Result of FASTA (omim) for
pF1KA0892
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0892, 613 aa
1>>>pF1KA0892 613 - 613 aa - 613 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4161+/-0.0004; mu= 18.8776+/- 0.025
mean_var=71.2907+/-14.216, 0's: 0 Z-trim(112.7): 15 B-trim: 1354 in 1/53
Lambda= 0.151900
statistics sampled from 21747 (21753) to 21747 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.611), E-opt: 0.2 (0.255), width: 16
Scan time: 9.300
The best scores are: opt bits E(85289)
NP_056144 (OMIM: 614560) MAU2 chromatid cohesion f ( 613) 4090 905.9 0
XP_005259894 (OMIM: 614560) PREDICTED: MAU2 chroma ( 612) 4073 902.1 0
XP_005259895 (OMIM: 614560) PREDICTED: MAU2 chroma ( 624) 3301 733.0 7.4e-211
XP_016882028 (OMIM: 614560) PREDICTED: MAU2 chroma ( 623) 3284 729.2 9.7e-210
XP_006722774 (OMIM: 614560) PREDICTED: MAU2 chroma ( 492) 2900 645.0 1.7e-184
XP_011526146 (OMIM: 614560) PREDICTED: MAU2 chroma ( 421) 2826 628.8 1.2e-179
>>NP_056144 (OMIM: 614560) MAU2 chromatid cohesion facto (613 aa)
initn: 4090 init1: 4090 opt: 4090 Z-score: 4841.2 bits: 905.9 E(85289): 0
Smith-Waterman score: 4090; 100.0% identity (100.0% similar) in 613 aa overlap (1-613:1-613)
10 20 30 40 50 60
pF1KA0 MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 QRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 NSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 EYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 MQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 SQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 NLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 NLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKR
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 FLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 FLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLW
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 SSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 SSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQ
550 560 570 580 590 600
610
pF1KA0 AQNGPNTSLASLL
:::::::::::::
NP_056 AQNGPNTSLASLL
610
>>XP_005259894 (OMIM: 614560) PREDICTED: MAU2 chromatid (612 aa)
initn: 2893 init1: 2893 opt: 4073 Z-score: 4821.0 bits: 902.1 E(85289): 0
Smith-Waterman score: 4073; 99.8% identity (99.8% similar) in 613 aa overlap (1-613:1-612)
10 20 30 40 50 60
pF1KA0 MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 QRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 NSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 EYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 MQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 SQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 NLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKR
::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
XP_005 NLASVYIREGNRHQE-LYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKR
430 440 450 460 470
490 500 510 520 530 540
pF1KA0 FLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLW
480 490 500 510 520 530
550 560 570 580 590 600
pF1KA0 SSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQ
540 550 560 570 580 590
610
pF1KA0 AQNGPNTSLASLL
:::::::::::::
XP_005 AQNGPNTSLASLL
600 610
>>XP_005259895 (OMIM: 614560) PREDICTED: MAU2 chromatid (624 aa)
initn: 3296 init1: 3296 opt: 3301 Z-score: 3906.6 bits: 733.0 E(85289): 7.4e-211
Smith-Waterman score: 3836; 95.4% identity (95.4% similar) in 613 aa overlap (1-613:40-624)
10 20 30
pF1KA0 MAAQAAAAAQAAAAQAAQAEAADSWYLALL
::::::::::::::::::::::::::::::
XP_005 SRGSREESPAPSRAPASASLWRRLVVVEAKMAAQAAAAAQAAAAQAAQAEAADSWYLALL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA0 GFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQLGSVLYHHTKNSEQARSHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQLGSVLYHHTKNSEQARSHLE
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA0 KAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQISQQTPYWHCRLLFQ
:: ::::::::::::::::::::::::::::::
XP_005 KA----------------------------NSVDAAKPLLRKAIQISQQTPYWHCRLLFQ
130 140 150 160
160 170 180 190 200 210
pF1KA0 LAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTL
170 180 190 200 210 220
220 230 240 250 260 270
pF1KA0 CGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDE
230 240 250 260 270 280
280 290 300 310 320 330
pF1KA0 ILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSP
290 300 310 320 330 340
340 350 360 370 380 390
pF1KA0 ILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCV
350 360 370 380 390 400
400 410 420 430 440 450
pF1KA0 SVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSF
410 420 430 440 450 460
460 470 480 490 500 510
pF1KA0 PVSSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVSSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFY
470 480 490 500 510 520
520 530 540 550 560 570
