Result of FASTA (omim) for
pF1KA0872
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0872, 547 aa
1>>>pF1KA0872 547 - 547 aa - 547 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.0679+/-0.000319; mu= 1.9826+/- 0.020
mean_var=178.3162+/-35.718, 0's: 0 Z-trim(121.9): 9 B-trim: 50 in 1/58
Lambda= 0.096046
statistics sampled from 39284 (39293) to 39284 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.461), width: 16
Scan time: 12.770
The best scores are: opt bits E(85289)
NP_055755 (OMIM: 608954) vacuolar fusion protein M ( 547) 3632 515.2 2.1e-145
NP_001273569 (OMIM: 608954) vacuolar fusion protei ( 401) 2564 367.2 5.5e-101
NP_001273568 (OMIM: 608954) vacuolar fusion protei ( 438) 2562 366.9 7.2e-101
XP_011532462 (OMIM: 611464) PREDICTED: vacuolar fu ( 555) 946 143.0 2.3e-33
XP_006713408 (OMIM: 611464) PREDICTED: vacuolar fu ( 555) 946 143.0 2.3e-33
NP_115731 (OMIM: 611464) vacuolar fusion protein M ( 652) 946 143.1 2.6e-33
NP_001135973 (OMIM: 611464) vacuolar fusion protei ( 490) 473 77.5 1.1e-13
>>NP_055755 (OMIM: 608954) vacuolar fusion protein MON1 (547 aa)
initn: 3632 init1: 3632 opt: 3632 Z-score: 2731.6 bits: 515.2 E(85289): 2.1e-145
Smith-Waterman score: 3632; 100.0% identity (100.0% similar) in 547 aa overlap (1-547:1-547)
10 20 30 40 50 60
pF1KA0 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
490 500 510 520 530 540
pF1KA0 NGLFTGL
:::::::
NP_055 NGLFTGL
>>NP_001273569 (OMIM: 608954) vacuolar fusion protein MO (401 aa)
initn: 2564 init1: 2564 opt: 2564 Z-score: 1933.9 bits: 367.2 E(85289): 5.5e-101
Smith-Waterman score: 2564; 99.2% identity (99.7% similar) in 392 aa overlap (156-547:10-401)
130 140 150 160 170 180
pF1KA0 YGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQ
. .:::::::::::::::::::::::::::
NP_001 MVSGQLRFGVKTEDHKLVFLQQGPLLLVAMSRTSQSAAQ
10 20 30
190 200 210 220 230 240
pF1KA0 LRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLL
40 50 60 70 80 90
250 260 270 280 290 300
pF1KA0 GAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQ
100 110 120 130 140 150
310 320 330 340 350 360
pF1KA0 LLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAFHAMAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAFHAMAA
160 170 180 190 200 210
370 380 390 400 410 420
pF1KA0 CRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHR
220 230 240 250 260 270
430 440 450 460 470 480
pF1KA0 QLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTSK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTSK
280 290 300 310 320 330
490 500 510 520 530 540
pF1KA0 FELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAHNGLFT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAHNGLFT
340 350 360 370 380 390
pF1KA0 GL
::
NP_001 GL
400
>>NP_001273568 (OMIM: 608954) vacuolar fusion protein MO (438 aa)
initn: 2886 init1: 2562 opt: 2562 Z-score: 1931.9 bits: 366.9 E(85289): 7.2e-101
Smith-Waterman score: 2672; 80.1% identity (80.1% similar) in 547 aa overlap (1-547:1-438)
