Result of FASTA (omim) for
pF1KA0744
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0744, 590 aa
1>>>pF1KA0744 590 - 590 aa - 590 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.3925+/-0.000374; mu= -3.3375+/- 0.023
mean_var=290.6650+/-58.729, 0's: 0 Z-trim(122.1): 160 B-trim: 588 in 1/57
Lambda= 0.075228
statistics sampled from 39570 (39748) to 39570 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.77), E-opt: 0.2 (0.466), width: 16
Scan time: 13.460
The best scores are: opt bits E(85289)
NP_055522 (OMIM: 606543) histone deacetylase 9 iso ( 590) 3843 430.6 7.1e-120
NP_001308829 (OMIM: 606543) histone deacetylase 9 ( 590) 3843 430.6 7.1e-120
NP_001308799 (OMIM: 606543) histone deacetylase 9 ( 612) 3843 430.6 7.3e-120
NP_001308828 (OMIM: 606543) histone deacetylase 9 ( 593) 3827 428.9 2.4e-119
NP_001308803 (OMIM: 606543) histone deacetylase 9 ( 593) 3827 428.9 2.4e-119
NP_001308831 (OMIM: 606543) histone deacetylase 9 ( 593) 3827 428.9 2.4e-119
NP_001308798 (OMIM: 606543) histone deacetylase 9 ( 615) 3827 428.9 2.4e-119
NP_001308819 (OMIM: 606543) histone deacetylase 9 ( 588) 3816 427.7 5.4e-119
XP_016868319 (OMIM: 606543) PREDICTED: histone dea ( 607) 3816 427.7 5.5e-119
NP_001308804 (OMIM: 606543) histone deacetylase 9 ( 595) 3815 427.6 5.9e-119
NP_001308813 (OMIM: 606543) histone deacetylase 9 ( 591) 3800 425.9 1.8e-118
NP_001308830 (OMIM: 606543) histone deacetylase 9 ( 591) 3800 425.9 1.8e-118
XP_016868318 (OMIM: 606543) PREDICTED: histone dea ( 610) 3800 425.9 1.9e-118
NP_478056 (OMIM: 606543) histone deacetylase 9 iso (1011) 3744 420.0 1.9e-116
XP_016868315 (OMIM: 606543) PREDICTED: histone dea (1066) 3744 420.0 1.9e-116
NP_848510 (OMIM: 606543) histone deacetylase 9 iso (1066) 3744 420.0 1.9e-116
XP_011513940 (OMIM: 606543) PREDICTED: histone dea (1069) 3728 418.3 6.5e-116
NP_848512 (OMIM: 606543) histone deacetylase 9 iso (1069) 3728 418.3 6.5e-116
XP_011513941 (OMIM: 606543) PREDICTED: histone dea (1069) 3728 418.3 6.5e-116
XP_011513931 (OMIM: 606543) PREDICTED: histone dea (1088) 3728 418.3 6.5e-116
XP_011513938 (OMIM: 606543) PREDICTED: histone dea (1071) 3716 417.0 1.6e-115
XP_011513939 (OMIM: 606543) PREDICTED: histone dea (1071) 3716 417.0 1.6e-115
XP_011513937 (OMIM: 606543) PREDICTED: histone dea (1074) 3700 415.3 5.3e-115
XP_011513951 (OMIM: 606543) PREDICTED: histone dea (1074) 3700 415.3 5.3e-115
XP_011513950 (OMIM: 606543) PREDICTED: histone dea (1074) 3700 415.3 5.3e-115
XP_011513933 (OMIM: 606543) PREDICTED: histone dea (1096) 3700 415.3 5.4e-115
NP_001308815 (OMIM: 606543) histone deacetylase 9 ( 559) 3645 409.1 2e-113
NP_001308825 (OMIM: 606543) histone deacetylase 9 ( 562) 3629 407.4 6.7e-113
NP_001191077 (OMIM: 606543) histone deacetylase 9 ( 562) 3629 407.4 6.7e-113
NP_001308816 (OMIM: 606543) histone deacetylase 9 ( 560) 3602 404.4 5.1e-112
XP_011513948 (OMIM: 606543) PREDICTED: histone dea (1035) 3546 398.5 5.6e-110
XP_011513946 (OMIM: 606543) PREDICTED: histone dea (1038) 3530 396.8 1.9e-109
XP_011513947 (OMIM: 606543) PREDICTED: histone dea (1038) 3530 396.8 1.9e-109
XP_011513944 (OMIM: 606543) PREDICTED: histone dea (1043) 3502 393.8 1.5e-108
XP_016868316 (OMIM: 606543) PREDICTED: histone dea (1043) 3502 393.8 1.5e-108
XP_011513943 (OMIM: 606543) PREDICTED: histone dea (1043) 3502 393.8 1.5e-108
NP_001308807 (OMIM: 606543) histone deacetylase 9 ( 654) 3181 358.8 3.3e-98
NP_001308805 (OMIM: 606543) histone deacetylase 9 ( 506) 3141 354.4 5.4e-97
XP_016868321 (OMIM: 606543) PREDICTED: histone dea ( 525) 3141 354.4 5.6e-97
NP_001308827 (OMIM: 606543) histone deacetylase 9 ( 554) 2195 251.7 4.7e-66
NP_001308814 (OMIM: 606543) histone deacetylase 9 ( 554) 2195 251.7 4.7e-66
NP_001308800 (OMIM: 606543) histone deacetylase 9 ( 573) 2192 251.4 6e-66
NP_001308818 (OMIM: 606543) histone deacetylase 9 ( 516) 2176 249.6 1.9e-65
NP_001308808 (OMIM: 606543) histone deacetylase 9 ( 547) 2176 249.6 1.9e-65
XP_016868320 (OMIM: 606543) PREDICTED: histone dea ( 566) 2176 249.7 2e-65
NP_001308802 (OMIM: 606543) histone deacetylase 9 ( 569) 2176 249.7 2e-65
NP_001191075 (OMIM: 606543) histone deacetylase 9 ( 549) 2173 249.3 2.4e-65
NP_001308823 (OMIM: 606543) histone deacetylase 9 ( 549) 2173 249.3 2.4e-65
NP_001308824 (OMIM: 606543) histone deacetylase 9 ( 549) 2173 249.3 2.4e-65
NP_001308801 (OMIM: 606543) histone deacetylase 9 ( 571) 2173 249.3 2.5e-65
>>NP_055522 (OMIM: 606543) histone deacetylase 9 isoform (590 aa)
initn: 3843 init1: 3843 opt: 3843 Z-score: 2273.1 bits: 430.6 E(85289): 7.1e-120