pF1KA0 VLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQ
530 540 550 560 570 580
580 590 600 610
pF1KA0 QLLQDHIEACSLPEHNLITWTDGPPPVQFQAQNGPNTSLASLL
:::::::::::::::::::::::::::::::::::::::::::
XP_005 QLLQDHIEACSLPEHNLITWTDGPPPVQFQAQNGPNTSLASLL
590 600 610 620
>>XP_016882028 (OMIM: 614560) PREDICTED: MAU2 chromatid (623 aa)
initn: 2099 init1: 2099 opt: 3284 Z-score: 3886.5 bits: 729.2 E(85289): 9.7e-210
Smith-Waterman score: 3819; 95.3% identity (95.3% similar) in 613 aa overlap (1-613:40-623)
10 20 30
pF1KA0 MAAQAAAAAQAAAAQAAQAEAADSWYLALL
::::::::::::::::::::::::::::::
XP_016 SRGSREESPAPSRAPASASLWRRLVVVEAKMAAQAAAAAQAAAAQAAQAEAADSWYLALL
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA0 GFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQLGSVLYHHTKNSEQARSHLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFAEHFRTSSPPKIRLCVHCLQAVFPFKPPQRIEARTHLQLGSVLYHHTKNSEQARSHLE
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA0 KAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQISQQTPYWHCRLLFQ
:: ::::::::::::::::::::::::::::::
XP_016 KA----------------------------NSVDAAKPLLRKAIQISQQTPYWHCRLLFQ
130 140 150 160
160 170 180 190 200 210
pF1KA0 LAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTL
170 180 190 200 210 220
220 230 240 250 260 270
pF1KA0 CGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDE
230 240 250 260 270 280
280 290 300 310 320 330
pF1KA0 ILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSP
290 300 310 320 330 340
340 350 360 370 380 390
pF1KA0 ILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCV
350 360 370 380 390 400
400 410 420 430 440 450
pF1KA0 SVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSF
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
XP_016 SVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQE-LYSLLERINPDHSF
410 420 430 440 450 460
460 470 480 490 500 510
pF1KA0 PVSSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVSSHCLRAAAFYVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFY
470 480 490 500 510 520
520 530 540 550 560 570
pF1KA0 VLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQ
530 540 550 560 570 580
580 590 600 610
pF1KA0 QLLQDHIEACSLPEHNLITWTDGPPPVQFQAQNGPNTSLASLL
:::::::::::::::::::::::::::::::::::::::::::
XP_016 QLLQDHIEACSLPEHNLITWTDGPPPVQFQAQNGPNTSLASLL
590 600 610 620
>>XP_006722774 (OMIM: 614560) PREDICTED: MAU2 chromatid (492 aa)
initn: 3107 init1: 2898 opt: 2900 Z-score: 3433.2 bits: 645.0 E(85289): 1.7e-184
Smith-Waterman score: 2900; 97.3% identity (98.2% similar) in 451 aa overlap (1-451:1-449)
10 20 30 40 50 60
pF1KA0 MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 QRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 NSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 EYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHY
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 LDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 MQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 SQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 NLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKR
::::::::::::::::. :. . :. :
XP_006 NLASVYIREGNRHQEVV--ALQSAGEDQPGPQLPCQLALPPSSRLLCAWALLLLPGTLQR
430 440 450 460 470
490 500 510 520 530 540
pF1KA0 FLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLW
XP_006 GQAISAGNSEDVQC
480 490
>>XP_011526146 (OMIM: 614560) PREDICTED: MAU2 chromatid (421 aa)
initn: 2826 init1: 2826 opt: 2826 Z-score: 3346.5 bits: 628.8 E(85289): 1.2e-179
Smith-Waterman score: 2826; 100.0% identity (100.0% similar) in 421 aa overlap (193-613:1-421)
170 180 190 200 210 220
pF1KA0 SACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNP
::::::::::::::::::::::::::::::
XP_011 MLLLMERKLQEVHPLLTLCGQIVENWQGNP
10 20 30
230 240 250 260 270 280
pF1KA0 IQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHW
40 50 60 70 80 90
290 300 310 320 330 340
pF1KA0 LPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEH
100 110 120 130 140 150
350 360 370 380 390 400
pF1KA0 IIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQF
160 170 180 190 200 210
410 420 430 440 450 460
pF1KA0 TTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAF
220 230 240 250 260 270
470 480 490 500 510 520
pF1KA0 YVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YVRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMV
280 290 300 310 320 330
530 540 550 560 570 580
pF1KA0 VPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSL
340 350 360 370 380 390
590 600 610
pF1KA0 PEHNLITWTDGPPPVQFQAQNGPNTSLASLL
:::::::::::::::::::::::::::::::
XP_011 PEHNLITWTDGPPPVQFQAQNGPNTSLASLL
400 410 420
613 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 10:30:09 2016 done: Thu Nov 3 10:30:10 2016
Total Scan time: 9.300 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]