10 20 30 40 50 60
pF1KA0 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEETGSKDKDQPPSP
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MEVGGDTAAPAPGGAEDLEDTQFPSEEAREGGGVHAVPPDPEDEGLEET-----------
10 20 30 40
70 80 90 100 110 120
pF1KA0 SPPPQSEALSSTSRLWSPAAPENSPTCSPESSSGGQGGDPSDEEWRSQRKHVFVLSEAGK
NP_001 ------------------------------------------------------------
130 140 150 160 170 180
pF1KA0 PIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTS
::::::::::::::::::::::
NP_001 --------------------------------------EDHKLVFLQQGPLLLVAMSRTS
50 60 70
190 200 210 220 230 240
pF1KA0 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDP
80 90 100 110 120 130
250 260 270 280 290 300
pF1KA0 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLD
140 150 160 170 180 190
310 320 330 340 350 360
pF1KA0 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PADLQLLLDWVGAPAFAAGEAWAPVCLPRFNPDGFFYAYVARLDAMPVCLLLLGTQREAF
200 210 220 230 240 250
370 380 390 400 410 420
pF1KA0 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HAMAACRRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDI
260 270 280 290 300 310
430 440 450 460 470 480
pF1KA0 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLA
320 330 340 350 360 370
490 500 510 520 530 540
pF1KA0 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAH
380 390 400 410 420 430
pF1KA0 NGLFTGL
:::::::
NP_001 NGLFTGL
>>XP_011532462 (OMIM: 611464) PREDICTED: vacuolar fusion (555 aa)
initn: 1262 init1: 548 opt: 946 Z-score: 720.1 bits: 143.0 E(85289): 2.3e-33
Smith-Waterman score: 1390; 46.3% identity (70.6% similar) in 521 aa overlap (16-527:58-555)
10 20 30 40
pF1KA0 MEVGGDTAAPAPGGAEDL---EDTQFPSEEAREGGGVHAVPPDPE
::: :: .. .:: ... :: :
XP_011 RAESPTPGMAQGMEPGAGQEGAMFVHARSYEDLTESEDGAASGDSHKEG--TRGPPPLPT
30 40 50 60 70 80
50 60 70 80 90 100
pF1KA0 D-EGLEETGSKDKDQPPSPSPPPQSEALSSTSRLW-SPAAPENSPTCSPESSSGGQGGDP
: . . . :. . : . . : : : ..:. : : . . :. : : ::
XP_011 DMRQISQDFSELSTQLTGVARDLQEEMLPGSSEDWLEPPGAVGRPATEPPRE-GTTEGDE
90 100 110 120 130 140
110 120 130 140 150
pF1KA0 SD--EEWRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYA
: : :: ..::::::::::::.:::::: ::::.:::::.:::::... .:::.:.:
XP_011 EDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHA
150 160 170 180 190 200
160 170 180 190 200 210
pF1KA0 EDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDL
. .:.::....::.:::..:: ::: .: ::: .. ::.: :: :....:: .::::::
XP_011 DGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDL
210 220 230 240 250 260
220 230 240 250 260 270
pF1KA0 RRLLAGSERTLDRLLDSMEQDPGALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVL
::::.:::: : ::. : .:: ..:.::.::.::: .::...: :.. : .:..:.:
XP_011 RRLLSGSERITDNLLQLMARDP-SFLMGAARCLPLAAAVRDTVSASLQQARARSLVFSIL
270 280 290 300 310 320
280 290 300 310 320 330
pF1KA0 AVGGRLITAAQERNVLAECRLDPADLQLLLDWVGAPA-FAAGEAWAPVCLPRFNPDGFFY
. ..:.. ..... . : : ::.::.. ... . : ::::.:::::.:: :::.