Smith-Waterman score: 3843; 100.0% identity (100.0% similar) in 590 aa overlap (1-590:1-590)
10 20 30 40 50 60
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWYTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWYTAA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 HHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 HHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 PLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 EQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 GVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 QIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLG
490 500 510 520 530 540
550 560 570 580 590
pF1KA0 QVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
550 560 570 580 590
>>NP_001308829 (OMIM: 606543) histone deacetylase 9 isof (590 aa)
initn: 3843 init1: 3843 opt: 3843 Z-score: 2273.1 bits: 430.6 E(85289): 7.1e-120
Smith-Waterman score: 3843; 100.0% identity (100.0% similar) in 590 aa overlap (1-590:1-590)
10 20 30 40 50 60
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWYTAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWYTAA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 HHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 PLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 EQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 GVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 QIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLG
490 500 510 520 530 540
550 560 570 580 590
pF1KA0 QVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
550 560 570 580 590
>>NP_001308799 (OMIM: 606543) histone deacetylase 9 isof (612 aa)
initn: 3843 init1: 3843 opt: 3843 Z-score: 2272.9 bits: 430.6 E(85289): 7.3e-120
Smith-Waterman score: 3843; 100.0% identity (100.0% similar) in 590 aa overlap (1-590:23-612)
10 20 30
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVD
::::::::::::::::::::::::::::::::::::::
NP_001 MMSSPAQPDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVD
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA0 PVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQE
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA0 LLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATK
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA0 DTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKT
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA0 ASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA0 NNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVP
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA0 SQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQH
370 380 390 400 410 420
400 410 420 430 440 450
pF1KA0 LLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQST
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA0 LAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQED
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQED
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA0 RAPSSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RAPSSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGK
550 560 570 580 590 600
580 590
pF1KA0 DLAPGFVIKVII
::::::::::::
NP_001 DLAPGFVIKVII
610
>>NP_001308828 (OMIM: 606543) histone deacetylase 9 isof (593 aa)
initn: 3278 init1: 3278 opt: 3827 Z-score: 2263.7 bits: 428.9 E(85289): 2.4e-119
Smith-Waterman score: 3827; 99.5% identity (99.5% similar) in 593 aa overlap (1-590:1-593)
10 20 30 40 50 60
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
10 20 30 40 50 60
70 80 90 100 110
pF1KA0 KQLLIAEFQKQHENLTRQHQAQLQEHIK---ELLAIKQQQELLEKEQKLEQQRQEQEVER
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_001 KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 HRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA0 TAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAER
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA0 RSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPT
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA0 PHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQT
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA0 LRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA0 LHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA0 YQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDD
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA0 TLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
550 560 570 580 590
>>NP_001308803 (OMIM: 606543) histone deacetylase 9 isof (593 aa)
