Result of FASTA (ccds) for
pF1KA0810
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0810, 812 aa
1>>>pF1KA0810 812 - 812 aa - 812 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.6005+/-0.00105; mu= 8.9454+/- 0.062
mean_var=116.5921+/-23.973, 0's: 0 Z-trim(107.1): 27 B-trim: 0 in 0/51
Lambda= 0.118779
statistics sampled from 9368 (9384) to 9368 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.656), E-opt: 0.2 (0.288), width: 16
Scan time: 4.340
The best scores are: opt bits E(32554)
CCDS47525.1 SUN1 gene_id:23353|Hs108|chr7 ( 785) 3785 660.3 3.5e-189
CCDS43533.1 SUN1 gene_id:23353|Hs108|chr7 ( 702) 3548 619.7 5.4e-177
CCDS55080.1 SUN1 gene_id:23353|Hs108|chr7 ( 682) 3539 618.1 1.5e-176
CCDS55079.1 SUN1 gene_id:23353|Hs108|chr7 ( 257) 1456 261.0 1.8e-69
CCDS55078.1 SUN1 gene_id:23353|Hs108|chr7 ( 278) 1456 261.1 1.9e-69
CCDS13978.1 SUN2 gene_id:25777|Hs108|chr22 ( 717) 1036 189.2 2.1e-47
CCDS56231.1 SUN2 gene_id:25777|Hs108|chr22 ( 738) 1036 189.2 2.1e-47
CCDS64647.1 SUN3 gene_id:256979|Hs108|chr7 ( 345) 621 118.0 2.8e-26
CCDS34636.1 SUN3 gene_id:256979|Hs108|chr7 ( 357) 621 118.0 2.8e-26
CCDS13209.1 SUN5 gene_id:140732|Hs108|chr20 ( 379) 516 100.0 7.8e-21
CCDS13259.1 SPAG4 gene_id:6676|Hs108|chr20 ( 437) 490 95.6 2e-19
>>CCDS47525.1 SUN1 gene_id:23353|Hs108|chr7 (785 aa)
initn: 5205 init1: 3763 opt: 3785 Z-score: 3509.8 bits: 660.3 E(32554): 3.5e-189
Smith-Waterman score: 5155; 96.4% identity (96.7% similar) in 812 aa overlap (1-812:1-785)
10 20 30 40 50 60
pF1KA0 MDFSRLHMYSPPQCVPENTGYTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MDFSRLHMYSPPQCVPENTGYTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLAT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 TACTLGDGEAVGADSGTSSAVSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSYGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
CCDS47 TACTLGDGEAVGADSGTSSAVSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSHGG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 TVSLQDAVTRRPPVLDESWIREQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGVAAATAH
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
CCDS47 TVSLQDAVTRRPPVLDESWIREQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGAAAATAH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 NGFSCSNCSMLSERKDVLTAHPAAPGPVSRVYSRDRNQKCDDCKGKRHLDAHPGRAGTLW
::::::::::::::::::::::::::::::::::::::::
CCDS47 NGFSCSNCSMLSERKDVLTAHPAAPGPVSRVYSRDRNQKC--------------------
190 200 210 220
250 260 270 280 290 300
pF1KA0 HIWACAGYFLLQILRRIGAVGQAVSRTAWSALWLAVVAPGKAASGVFWWLGIGWYQFVTL
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 -------YFLLQILRRIGAVGQAVSRTAWSALWLAVVAPGKAASGVFWWLGIGWYQFVTL
230 240 250 260 270
310 320 330 340 350 360
pF1KA0 ISWLNVFLLTRCLRNICKFLVLLIPLFLLLAGLSLRGQGNFFSFLPVLNWASMHRTQRVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ISWLNVFLLTRCLRNICKFLVLLIPLFLLLAGLSLRGQGNFFSFLPVLNWASMHRTQRVD
280 290 300 310 320 330
370 380 390 400 410 420
pF1KA0 DPQDVFKPTTSRLKQPLQGDSEAFPWHWMSGVEQQVASLSGQCHHHGENLRELTTLLQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DPQDVFKPTTSRLKQPLQGDSEAFPWHWMSGVEQQVASLSGQCHHHGENLRELTTLLQKL
340 350 360 370 380 390
430 440 450 460 470 480
pF1KA0 QARVDQMEGGAAGPSASVRDAVGQPPRETDFMAFHQEHEVRMSHLEDILGKLREKSEAIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QARVDQMEGGAAGPSASVRDAVGQPPRETDFMAFHQEHEVRMSHLEDILGKLREKSEAIQ
400 410 420 430 440 450
490 500 510 520 530 540