XP_011 LARNQLVALVRRKDQF----LHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH
330 340 350 360 370
340 350 360 370 380 390
pF1KA0 AYVARLDA-MPVCLLLLGTQREAFHAMAACRRLVEDGMHALGAMRALGEAASFSNASSAS
:... :. .::::..:.:: : :.. ::: .. .. :: :: ::
XP_011 AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALR--------
380 390 400 410 420 430
400 410 420 430 440 450
pF1KA0 APAYSVQAVGAPGLRHFLYKPLDIPDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLH
.: ::: :: : ::::::: .. :::::.::::. :::..:: ::. ::
XP_011 TPYYSVAQVGIPDLRHFLYK-------SKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLH
440 450 460 470 480
460 470 480 490 500 510
pF1KA0 ARLHSTSRPLRLIYHVAEKETLLAWVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEE
.: :..::::. ::... .:.::::::. :::: : ::: :::.:. .. ::.::..:::
XP_011 SRAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEE
490 500 510 520 530 540
520 530 540
pF1KA0 DRLFIRYPPKYSTPPATSTDQAAHNGLFTGL
::::: : :
XP_011 DRLFILTPLTY
550
>>XP_006713408 (OMIM: 611464) PREDICTED: vacuolar fusion (555 aa)
initn: 1262 init1: 548 opt: 946 Z-score: 720.1 bits: 143.0 E(85289): 2.3e-33
Smith-Waterman score: 1390; 46.3% identity (70.6% similar) in 521 aa overlap (16-527:58-555)
10 20 30 40
pF1KA0 MEVGGDTAAPAPGGAEDL---EDTQFPSEEAREGGGVHAVPPDPE
::: :: .. .:: ... :: :
XP_006 RAESPTPGMAQGMEPGAGQEGAMFVHARSYEDLTESEDGAASGDSHKEG--TRGPPPLPT
30 40 50 60 70 80
50 60 70 80 90 100
pF1KA0 D-EGLEETGSKDKDQPPSPSPPPQSEALSSTSRLW-SPAAPENSPTCSPESSSGGQGGDP
: . . . :. . : . . : : : ..:. : : . . :. : : ::
XP_006 DMRQISQDFSELSTQLTGVARDLQEEMLPGSSEDWLEPPGAVGRPATEPPRE-GTTEGDE
90 100 110 120 130 140
110 120 130 140 150
pF1KA0 SD--EEWRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYA
: : :: ..::::::::::::.:::::: ::::.:::::.:::::... .:::.:.:
XP_006 EDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHA
150 160 170 180 190 200
160 170 180 190 200 210
pF1KA0 EDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDL
. .:.::....::.:::..:: ::: .: ::: .. ::.: :: :....:: .::::::
XP_006 DGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDL
210 220 230 240 250 260
220 230 240 250 260 270
pF1KA0 RRLLAGSERTLDRLLDSMEQDPGALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVL
::::.:::: : ::. : .:: ..:.::.::.::: .::...: :.. : .:..:.:
XP_006 RRLLSGSERITDNLLQLMARDP-SFLMGAARCLPLAAAVRDTVSASLQQARARSLVFSIL
270 280 290 300 310 320
280 290 300 310 320 330
pF1KA0 AVGGRLITAAQERNVLAECRLDPADLQLLLDWVGAPA-FAAGEAWAPVCLPRFNPDGFFY
. ..:.. ..... . : : ::.::.. ... . : ::::.:::::.:: :::.
