0 MAFSKGFRIYHKLDPP-PFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYSKVLDA
::.:::.:. .: :...:.: ...::.::.:.::.:. :::.::: :.:. ::
CCDS52 MALSKGLRLLGRLGAEGDCSVLLEARGRDDCLLFEAGTVATLAPEEKEVIKGQYGKLTDA
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 YGLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRIDSSDEDRISEV
:: :: :::. : : : .::::::: :::.: ..:....:.:.: :. ....:.:. .
CCDS52 YGCLGELRLKSGGTSLSFLVLVTGCTSVGRIPDAEIYKITATDFYPLQEEAKEEERLIAL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 RKVLNSGNFYFAWSASGISLDLSLNAHRSMQEQTT-DNRFFWNQSLHLHLKHYGVNCDDW
.:.:.:: :::.: .: .::.. .... .... : ::::: ::. :... :.: ::
CCDS52 KKILSSGVFYFSWPNDGSRFDLTVRTQKQGDDSSEWGNSFFWNQLLHVPLRQHQVSCCDW
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA0 LLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVVY
::...:: : :::.::.::::::::.::.::::.::::..::.::::::.:::::::..:
CCDS52 LLKIICGVVTIRTVYASHKQAKACLVSRVSCERTGTRFHTRGVNDDGHVSNFVETEQMIY
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA0 LDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQII
.::.::::.::::::::::::::::::::..:. ::.::::::::::. ::. ::.:..
CCDS52 MDDGVSSFVQIRGSVPLFWEQPGLQVGSHHLRLHRGLEANAPAFDRHMVLLKEQYGQQVV
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA0 VNLLGSKEGEHMLSKAFQSHLKASEHAADIQMVNFDYHQMVKGGKAEKLHSVLKPQVQ-K
::::::. ::..:..::.. : :: ::.: :.:::.::..:::: :::...:.::.. .
CCDS52 VNLLGSRGGEEVLNRAFKKLLWASCHAGDTPMINFDFHQFAKGGKLEKLETLLRPQLKLH
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA0 FLDYGFFYFNGSEVQ-RCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKPQ
. :. : .: .:. : :.::.: ::::::::::.::.:..::.: ::..:::. ::
CCDS52 WEDFDVFT-KGENVSPRFQKGTLRMNCLDCLDRTNTVQSFIALEVLHLQLKTLGLSSKP-
370 380 390 400 410
420 430 440 450 460 470
pF1KA0 LVTRFQEVFRSMWSVNGDSISKIYAGTGALEGKAK---LKDGARSVTRTIQNNFFDSSKQ
.: :: : :..:::.:: :.::...:. ::::::: :::::::..::::.::::. ::
CCDS52 IVDRFVESFKAMWSLNGHSLSKVFTGSRALEGKAKVGKLKDGARSMSRTIQSNFFDGVKQ
420 430 440 450 460 470
480 490 500 510 520 530
pF1KA0 EAIDVLLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKSMCENFYKYSKPKKI
::: .::.:.. . ..:::. :: . .: :. ..::.: : .... :.:
CCDS52 EAIKLLLVGDVYGEEVADKGGMLLDSTALLVTP--------RILKAMTERQSEFTNFKRI
480 490 500 510 520 530
540 550 560 570 580 590
pF1KA0 RVCVGTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMV
:. .::::::::::::: .... :::::::.:.:.: . :: :.:.::::.::::::
CCDS52 RIAMGTWNVNGGKQFRSNVLRTAELTDWLLDSPQLSGATDSQDD-SSPADIFAVGFEEMV
540 550 560 570 580
600 610 620 630 640 650
pF1KA0 ELNAGNIVSASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDV
::.:::::.:::::.:.:. .:::.:::...:.::.: :::::::..:.:: :.::::::
CCDS52 ELSAGNIVNASTTNKKMWGEQLQKAISRSHRYILLTSAQLVGVCLYIFVRPYHVPFIRDV
590 600 610 620 630 640
660 670 680 690 700 710
pF1KA0 AVDTVKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFIEIARKLSF
:.::::::::: .::::::.::. ::.::.::.:::..::::::::::::. ::..:: :
CCDS52 AIDTVKTGMGGKAGNKGAVGIRFQFHSTSFCFICSHLTAGQSQVKERNEDYKEITQKLCF
650 660 670 680 690 700
720 730 740 750 760 770
pF1KA0 PMGRMLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQVFRGF
:::: .:::::::::::::::::: ::: ....:.: .:. ::: ::..:..:. :
CCDS52 PMGRNVFSHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDF
710 720 730 740 750 760
780 790 800 810 820 830
pF1KA0 LEGKVTFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQD
:: ..:.::::::. : ::::.::::::::::::: :.: :::..: .:.::.....