pF1KA0 KELEQTKQKTISAVGEQLLPTVEHLQLELDQLKSELSSWRHVKTGCETVDAVQERVDVQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 KELEQTKQKTISAVGEQLLPTVEHLQLELDQLKSELSSWRHVKTGCETVDAVQERVDVQV
460 470 480 490 500 510
550 560 570 580 590 600
pF1KA0 REMVKLLFSEDQQGGSLEQLLQRFSSQFVSKGDLQTMLRDLQLQILRNVTHHVSVTKQLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 REMVKLLFSEDQQGGSLEQLLQRFSSQFVSKGDLQTMLRDLQLQILRNVTHHVSVTKQLP
520 530 540 550 560 570
610 620 630 640 650 660
pF1KA0 TSEAVVSAVSEAGASGITEAQARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TSEAVVSAVSEAGASGITEAQARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSET
580 590 600 610 620 630
670 680 690 700 710 720
pF1KA0 YETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTL
640 650 660 670 680 690
730 740 750 760 770 780
pF1KA0 EHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDT
700 710 720 730 740 750
790 800 810
pF1KA0 AFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK
::::::::::::::::::::::::::::::::
CCDS47 AFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK
760 770 780
>>CCDS43533.1 SUN1 gene_id:23353|Hs108|chr7 (702 aa)
initn: 4629 init1: 3548 opt: 3548 Z-score: 3291.1 bits: 619.7 E(32554): 5.4e-177
Smith-Waterman score: 4518; 91.9% identity (92.1% similar) in 762 aa overlap (51-812:1-702)
30 40 50 60 70 80
pF1KA0 YTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLATTACTLGDGEAVGADSGTSSA
::::::::::::::::::::::::::::::
CCDS43 MSRRSLRLATTACTLGDGEAVGADSGTSSA
10 20 30
90 100 110 120 130 140
pF1KA0 VSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSYGGTVSLQDAVTRRPPVLDESWI
:::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::
CCDS43 VSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSHGGTVSLQDAVTRRPPVLDESWI
40 50 60 70 80 90
150 160 170 180 190 200
pF1KA0 REQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGVAAATAHNGFSCSNCSMLSERKDVLTA
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
CCDS43 REQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGAAAATAHNGFSCSNCSMLSERKDVLTA
100 110 120 130 140 150
210 220 230 240 250 260
pF1KA0 HPAAPGPVSRVYSRDRNQKCDDCKGKRHLDAHPGRAGTLWHIWACAGYFLLQILRRIGAV
::::::::::::::::::: :
CCDS43 HPAAPGPVSRVYSRDRNQK--------------------W--------------------
160 170
270 280 290 300 310 320
pF1KA0 GQAVSRTAWSALWLAVVAPGKAASGVFWWLGIGWYQFVTLISWLNVFLLTRCLRNICKFL
::::::::::::::::::::::::::::::::::::::::
CCDS43 --------------------KAASGVFWWLGIGWYQFVTLISWLNVFLLTRCLRNICKFL
180 190 200 210
330 340 350 360 370 380
pF1KA0 VLLIPLFLLLAGLSLRGQGNFFSFLPVLNWASMHRTQRVDDPQDVFKPTTSRLKQPLQGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VLLIPLFLLLAGLSLRGQGNFFSFLPVLNWASMHRTQRVDDPQDVFKPTTSRLKQPLQGD
220 230 240 250 260 270
390 400 410 420 430 440
pF1KA0 SEAFPWHWMSGVEQQVASLSGQCHHHGENLRELTTLLQKLQARVDQMEGGAAGPSASVRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SEAFPWHWMSGVEQQVASLSGQCHHHGENLRELTTLLQKLQARVDQMEGGAAGPSASVRD
280 290 300 310 320 330
450 460 470 480 490 500
pF1KA0 AVGQPPRETDFMAFHQEHEVRMSHLEDILGKLREKSEAIQKELEQTKQKTISAVGEQLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AVGQPPRETDFMAFHQEHEVRMSHLEDILGKLREKSEAIQKELEQTKQKTISAVGEQLLP
340 350 360 370 380 390
510 520 530 540 550 560
pF1KA0 TVEHLQLELDQLKSELSSWRHVKTGCETVDAVQERVDVQVREMVKLLFSEDQQGGSLEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 TVEHLQLELDQLKSELSSWRHVKTGCETVDAVQERVDVQVREMVKLLFSEDQQGGSLEQL
400 410 420 430 440 450
570 580 590 600 610 620
pF1KA0 LQRFSSQFVSKGDLQTMLRDLQLQILRNVTHHVSVTKQLPTSEAVVSAVSEAGASGITEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LQRFSSQFVSKGDLQTMLRDLQLQILRNVTHHVSVTKQLPTSEAVVSAVSEAGASGITEA
