Result of FASTA (omim) for
pF1KA0682
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0682, 960 aa
1>>>pF1KA0682 960 - 960 aa - 960 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.7460+/-0.00051; mu= 14.7509+/- 0.033
mean_var=317.8427+/-71.226, 0's: 0 Z-trim(118.1): 96 B-trim: 3360 in 2/52
Lambda= 0.071940
statistics sampled from 30657 (30779) to 30657 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.361), width: 16
Scan time: 13.150
The best scores are: opt bits E(85289)
NP_057280 (OMIM: 616444) probable RNA-binding prot ( 960) 6226 661.2 6.9e-189
NP_001140171 (OMIM: 616444) probable RNA-binding p ( 960) 6226 661.2 6.9e-189
NP_001140170 (OMIM: 616444) probable RNA-binding p ( 960) 6226 661.2 6.9e-189
XP_016875770 (OMIM: 616444) PREDICTED: probable RN ( 936) 3898 419.6 3.7e-116
XP_016875769 (OMIM: 616444) PREDICTED: probable RN ( 936) 3898 419.6 3.7e-116
XP_011526210 (OMIM: 607430) PREDICTED: DAZ-associa ( 521) 284 44.2 0.0022
XP_011526211 (OMIM: 607430) PREDICTED: DAZ-associa ( 521) 284 44.2 0.0022
XP_011526207 (OMIM: 607430) PREDICTED: DAZ-associa ( 549) 284 44.2 0.0022
XP_011526206 (OMIM: 607430) PREDICTED: DAZ-associa ( 550) 284 44.2 0.0023
XP_011526209 (OMIM: 607430) PREDICTED: DAZ-associa ( 548) 282 44.0 0.0026
XP_011526208 (OMIM: 607430) PREDICTED: DAZ-associa ( 549) 282 44.0 0.0026
>>NP_057280 (OMIM: 616444) probable RNA-binding protein (960 aa)
initn: 6226 init1: 6226 opt: 6226 Z-score: 3512.1 bits: 661.2 E(85289): 6.9e-189
Smith-Waterman score: 6226; 99.4% identity (99.9% similar) in 960 aa overlap (1-960:1-960)
10 20 30 40 50 60
pF1KA0 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 AGQLEKLKEDTEFQEFLSVHRRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
NP_057 AGQLEKLKEDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EAEEEDSSATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
NP_057 EAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 AELQETFGRFGSLGRVLLPEGGTTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
:.::::::.::::::::::::: :::::::::::::::::::::::::::::::::::::
NP_057 AQLQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 VFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 VFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
910 920 930 940 950 960
>>NP_001140171 (OMIM: 616444) probable RNA-binding prote (960 aa)
initn: 6226 init1: 6226 opt: 6226 Z-score: 3512.1 bits: 661.2 E(85289): 6.9e-189
Smith-Waterman score: 6226; 99.4% identity (99.9% similar) in 960 aa overlap (1-960:1-960)
10 20 30 40 50 60
pF1KA0 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 AGQLEKLKEDTEFQEFLSVHRRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
NP_001 AGQLEKLKEDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EAEEEDSSATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
NP_001 EAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 AELQETFGRFGSLGRVLLPEGGTTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
:.::::::.::::::::::::: :::::::::::::::::::::::::::::::::::::
NP_001 AQLQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 VFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
910 920 930 940 950 960
>>NP_001140170 (OMIM: 616444) probable RNA-binding prote (960 aa)
initn: 6226 init1: 6226 opt: 6226 Z-score: 3512.1 bits: 661.2 E(85289): 6.9e-189
Smith-Waterman score: 6226; 99.4% identity (99.9% similar) in 960 aa overlap (1-960:1-960)
10 20 30 40 50 60
pF1KA0 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 AGQLEKLKEDTEFQEFLSVHRRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
NP_001 AGQLEKLKEDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EAEEEDSSATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
NP_001 EAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 AELQETFGRFGSLGRVLLPEGGTTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
:.::::::.::::::::::::: :::::::::::::::::::::::::::::::::::::
NP_001 AQLQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 VFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
910 920 930 940 950 960