CCDS52 HEGAINFGPTYKYDVGSAAYDTSDKCRTPAWTDRVLWWRKKHPFDKTAGELNLLDSDLDV
770 780 790 800 810 820
840 850 860 870 880 890
pF1KA0 ESKILYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQNIYKEVIAVQGPPD
..:. .::.::.: .::::::..::::::.:...... ::.. :. ...:: . ::: :
CCDS52 DTKVRHTWSPGALQYYGRAELQASDHRPVLAIVEVEVQEVDVGARERVFQEVSSFQGPLD
830 840 850 860 870 880
900 910 920 930 940 950
pF1KA0 GTVLVSIKS-SLPENNFFDDALIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVL
.::.:...: .: :.: : . : ::.: ..:.: ..:.:. . .: ::: .. :::.::
CCDS52 ATVVVNLQSPTLEEKNEFPEDLRTELMQTLGSYGTIVLVRINQGQMLVTFADSHSALSVL
890 900 910 920 930 940
960 970 980 990 1000 1010
pF1KA0 SLNGKELLNRTITIALKSPDWIKNLEEEMSLEKISIALPSSTS-STLLGEDAEVAA-DFD
...: .. .:.. : :. ::.:.:.::. .. :.: : :. : :: :. . .. :..
CCDS52 DVDGMKVKGRAVKIRPKTKDWLKGLREEIIRKRDSMAPVSPTANSCLLEENFDFTSLDYE
950 960 970 980 990 1000
1020 1030 1040 1050 1060
pF1KA0 MEGDV--DDYSAEVEELLPQHLQPSSSSG--LGTSPSSSPRTSPCQSPTISEGPVPSLPI
:::. :: . :.:. .. : .: :. :. . . : .::....
CCDS52 SEGDILEDDEDYLVDEFNQPGVSDSELGGDDLSDVPGPTALAPPSKSPALTKKKQ-----
1010 1020 1030 1040 1050 1060
1070 1080 1090 1100 1110 1120
pF1KA0 RPSRAPSRTPGPPSAQSSPIDAQPATPPPRPVAPPTRP---APPQRPPPPSGARSPAPTR
.:. . . . . : : .. :.:: ::::::::.: .
CCDS52 HPTYKDDADLVELKRELEAVGEFRHRSPSRSLSVPNRPRPPQPPQRPPPPTGLMVK---K
1070 1080 1090 1100 1110 1120
1130 1140 1150 1160 1170
pF1KA0 KEFGAPKSPGTTRKDNI--------GRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISA
. : : :: . .: : : :.: . : . . . : .: .
CCDS52 SASDASISSGTHGQYSILQTARLLPGAPQQPPKARTGISKPYNVKQIKTTNAQEAEAAIR
1130 1140 1150 1160 1170 1180
1180 1190 1200 1210 1220
pF1KA0 PQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFP--PQSS-----LPPPA---
.::..: . :. : .. . .. ::: : :: : ::. :::
CCDS52 CLLEARGGA---SEEALSAVAPRDLEASSEPEPT-PGAAKPETPQAPPLLPRRPPPRVPA
1190 1200 1210 1220 1230
1230 1240 1250 1260
pF1KA0 ------QRLQEPLVPVAAPMPQS-----GP-QPNLETPP---QP--PPRSRSSHSLPSEA
.: .:: : :. :: . ..:.:: : :: . :..:
CCDS52 IKKPTLRRTGKPLSPEEQFEQQTVHFTIGPPETSVEAPPVVTAPRVPPVPKPRTFQPGKA
1240 1250 1260 1270 1280 1290
1270
pF1KA0 SSQPQQEQPSG
. .:....:.
CCDS52 AERPSHRKPASDEAPPGAGASVPPPLEAPPLVPKVPPRRKKSAPAAFHLQVLQSNSQLLQ
1300 1310 1320 1330 1340 1350
1279 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:33:31 2016 done: Thu Nov 3 10:33:32 2016
Total Scan time: 5.360 Total Display time: 0.360
Function used was FASTA [36.3.4 Apr, 2011]