460 470 480 490 500 510
630 640 650 660 670 680
pF1KA0 QARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 QARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQ
520 530 540 550 560 570
690 700 710 720 730 740
pF1KA0 SPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDF
580 590 600 610 620 630
750 760 770 780 790 800
pF1KA0 AVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 AVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTC
640 650 660 670 680 690
810
pF1KA0 LYRFRVHGEPVK
::::::::::::
CCDS43 LYRFRVHGEPVK
700
>>CCDS55080.1 SUN1 gene_id:23353|Hs108|chr7 (682 aa)
initn: 4177 init1: 3203 opt: 3539 Z-score: 3283.0 bits: 618.1 E(32554): 1.5e-176
Smith-Waterman score: 4250; 83.9% identity (84.0% similar) in 812 aa overlap (1-812:1-682)
10 20 30 40 50 60
pF1KA0 MDFSRLHMYSPPQCVPENTGYTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MDFSRLHMYSPPQCVPENTGYTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLAT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 TACTLGDGEAVGADSGTSSAVSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSYGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
CCDS55 TACTLGDGEAVGADSGTSSAVSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSHGG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 TVSLQDAVTRRPPVLDESWIREQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGVAAATAH
:::::::::::::::::::::::::::::::
CCDS55 TVSLQDAVTRRPPVLDESWIREQTTVDHFWG-----------------------------
130 140 150
190 200 210 220 230 240
pF1KA0 NGFSCSNCSMLSERKDVLTAHPAAPGPVSRVYSRDRNQKCDDCKGKRHLDAHPGRAGTLW
CCDS55 ------------------------------------------------------------
250 260 270 280 290 300
pF1KA0 HIWACAGYFLLQILRRIGAVGQAVSRTAWSALWLAVVAPGKAASGVFWWLGIGWYQFVTL
::::::::::::::::::::
CCDS55 ----------------------------------------KAASGVFWWLGIGWYQFVTL
160 170
310 320 330 340 350 360
pF1KA0 ISWLNVFLLTRCLRNICKFLVLLIPLFLLLAGLSLRGQGNFFSFLPVLNWASMHRTQRVD
:::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
CCDS55 ISWLNVFLLTRCLRNICKFLVLLIPLFLLL-GLSLRGQGNFFSFLPVLNWASMHRTQRVD
180 190 200 210 220 230
370 380 390 400 410 420
pF1KA0 DPQDVFKPTTSRLKQPLQGDSEAFPWHWMSGVEQQVASLSGQCHHHGENLRELTTLLQKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DPQDVFKPTTSRLKQPLQGDSEAFPWHWMSGVEQQVASLSGQCHHHGENLRELTTLLQKL
240 250 260 270 280 290
430 440 450 460 470 480
pF1KA0 QARVDQMEGGAAGPSASVRDAVGQPPRETDFMAFHQEHEVRMSHLEDILGKLREKSEAIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 QARVDQMEGGAAGPSASVRDAVGQPPRETDFMAFHQEHEVRMSHLEDILGKLREKSEAIQ
300 310 320 330 340 350
490 500 510 520 530 540
pF1KA0 KELEQTKQKTISAVGEQLLPTVEHLQLELDQLKSELSSWRHVKTGCETVDAVQERVDVQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 KELEQTKQKTISAVGEQLLPTVEHLQLELDQLKSELSSWRHVKTGCETVDAVQERVDVQV
360 370 380 390 400 410
550 560 570 580 590 600
pF1KA0 REMVKLLFSEDQQGGSLEQLLQRFSSQFVSKGDLQTMLRDLQLQILRNVTHHVSVTKQLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REMVKLLFSEDQQGGSLEQLLQRFSSQFVSKGDLQTMLRDLQLQILRNVTHHVSVTKQLP
420 430 440 450 460 470
610 620 630 640 650 660
pF1KA0 TSEAVVSAVSEAGASGITEAQARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 TSEAVVSAVSEAGASGITEAQARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSET
480 490 500 510 520 530
670 680 690 700 710 720
pF1KA0 YETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 YETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTL
540 550 560 570 580 590
730 740 750 760 770 780