>>XP_016875770 (OMIM: 616444) PREDICTED: probable RNA-bi (936 aa)
initn: 3877 init1: 3877 opt: 3898 Z-score: 2206.4 bits: 419.6 E(85289): 3.7e-116
Smith-Waterman score: 6006; 96.9% identity (97.4% similar) in 960 aa overlap (1-960:1-936)
10 20 30 40 50 60
pF1KA0 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 AGQLEKLKEDTEFQEFLSVHRRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
XP_016 AGQLEKLKEDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EAEEEDSSATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
XP_016 EAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGR
:::::::::::::::::::::::::::::::::: ::
XP_016 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTG------------------------GR
310 320 330
370 380 390 400 410 420
pF1KA0 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
340 350 360 370 380 390
430 440 450 460 470 480
pF1KA0 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
400 410 420 430 440 450
490 500 510 520 530 540
pF1KA0 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
460 470 480 490 500 510
550 560 570 580 590 600
pF1KA0 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
520 530 540 550 560 570
610 620 630 640 650 660
pF1KA0 AELQETFGRFGSLGRVLLPEGGTTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
:.::::::.::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_016 AQLQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
580 590 600 610 620 630
670 680 690 700 710 720
pF1KA0 VFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
640 650 660 670 680 690
730 740 750 760 770 780
pF1KA0 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
700 710 720 730 740 750
790 800 810 820 830 840
pF1KA0 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
760 770 780 790 800 810
850 860 870 880 890 900
pF1KA0 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
820 830 840 850 860 870
910 920 930 940 950 960
pF1KA0 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
880 890 900 910 920 930
>>XP_016875769 (OMIM: 616444) PREDICTED: probable RNA-bi (936 aa)
initn: 3877 init1: 3877 opt: 3898 Z-score: 2206.4 bits: 419.6 E(85289): 3.7e-116
Smith-Waterman score: 6006; 96.9% identity (97.4% similar) in 960 aa overlap (1-960:1-936)
10 20 30 40 50 60
pF1KA0 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSRLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTKDGKFRKFGFIGFKSEEEAQKAQK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HFNKSFIDTSRITVEFCKSFGDPAKPRAWSKHAQKPSQPKQPPKDSTTPEIKKDEKKKKV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 AGQLEKLKEDTEFQEFLSVHRRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
XP_016 AGQLEKLKEDTEFQEFLSVHQRRAQAATWANDGLDAEPSKGKSKPASDYLNFDSDSGQES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEGAGEDLEEEASLEPKAAVQKELSDMDYLKSKMVKAGSSSSSEEEESEDEAVHCDEGS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EAEEEDSSATPVLQERDSRGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
XP_016 EAEEEDSSATPVLQERDSKGAGQEQGMPAGKKRPPEARAETEKPANQKEPTTCHTVKLRG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTGYIFVDFSNEEEVKQALKCNREYMGGR
:::::::::::::::::::::::::::::::::: ::
XP_016 APFNVTEKNVMEFLAPLKPVAIRIVRNAHGNKTG------------------------GR
310 320 330
370 380 390 400 410 420
pF1KA0 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFVRNLPYTSTEEDLEK
340 350 360 370 380 390
430 440 450 460 470 480
pF1KA0 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTI
400 410 420 430 440 450
490 500 510 520 530 540
pF1KA0 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KKEASEDASALGSSSYKKKKEAQDKANSASSHNWNTLFMGPNAVADAIAQKYNATKSQVF
460 470 480 490 500 510
550 560 570 580 590 600
pF1KA0 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DHETKGSVAVRVALGETQLVQEVRRFLIDNGVSLDSFSQAAAERSKTVILVKNLPAGTLA
520 530 540 550 560 570
610 620 630 640 650 660
pF1KA0 AELQETFGRFGSLGRVLLPEGGTTAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
:.::::::.::::::::::::: :::::::::::::::::::::::::::::::::::::
XP_016 AQLQETFGHFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLYLEWAPVG
580 590 600 610 620 630
670 680 690 700 710 720
pF1KA0 VFSSAAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VFSSTAPQKKKLQDTPSEPMEKDPAEPETVPDGETPEDENPTEEGADNSSAKMEEEEEEE
640 650 660 670 680 690
730 740 750 760 770 780
pF1KA0 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVE
700 710 720 730 740 750
790 800 810 820 830 840
pF1KA0 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YRKPEQAQKALKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSKILVRNIP
760 770 780 790 800 810
850 860 870 880 890 900
pF1KA0 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHL
820 830 840 850 860 870
910 920 930 940 950 960
pF1KA0 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YGRRLVLEWADSEVTLQALRRKTAAHFHEPPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
880 890 900 910 920 930
>>XP_011526210 (OMIM: 607430) PREDICTED: DAZ-associated (521 aa)
initn: 261 init1: 117 opt: 284 Z-score: 181.8 bits: 44.2 E(85289): 0.0022
Smith-Waterman score: 284; 30.7% identity (60.9% similar) in 192 aa overlap (725-911:148-332)
700 710 720 730 740 750
pF1KA0 TPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVG
:: :: ::. .:...::.: :. ::. :
XP_011 CMGAGSTPQETWSLGAPCSGTLVAVQLLPWESTPGRKLFVGGLDWSTTQETLRSYFSQYG
120 130 140 150 160 170
760 770 780 790 800 810
pF1KA0 TVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR-ISERAT
: .: : : :. : :::::... :. . .: . . :..::.... . . :.
XP_011 EVVDCVIMKDKTTNQ---SRGFGFVKFKDPNCVGTVLAS-RPHTLDGRNIDPKPCTPRGM
180 190 200 210 220 230
820 830 840 850 860
pF1KA0 KPAVTLARK--KQVPRKQTT--SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTG
.: : .. .. ::.... .::.: .:: . :.:: :. :: . : .
XP_011 QPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAE-
240 250 260 270 280 290
870 880 890 900 910 920
pF1KA0 TGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHFHE
:::::. : .:.. .: : :. ..:... .. :.
XP_011 KQRPRGFGFITFEDEQSVDQAVNMHFHD--IMGKKVEVKRAEPRDSKSQAPGQPGASQWG
300 310 320 330 340 350
930 940 950 960
pF1KA0 PPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
XP_011 SRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIV
360 370 380 390 400 410
>>XP_011526211 (OMIM: 607430) PREDICTED: DAZ-associated (521 aa)
initn: 261 init1: 117 opt: 284 Z-score: 181.8 bits: 44.2 E(85289): 0.0022
Smith-Waterman score: 284; 30.7% identity (60.9% similar) in 192 aa overlap (725-911:148-332)
700 710 720 730 740 750
pF1KA0 TPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVG
:: :: ::. .:...::.: :. ::. :
XP_011 CMGAGSTPQETWSLGAPCSGTLVAVQLLPWESTPGRKLFVGGLDWSTTQETLRSYFSQYG
120 130 140 150 160 170
760 770 780 790 800 810
pF1KA0 TVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR-ISERAT
: .: : : :. : :::::... :. . .: . . :..::.... . . :.
XP_011 EVVDCVIMKDKTTNQ---SRGFGFVKFKDPNCVGTVLAS-RPHTLDGRNIDPKPCTPRGM
180 190 200 210 220 230
820 830 840 850 860
pF1KA0 KPAVTLARK--KQVPRKQTT--SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTG
.: : .. .. ::.... .::.: .:: . :.:: :. :: . : .
XP_011 QPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAE-
240 250 260 270 280 290
870 880 890 900 910 920
pF1KA0 TGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHFHE
:::::. : .:.. .: : :. ..:... .. :.
XP_011 KQRPRGFGFITFEDEQSVDQAVNMHFHD--IMGKKVEVKRAEPRDSKSQAPGQPGASQWG
300 310 320 330 340 350
930 940 950 960
pF1KA0 PPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
XP_011 SRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIV
360 370 380 390 400 410
>>XP_011526207 (OMIM: 607430) PREDICTED: DAZ-associated (549 aa)
initn: 261 init1: 117 opt: 284 Z-score: 181.6 bits: 44.2 E(85289): 0.0022
Smith-Waterman score: 284; 30.7% identity (60.9% similar) in 192 aa overlap (725-911:148-332)
700 710 720 730 740 750
pF1KA0 TPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVG
:: :: ::. .:...::.: :. ::. :
XP_011 CMGAGSTPQETWSLGAPCSGTLVAVQLLPWESTPGRKLFVGGLDWSTTQETLRSYFSQYG
120 130 140 150 160 170
760 770 780 790 800 810
pF1KA0 TVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR-ISERAT
: .: : : :. : :::::... :. . .: . . :..::.... . . :.