XP_006 LARNQLVALVRRKDQF----LHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH
330 340 350 360 370
340 350 360 370 380 390
pF1KA0 AYVARLDA-MPVCLLLLGTQREAFHAMAACRRLVEDGMHALGAMRALGEAASFSNASSAS
:... :. .::::..:.:: : :.. ::: .. .. :: :: ::
XP_006 AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALR--------
380 390 400 410 420 430
400 410 420 430 440 450
pF1KA0 APAYSVQAVGAPGLRHFLYKPLDIPDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLH
.: ::: :: : ::::::: .. :::::.::::. :::..:: ::. ::
XP_006 TPYYSVAQVGIPDLRHFLYK-------SKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLH
440 450 460 470 480
460 470 480 490 500 510
pF1KA0 ARLHSTSRPLRLIYHVAEKETLLAWVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEE
.: :..::::. ::... .:.::::::. :::: : ::: :::.:. .. ::.::..:::
XP_006 SRAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEE
490 500 510 520 530 540
520 530 540
pF1KA0 DRLFIRYPPKYSTPPATSTDQAAHNGLFTGL
::::: : :
XP_006 DRLFILTPLTY
550
>>NP_115731 (OMIM: 611464) vacuolar fusion protein MON1 (652 aa)
initn: 1262 init1: 548 opt: 946 Z-score: 719.0 bits: 143.1 E(85289): 2.6e-33
Smith-Waterman score: 1390; 46.3% identity (70.6% similar) in 521 aa overlap (16-527:155-652)
10 20 30 40
pF1KA0 MEVGGDTAAPAPGGAEDL---EDTQFPSEEAREGGGVHAVPPDPE
::: :: .. .:: ... :: :
NP_115 RAESPTPGMAQGMEPGAGQEGAMFVHARSYEDLTESEDGAASGDSHKEG--TRGPPPLPT
130 140 150 160 170 180
50 60 70 80 90 100
pF1KA0 D-EGLEETGSKDKDQPPSPSPPPQSEALSSTSRLW-SPAAPENSPTCSPESSSGGQGGDP
: . . . :. . : . . : : : ..:. : : . . :. : : ::
NP_115 DMRQISQDFSELSTQLTGVARDLQEEMLPGSSEDWLEPPGAVGRPATEPPRE-GTTEGDE
190 200 210 220 230 240
110 120 130 140 150
pF1KA0 SD--EEWRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYA
: : :: ..::::::::::::.:::::: ::::.:::::.:::::... .:::.:.:
NP_115 EDATEAWRLHQKHVFVLSEAGKPVYSRYGSEEALSSTMGVMVALVSFLEADKNAIRSIHA
250 260 270 280 290 300
160 170 180 190 200 210
pF1KA0 EDHKLVFLQQGPLLLVAMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDL
. .:.::....::.:::..:: ::: .: ::: .. ::.: :: :....:: .::::::
NP_115 DGYKVVFVRRSPLVLVAVARTRQSAQELAQELLYIYYQILSLLTGAQLSHIFQQKQNYDL
310 320 330 340 350 360
220 230 240 250 260 270
pF1KA0 RRLLAGSERTLDRLLDSMEQDPGALLLGAVRCVPLARPLRDALGALLRRCTAPGLALSVL
::::.:::: : ::. : .:: ..:.::.::.::: .::...: :.. : .:..:.:
NP_115 RRLLSGSERITDNLLQLMARDP-SFLMGAARCLPLAAAVRDTVSASLQQARARSLVFSIL
370 380 390 400 410 420
280 290 300 310 320 330
pF1KA0 AVGGRLITAAQERNVLAECRLDPADLQLLLDWVGAPA-FAAGEAWAPVCLPRFNPDGFFY
. ..:.. ..... . : : ::.::.. ... . : ::::.:::::.:: :::.