pF1KA0 EHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDT
600 610 620 630 640 650
790 800 810
pF1KA0 AFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK
::::::::::::::::::::::::::::::::
CCDS55 AFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK
660 670 680
>>CCDS55079.1 SUN1 gene_id:23353|Hs108|chr7 (257 aa)
initn: 1456 init1: 1456 opt: 1456 Z-score: 1360.8 bits: 261.0 E(32554): 1.8e-69
Smith-Waterman score: 1456; 99.1% identity (100.0% similar) in 220 aa overlap (1-220:1-220)
10 20 30 40 50 60
pF1KA0 MDFSRLHMYSPPQCVPENTGYTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MDFSRLHMYSPPQCVPENTGYTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLAT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 TACTLGDGEAVGADSGTSSAVSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSYGG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::
CCDS55 TACTLGDGEAVGADSGTSSAVSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSHGG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 TVSLQDAVTRRPPVLDESWIREQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGVAAATAH
:::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
CCDS55 TVSLQDAVTRRPPVLDESWIREQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGAAAATAH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 NGFSCSNCSMLSERKDVLTAHPAAPGPVSRVYSRDRNQKCDDCKGKRHLDAHPGRAGTLW
::::::::::::::::::::::::::::::::::::::::
CCDS55 NGFSCSNCSMLSERKDVLTAHPAAPGPVSRVYSRDRNQKCKSQSFKTQKKVCFPNLIFPF
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 HIWACAGYFLLQILRRIGAVGQAVSRTAWSALWLAVVAPGKAASGVFWWLGIGWYQFVTL
CCDS55 CKSQCLHYLSWRLKIIP
250
>>CCDS55078.1 SUN1 gene_id:23353|Hs108|chr7 (278 aa)
initn: 1456 init1: 1456 opt: 1456 Z-score: 1360.2 bits: 261.1 E(32554): 1.9e-69
Smith-Waterman score: 1456; 99.1% identity (100.0% similar) in 220 aa overlap (1-220:22-241)
10 20 30
pF1KA0 MDFSRLHMYSPPQCVPENTGYTYALSSSYSSDALDFETE
:::::::::::::::::::::::::::::::::::::::
CCDS55 MGRISPGSPGLPRTVWFEVVNMDFSRLHMYSPPQCVPENTGYTYALSSSYSSDALDFETE
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA0 HKLDPVFDSPRMSRRSLRLATTACTLGDGEAVGADSGTSSAVSLKNRAARTTKQRRSTNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 HKLDPVFDSPRMSRRSLRLATTACTLGDGEAVGADSGTSSAVSLKNRAARTTKQRRSTNK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA0 SAFSINHVSRQVTSSGVSYGGTVSLQDAVTRRPPVLDESWIREQTTVDHFWGLDDDGDLK
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
CCDS55 SAFSINHVSRQVTSSGVSHGGTVSLQDAVTRRPPVLDESWIREQTTVDHFWGLDDDGDLK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA0 GGNKAAIQGNGDVGVAAATAHNGFSCSNCSMLSERKDVLTAHPAAPGPVSRVYSRDRNQK
::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::
CCDS55 GGNKAAIQGNGDVGAAAATAHNGFSCSNCSMLSERKDVLTAHPAAPGPVSRVYSRDRNQK
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA0 CDDCKGKRHLDAHPGRAGTLWHIWACAGYFLLQILRRIGAVGQAVSRTAWSALWLAVVAP
:
CCDS55 CKSQSFKTQKKVCFPNLIFPFCKSQCLHYLSWRLKIIP
250 260 270
>>CCDS13978.1 SUN2 gene_id:25777|Hs108|chr22 (717 aa)
initn: 1150 init1: 757 opt: 1036 Z-score: 964.6 bits: 189.2 E(32554): 2.1e-47
Smith-Waterman score: 1215; 34.6% identity (60.4% similar) in 803 aa overlap (51-810:1-715)
30 40 50 60 70 80
pF1KA0 YTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLATTACTLGDGEAVGADSGTSSA
::::: :: : . :: .. ....:.: :
CCDS13 MSRRSQRL--TRYSQGDDDGSSSSGGSSVA
10 20
90 100 110 120 130
pF1KA0 VS----LKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSYGGTVSLQDAVTRRPPVLD
: .:. :: : :.:.: . .: . :. :. .. . : ..