initn: 3278 init1: 3278 opt: 3827 Z-score: 2263.7 bits: 428.9 E(85289): 2.4e-119
Smith-Waterman score: 3827; 99.5% identity (99.5% similar) in 593 aa overlap (1-590:1-593)
10 20 30 40 50 60
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
10 20 30 40 50 60
70 80 90 100 110
pF1KA0 KQLLIAEFQKQHENLTRQHQAQLQEHIK---ELLAIKQQQELLEKEQKLEQQRQEQEVER
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_001 KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 HRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA0 TAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAER
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA0 RSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPT
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA0 PHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQT
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA0 LRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA0 LHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA0 YQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDD
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA0 TLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
550 560 570 580 590
>>NP_001308831 (OMIM: 606543) histone deacetylase 9 isof (593 aa)
initn: 3278 init1: 3278 opt: 3827 Z-score: 2263.7 bits: 428.9 E(85289): 2.4e-119
Smith-Waterman score: 3827; 99.5% identity (99.5% similar) in 593 aa overlap (1-590:1-593)
10 20 30 40 50 60
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
10 20 30 40 50 60
70 80 90 100 110
pF1KA0 KQLLIAEFQKQHENLTRQHQAQLQEHIK---ELLAIKQQQELLEKEQKLEQQRQEQEVER
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::
NP_001 KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQEVER
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 HRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA0 TAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAER
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA0 RSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPT
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA0 PHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQT
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA0 LRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVP
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA0 LHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA0 YQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDD
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA0 TLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
:::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
550 560 570 580 590
>>NP_001308798 (OMIM: 606543) histone deacetylase 9 isof (615 aa)
initn: 3278 init1: 3278 opt: 3827 Z-score: 2263.5 bits: 428.9 E(85289): 2.4e-119
Smith-Waterman score: 3827; 99.5% identity (99.5% similar) in 593 aa overlap (1-590:23-615)
10 20 30
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVD
::::::::::::::::::::::::::::::::::::::
NP_001 MMSSPAQPDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVD
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA0 PVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIK---ELLAIKQ
:::::::::::::::::::::::::::::::::::::::::::::::::: :::::::
NP_001 PVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQ
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA0 QQELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKS
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA0 ATKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ATKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPL
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA0 RKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGP
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA0 SSPNNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSPNNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLP
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA0 AVPSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVPSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQAL
370 380 390 400 410 420
400 410 420 430 440 450
pF1KA0 LQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLP
430 440 450 460 470 480
460 470 480 490 500 510
pF1KA0 QSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAM
490 500 510 520 530 540
520 530 540 550 560 570
pF1KA0 QEDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQV
550 560 570 580 590 600
580 590
pF1KA0 IGKDLAPGFVIKVII
:::::::::::::::
NP_001 IGKDLAPGFVIKVII
610
>>NP_001308819 (OMIM: 606543) histone deacetylase 9 isof (588 aa)