NP_115 LARNQLVALVRRKDQF----LHPIDLHLLFNLISSSSSFREGEAWTPVCLPKFNAAGFFH
430 440 450 460 470
340 350 360 370 380 390
pF1KA0 AYVARLDA-MPVCLLLLGTQREAFHAMAACRRLVEDGMHALGAMRALGEAASFSNASSAS
:... :. .::::..:.:: : :.. ::: .. .. :: :: ::
NP_115 AHISYLEPDTDLCLLLVSTDREDFFAVSDCRRRFQERLRKRGAHLALREALR--------
480 490 500 510 520
400 410 420 430 440 450
pF1KA0 APAYSVQAVGAPGLRHFLYKPLDIPDHHRQLPQFTSPELEAPYSREEERQRLSDLYHRLH
.: ::: :: : ::::::: .. :::::.::::. :::..:: ::. ::
NP_115 TPYYSVAQVGIPDLRHFLYK-------SKSSGLFTSPEIEAPYTSEEEQERLLGLYQYLH
530 540 550 560 570 580
460 470 480 490 500 510
pF1KA0 ARLHSTSRPLRLIYHVAEKETLLAWVTSKFELYTCLSPLVTKAGAILVVTKLLRWVKKEE
.: :..::::. ::... .:.::::::. :::: : ::: :::.:. .. ::.::..:::
NP_115 SRAHNASRPLKTIYYTGPNENLLAWVTGAFELYMCYSPLGTKASAVSAIHKLMRWIRKEE
590 600 610 620 630 640
520 530 540
pF1KA0 DRLFIRYPPKYSTPPATSTDQAAHNGLFTGL
::::: : :
NP_115 DRLFILTPLTY
650
>>NP_001135973 (OMIM: 611464) vacuolar fusion protein MO (490 aa)
initn: 964 init1: 400 opt: 473 Z-score: 366.7 bits: 77.5 E(85289): 1.1e-13
Smith-Waterman score: 1073; 47.4% identity (73.6% similar) in 371 aa overlap (159-527:140-490)
130 140 150 160 170 180
pF1KA0 VEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAAQLRG
. .:.::....::.:::..:: ::: .:
NP_001 CLDGTLTPSDGQSMERAESPTPGMAQGMEPDGYKVVFVRRSPLVLVAVARTRQSAQELAQ
110 120 130 140 150 160
190 200 210 220 230 240
pF1KA0 ELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERTLDRLLDSMEQDPGALLLGAV
::: .. ::.: :: :....:: .::::::::::.:::: : ::. : .:: ..:.::.
NP_001 ELLYIYYQILSLLTGAQLSHIFQQKQNYDLRRLLSGSERITDNLLQLMARDP-SFLMGAA
170 180 190 200 210 220
250 260 270 280 290 300
pF1KA0 RCVPLARPLRDALGALLRRCTAPGLALSVLAVGGRLITAAQERNVLAECRLDPADLQLLL
::.::: .::...: :.. : .:..:.: . ..:.. ..... . : : ::.::.
NP_001 RCLPLAAAVRDTVSASLQQARARSLVFSILLARNQLVALVRRKDQF----LHPIDLHLLF
230 240 250 260 270 280
310 320 330 340 350 360
pF1KA0 DWVGAPA-FAAGEAWAPVCLPRFNPDGFFYAYVARLDA-MPVCLLLLGTQREAFHAMAAC
. ... . : ::::.:::::.:: :::.:... :. .::::..:.:: : :.. :
NP_001 NLISSSSSFREGEAWTPVCLPKFNAAGFFHAHISYLEPDTDLCLLLVSTDREDFFAVSDC
290 300 310 320 330 340
370 380 390 400 410 420
pF1KA0 RRLVEDGMHALGAMRALGEAASFSNASSASAPAYSVQAVGAPGLRHFLYKPLDIPDHHRQ
:: .. .. :: :: :: .: ::: :: : ::::::: ..
NP_001 RRRFQERLRKRGAHLALREALR--------TPYYSVAQVGIPDLRHFLYKS-------KS
350 360 370 380
430 440 450 460 470 480
pF1KA0 LPQFTSPELEAPYSREEERQRLSDLYHRLHARLHSTSRPLRLIYHVAEKETLLAWVTSKF
:::::.::::. :::..:: ::. ::.: :..::::. ::... .:.::::::. :
NP_001 SGLFTSPEIEAPYTSEEEQERLLGLYQYLHSRAHNASRPLKTIYYTGPNENLLAWVTGAF
390 400 410 420 430 440
490 500 510 520 530 540
pF1KA0 ELYTCLSPLVTKAGAILVVTKLLRWVKKEEDRLFIRYPPKYSTPPATSTDQAAHNGLFTG
::: : ::: :::.:. .. ::.::..:::::::: : :
NP_001 ELYMCYSPLGTKASAVSAIHKLMRWIRKEEDRLFILTPLTY
450 460 470 480 490
pF1KA0 L
547 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:05:42 2016 done: Fri Nov 4 01:05:44 2016
Total Scan time: 12.770 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]