CCDS13 GSQSTLFKDSPLRTLK-RKSSNMKRLSP---APQLGPSSDAHTSYYS--------ESLVH
30 40 50 60 70
140 150 160 170 180 190
pF1KA0 ESWIREQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGVAAATAHNGFSCSNCSMLSERKD
:::. ....... :: . :. :. : . .: : : : ::
CCDS13 ESWFPPRSSLEEL-----HGDANWGE--------DLRVRRRRGTGGSESSRASGLVGRKA
80 90 100 110 120
200 210 220 230 240 250
pF1KA0 VLTAHPAAPGPVSRVYSRDRNQKCDDCKGKRHLDAHPGRAGTLWHIWACAGYFLLQILRR
. .. : :: . :: : .: . . . ::
CCDS13 TEDFLGSSSG-----YSSE-----DDYVGYSDVDQQSSSSR----------------LR-
130 140 150
260 270 280 290 300 310
pF1KA0 IGAVGQAVSRTAWSALWLAVVAPGKAASGVFWWLGIGWYQFVTLISWLNVFLLTRCLRNI
.:::: : : ::.....::. ..:: : ::...: : :.::.::: . ..
CCDS13 -----SAVSR-AGSLLWMVATSPGRLFRLLYWWAGTTWYRLTTAASLLDVFVLTRRFSSL
160 170 180 190 200 210
320 330 340 350 360 370
pF1KA0 CKFLVLLIPLFLLLAGLSLRGQGNFF-----SFLPVL-NWASMHRTQRVDDPQDVFKPTT
:: .:.:: :::. :. : :. .: :.: .: . . ..: :. .
CCDS13 KTFLWFLLPL-LLLTCLTY-GAWYFYPYGLQTFHPALVSWWAAKDSRRPDEGWE------
220 230 240 250 260
380 390 400 410 420
pF1KA0 SRLKQP-LQGDSEAFPWHWMSGVEQQVASLSGQCHHHGENLRELTTLLQKLQARVDQM-E
.: ..: .:..... :: :.. : . . . : .. . :..:. : .
CCDS13 ARDSSPHFQAEQRV-----MSRVHSLERRLEALAAEFSSNWQKEAMRLERLELRQGAPGQ
270 280 290 300 310
430 440 450 460 470
pF1KA0 GGAAGPS-----------ASVRDAVGQPPRETDFMAFHQEH--EVRMSHL---EDILGKL
::..: : .: :.:. . . . : ::. .: : ::.. :.
CCDS13 GGGGGLSHEDTLALLEGLVSRREAALKEDFRRETAARIQEELSALRAEHQQDSEDLFKKI
320 330 340 350 360 370
480 490 500 510 520
pF1KA0 REKSEAIQKELEQTKQKTISAVGEQLLPT-VEHLQLELDQL---KSELSSWRHVKTGC--
. :. . ...: :.. : . :.. . :..:. ::: ..::.. ...
CCDS13 VRASQESEARIQQLKSEWQSMTQESFQESSVKELRRLEDQLAGLQQELAALALKQSSVAE
380 390 400 410 420 430
530 540 550 560 570 580
pF1KA0 ------ETVDAVQERVDVQVREMVKLLFSEDQQGGSLEQLLQRFSSQFVSKGDLQTMLRD
. ..::.. :. : .. .... ::. :::: ..:..::.