initn: 3816 init1: 2692 opt: 3816 Z-score: 2257.3 bits: 427.7 E(85289): 5.4e-119
Smith-Waterman score: 3816; 99.7% identity (99.7% similar) in 590 aa overlap (1-590:1-588)
10 20 30 40 50 60
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLWYTAA
:::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
NP_001 EQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKLW--AA
130 140 150 160 170
190 200 210 220 230 240
pF1KA0 HHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVAERRSS
180 190 200 210 220 230
250 260 270 280 290 300
pF1KA0 PLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHA
240 250 260 270 280 290
310 320 330 340 350 360
pF1KA0 EQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQ
300 310 320 330 340 350
370 380 390 400 410 420
pF1KA0 GVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHP
360 370 380 390 400 410
430 440 450 460 470 480
pF1KA0 QSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQ
420 430 440 450 460 470
490 500 510 520 530 540
pF1KA0 QIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLG
480 490 500 510 520 530
550 560 570 580 590
pF1KA0 QVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
540 550 560 570 580
>>XP_016868319 (OMIM: 606543) PREDICTED: histone deacety (607 aa)
initn: 3816 init1: 2692 opt: 3816 Z-score: 2257.1 bits: 427.7 E(85289): 5.5e-119
Smith-Waterman score: 3816; 99.7% identity (99.7% similar) in 590 aa overlap (1-590:20-607)
10 20 30 40
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVV
:::::::::::::::::::::::::::::::::::::::::
XP_016 MHNKTDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVV
10 20 30 40 50 60
50 60 70 80 90 100
pF1KA0 REKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 REKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KA0 KEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDTP
130 140 150 160 170 180
170 180 190 200 210 220
pF1KA0 TNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASE
::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::
XP_016 TNGKNHSVSRHPKLW--AAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASE
190 200 210 220 230
230 240 250 260 270 280
pF1KA0 PNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNG
240 250 260 270 280 290
290 300 310 320 330 340
pF1KA0 PTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQL
300 310 320 330 340 350
350 360 370 380 390 400
pF1KA0 NASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLL
360 370 380 390 400 410
410 420 430 440 450 460
pF1KA0 KEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQ
420 430 440 450 460 470
470 480 490 500 510 520
pF1KA0 LVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAP
480 490 500 510 520 530
530 540 550 560 570 580
pF1KA0 SSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLA
540 550 560 570 580 590
590
pF1KA0 PGFVIKVII
:::::::::
XP_016 PGFVIKVII
600
>>NP_001308804 (OMIM: 606543) histone deacetylase 9 isof (595 aa)
initn: 3822 init1: 2962 opt: 3815 Z-score: 2256.6 bits: 427.6 E(85289): 5.9e-119
Smith-Waterman score: 3815; 99.0% identity (99.0% similar) in 595 aa overlap (1-590:1-595)
10 20 30 40 50 60
pF1KA0 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREKQLQQELLLIQQQQQIQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEKEQKLEQQRQEQEVERHRR
70 80 90 100 110 120
130 140 150 160 170
pF1KA0 EQQLPPLRGKDRGRER-----AVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKL
::::::::::::::: :::::::::::::::::::::::::::::::::::::::
NP_001 EQQLPPLRGKDRGRESKRHQGAVASTEVKQKLQEFLLSKSATKDTPTNGKNHSVSRHPKL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA0 WYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVA
190 200 210 220 230 240
240 250 260 270 280 290
pF1KA0 ERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLP
250 260 270 280 290 300
300 310 320 330 340 350
pF1KA0 PTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCET
310 320 330 340 350 360
360 370 380 390 400 410
pF1KA0 QTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGG
370 380 390 400 410 420
420 430 440 450 460 470
pF1KA0 VPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQ
430 440 450 460 470 480
480 490 500 510 520 530
pF1KA0 KQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACV
490 500 510 520 530 540
540 550 560 570 580 590
pF1KA0 DDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII
550 560 570 580 590
590 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 19:40:08 2016 done: Wed Nov 2 19:40:10 2016
Total Scan time: 13.460 Total Display time: 0.150
Function used was FASTA [36.3.4 Apr, 2011]