CCDS13 EVGLLPQQIQAVRDDVESQFPAWISQFLARG--GGGRVGLLQRE--------EMQAQLRE
440 450 460 470 480
590 600 610 620 630
pF1KA0 LQLQILRNVTHHVSVTKQLPTSEAVVS---AVSEAGASGITEAQARAIVNSALKLYSQDK
:. .:: ::. . . ::..: .... :. :.:: :.. ::..::. ::.:.
CCDS13 LESKILT----HVAEMQGKSAREAAASLSLTLQKEGVIGVTEEQVHHIVKQALQRYSEDR
490 500 510 520 530 540
640 650 660 670 680 690
pF1KA0 TGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWA
:..:.::::::.:..::::::::::::::.::::::::: ::::::..:::..::::::
CCDS13 IGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWA
550 560 570 580 590 600
700 710 720 730 740 750
pF1KA0 FKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLG
:.: ::. ::::: :.:.: ::::.::.:::...:::::::::..:.... :.:: :::
CCDS13 FQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLG
610 620 630 640 650 660
760 770 780 790 800 810
pF1KA0 QFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK
.:::::::: .: :. .. : ...:.:::::..:::::::::.:::::::::
CCDS13 KFTYDQDGEPIQTFH-FQAPTMATYQVVELRILTNWGHPEYTCIYRFRVHGEPAH
670 680 690 700 710
>>CCDS56231.1 SUN2 gene_id:25777|Hs108|chr22 (738 aa)
initn: 1150 init1: 757 opt: 1036 Z-score: 964.4 bits: 189.2 E(32554): 2.1e-47
Smith-Waterman score: 1249; 34.7% identity (61.4% similar) in 803 aa overlap (51-810:1-736)
30 40 50 60 70 80
pF1KA0 YTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLATTACTLGDGEAVGADSGTSSA
::::: :: : . :: .. ....:.: :
CCDS56 MSRRSQRL--TRYSQGDDDGSSSSGGSSVA
10 20
90 100 110 120 130
pF1KA0 VS----LKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSYGGTVSLQDAVTRRPPVLD
: .:. :: : :.:.: . .: . :. :. .. . : ..
CCDS56 GSQSTLFKDSPLRTLK-RKSSNMKRLSP---APQLGPSSDAHTSYYS--------ESLVH
30 40 50 60 70
140 150 160 170 180 190
pF1KA0 ESWIREQTTVDHFWGLDDDGDLKGGNKAAIQGNGDVGVAAATAHNGFSCSNCSMLSERKD
:::. ....... :: . :. :. : . .: : : : ::
CCDS56 ESWFPPRSSLEEL-----HGDANWGE--------DLRVRRRRGTGGSESSRASGLVGRK-
80 90 100 110 120
200 210 220 230 240 250
pF1KA0 VLTAHPAAPGPVSRVYSRDRNQKCDDCKGKRHLDAHPGRAGTLWHIWACAGYFLLQILRR
: : : :.: . .. .:.. ...: . ::: ..
CCDS56 ---ATEDFLGSSSGYSSEDDYVEDSEGRGSKVTETEPVSSFP-------AGYSDVDQQSS
130 140 150 160 170
260 270 280 290 300 310
pF1KA0 IGAVGQAVSRTAWSALWLAVVAPGKAASGVFWWLGIGWYQFVTLISWLNVFLLTRCLRNI
. . .:::: : : ::.....::. ..:: : ::...: : :.::.::: . ..
CCDS56 SSRLRSAVSR-AGSLLWMVATSPGRLFRLLYWWAGTTWYRLTTAASLLDVFVLTRRFSSL
180 190 200 210 220 230
320 330 340 350 360 370
pF1KA0 CKFLVLLIPLFLLLAGLSLRGQGNFF-----SFLPVL-NWASMHRTQRVDDPQDVFKPTT
:: .:.:: :::. :. : :. .: :.: .: . . ..: :. .
CCDS56 KTFLWFLLPL-LLLTCLTY-GAWYFYPYGLQTFHPALVSWWAAKDSRRPDEGWE------
240 250 260 270 280
380 390 400 410 420
pF1KA0 SRLKQP-LQGDSEAFPWHWMSGVEQQVASLSGQCHHHGENLRELTTLLQKLQARVDQM-E
.: ..: .:..... :: :.. : . . . : .. . :..:. : .
CCDS56 ARDSSPHFQAEQRV-----MSRVHSLERRLEALAAEFSSNWQKEAMRLERLELRQGAPGQ
290 300 310 320 330
430 440 450 460 470
pF1KA0 GGAAGPS-----------ASVRDAVGQPPRETDFMAFHQEH--EVRMSHL---EDILGKL
::..: : .: :.:. . . . : ::. .: : ::.. :.
CCDS56 GGGGGLSHEDTLALLEGLVSRREAALKEDFRRETAARIQEELSALRAEHQQDSEDLFKKI
340 350 360 370 380 390
480 490 500 510 520
pF1KA0 REKSEAIQKELEQTKQKTISAVGEQLLPT-VEHLQLELDQL---KSELSSWRHVKTGC--
. :. . ...: :.. : . :.. . :..:. ::: ..::.. ...
CCDS56 VRASQESEARIQQLKSEWQSMTQESFQESSVKELRRLEDQLAGLQQELAALALKQSSVAE
400 410 420 430 440 450
530 540 550 560 570 580
pF1KA0 ------ETVDAVQERVDVQVREMVKLLFSEDQQGGSLEQLLQRFSSQFVSKGDLQTMLRD
. ..::.. :. : .. .... ::. :::: ..:..::.
CCDS56 EVGLLPQQIQAVRDDVESQFPAWISQFLARG--GGGRVGLLQRE--------EMQAQLRE
460 470 480 490 500
590 600 610 620 630
pF1KA0 LQLQILRNVTHHVSVTKQLPTSEAVVS---AVSEAGASGITEAQARAIVNSALKLYSQDK
:. .:: ::. . . ::..: .... :. :.:: :.. ::..::. ::.:.
CCDS56 LESKILT----HVAEMQGKSAREAAASLSLTLQKEGVIGVTEEQVHHIVKQALQRYSEDR
510 520 530 540 550 560
640 650 660 670 680 690
pF1KA0 TGMVDFALESGGGSILSTRCSETYETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWA
:..:.::::::.:..::::::::::::::.::::::::: ::::::..:::..::::::
CCDS56 IGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWA
570 580 590 600 610 620
700 710 720 730 740 750
pF1KA0 FKGSQGYLVVRLSMMIHPAAFTLEHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLG
:.: ::. ::::: :.:.: ::::.::.:::...:::::::::..:.... :.:: :::
CCDS56 FQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLG
630 640 650 660 670 680
760 770 780 790 800 810
pF1KA0 QFTYDQDGESLQMFQALKRPDDTAFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK
.:::::::: .: :. .. : ...:.:::::..:::::::::.:::::::::
CCDS56 KFTYDQDGEPIQTFH-FQAPTMATYQVVELRILTNWGHPEYTCIYRFRVHGEPAH
690 700 710 720 730
>>CCDS64647.1 SUN3 gene_id:256979|Hs108|chr7 (345 aa)
initn: 670 init1: 461 opt: 621 Z-score: 585.4 bits: 118.0 E(32554): 2.8e-26
Smith-Waterman score: 621; 47.3% identity (75.0% similar) in 188 aa overlap (625-812:157-343)
600 610 620 630 640 650
pF1KA0 VTKQLPTSEAVVSAVSEAGASGITEAQARAIVNSALKLYSQDKTGMVDFALESGGGSILS
.:: .:: .:.. :.:.::.:.:.::.
CCDS64 DMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIE
130 140 150 160 170 180
660 670 680 690 700 710
pF1KA0 TRCSETYETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIH
. ::.:... : . :: . . : ...:::.:::.:::: ::::. ...:. :
CCDS64 AGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKII
190 200 210 220 230 240
720 730 740 750 760 770
pF1KA0 PAAFTLEHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQAL
:.: :.::: . .::.::::::::.:.:::. .. . : .:::: :.. : ..: :. :
CCDS64 PTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFE-L
250 260 270 280 290 300
780 790 800 810
pF1KA0 KRPDDTAFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK
.. . . :.: ::::::::.::::::::::: : :
CCDS64 QHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI
310 320 330 340
>>CCDS34636.1 SUN3 gene_id:256979|Hs108|chr7 (357 aa)
initn: 645 init1: 461 opt: 621 Z-score: 585.2 bits: 118.0 E(32554): 2.8e-26
Smith-Waterman score: 621; 47.3% identity (75.0% similar) in 188 aa overlap (625-812:169-355)
600 610 620 630 640 650
pF1KA0 VTKQLPTSEAVVSAVSEAGASGITEAQARAIVNSALKLYSQDKTGMVDFALESGGGSILS
.:: .:: .:.. :.:.::.:.:.::.
CCDS34 DMKDGMDNNHNWNTHGDPVEDPDHTEEVSNLVNYVLKKLREDQVEMADYALKSAGASIIE
140 150 160 170 180 190
660 670 680 690 700 710
pF1KA0 TRCSETYETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIH
. ::.:... : . :: . . : ...:::.:::.:::: ::::. ...:. :
CCDS34 AGTSESYKNNKAKLYWHGIGFLNHEMPPDIILQPDVYPGKCWAFPGSQGHTLIKLATKII
200 210 220 230 240 250
720 730 740 750 760 770
pF1KA0 PAAFTLEHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQAL
:.: :.::: . .::.::::::::.:.:::. .. . : .:::: :.. : ..: :. :
CCDS34 PTAVTMEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFE-L
260 270 280 290 300 310
780 790 800 810
pF1KA0 KRPDDTAFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK
.. . . :.: ::::::::.::::::::::: : :
CCDS34 QHAVSEYLLCVKLNIFSNWGHPKYTCLYRFRVHGTPGKHI
320 330 340 350
>>CCDS13209.1 SUN5 gene_id:140732|Hs108|chr20 (379 aa)
initn: 494 init1: 345 opt: 516 Z-score: 487.5 bits: 100.0 E(32554): 7.8e-21
Smith-Waterman score: 516; 38.2% identity (66.4% similar) in 238 aa overlap (572-808:136-361)
550 560 570 580 590 600
pF1KA0 EMVKLLFSEDQQGGSLEQLLQRFSSQFVSKGDLQTMLRDLQLQILRNVTHHVSVTKQLPT
: ::. :: : ..: :: . ..:
CCDS13 GILLLCAFGFWMFSIHLPSKMKVWQDDSINGPLQS-LRLYQ----EKVRHHSGEIQDLRG
110 120 130 140 150 160
610 620 630 640 650 660
pF1KA0 S-EAVVSAVSEAGASGITEAQARAIVNSALKLYSQDKTGMVDFALESGGGSILSTRCSET
: . ... ..: : . . .:. : .:. : ::::.: :.:: . : :
CCDS13 SMNQLIAKLQEMEAMSDEQKMAQKI----MKMIHGDYIEKPDFALKSIGASIDFEHTSVT
170 180 190 200 210
670 680 690 700 710 720
pF1KA0 YETKTALMSLFGIPLWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMMIHPAAFTL
:. . : : :: ..: : :...:.. :::::::.:..: ....:.. .. . .::
CCDS13 YNHEKAHSYWNWIQLWNYAQPPDVILEPNVTPGNCWAFEGDRGQVTIQLAQKVYLSNLTL
220 230 240 250 260 270
730 740 750 760 770 780
pF1KA0 EHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDDT
.:::::.: .:....:::::..::.:. .:: .:: : . : . .::: ..:
CCDS13 QHIPKTISLSGSLDTAPKDFVIYGMEGSPKEE-VFLGAFQF-QPENIIQMFPLQNQPA-R
280 290 300 310 320 330
790 800 810
pF1KA0 AFQIVELRIFSNWGHPEYTCLYRFRVHGEPVK
::. :...: ::::.: .::::: ::::
CCDS13 AFSAVKVKISSNWGNPGFTCLYRVRVHGSVAPPREQPHQNPYPKRD
340 350 360 370
812 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 01:02:05 2016 done: Fri Nov 4 01:02:05 2016
Total Scan time: 4.340 Total Display time: 0.140
Function used was FASTA [36.3.4 Apr, 2011]