XP_011 EVVDCVIMKDKTTNQ---SRGFGFVKFKDPNCVGTVLAS-RPHTLDGRNIDPKPCTPRGM
180 190 200 210 220 230
820 830 840 850 860
pF1KA0 KPAVTLARK--KQVPRKQTT--SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTG
.: : .. .. ::.... .::.: .:: . :.:: :. :: . : .
XP_011 QPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAE-
240 250 260 270 280 290
870 880 890 900 910 920
pF1KA0 TGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHFHE
:::::. : .:.. .: : :. ..:... .. :.
XP_011 KQRPRGFGFITFEDEQSVDQAVNMHFHD--IMGKKVEVKRAEPRDSKSQAPGQPGASQWG
300 310 320 330 340 350
930 940 950 960
pF1KA0 PPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
XP_011 SRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIV
360 370 380 390 400 410
>>XP_011526206 (OMIM: 607430) PREDICTED: DAZ-associated (550 aa)
initn: 261 init1: 117 opt: 284 Z-score: 181.6 bits: 44.2 E(85289): 0.0023
Smith-Waterman score: 284; 30.7% identity (60.9% similar) in 192 aa overlap (725-911:148-332)
700 710 720 730 740 750
pF1KA0 TPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVG
:: :: ::. .:...::.: :. ::. :
XP_011 CMGAGSTPQETWSLGAPCSGTLVAVQLLPWESTPGRKLFVGGLDWSTTQETLRSYFSQYG
120 130 140 150 160 170
760 770 780 790 800 810
pF1KA0 TVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR-ISERAT
: .: : : :. : :::::... :. . .: . . :..::.... . . :.
XP_011 EVVDCVIMKDKTTNQ---SRGFGFVKFKDPNCVGTVLAS-RPHTLDGRNIDPKPCTPRGM
180 190 200 210 220 230
820 830 840 850 860
pF1KA0 KPAVTLARK--KQVPRKQTT--SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTG
.: : .. .. ::.... .::.: .:: . :.:: :. :: . : .
XP_011 QPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAE-
240 250 260 270 280 290
870 880 890 900 910 920
pF1KA0 TGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHFHE
:::::. : .:.. .: : :. ..:... .. :.
XP_011 KQRPRGFGFITFEDEQSVDQAVNMHFHD--IMGKKVEVKRAEPRDSKSQAPGQPGASQWG
300 310 320 330 340 350
930 940 950 960
pF1KA0 PPKKKRSVVLDEILEQLEGSDSDSEEQTLQL
XP_011 SRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIV
360 370 380 390 400 410
>>XP_011526209 (OMIM: 607430) PREDICTED: DAZ-associated (548 aa)
initn: 208 init1: 117 opt: 282 Z-score: 180.5 bits: 44.0 E(85289): 0.0026
Smith-Waterman score: 282; 30.9% identity (60.7% similar) in 191 aa overlap (725-911:148-331)
700 710 720 730 740 750
pF1KA0 TPEDENPTEEGADNSSAKMEEEEEEEEEEEESLPGCTLFIKNLNFDTTEEKLKEVFSKVG
:: :: ::. .:...::.: :. ::. :
XP_011 CMGAGSTPQETWSLGAPCSGTLVAVQLLPWESTPGRKLFVGGLDWSTTQETLRSYFSQYG
120 130 140 150 160 170
760 770 780 790 800 810
pF1KA0 TVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVVDGHKLEVR-ISERAT
: .: : : :. : :::::... :. . .: . . :..::.... . . :.
XP_011 EVVDCVIMKDKTTNQ---SRGFGFVKFKDPNCVGTVLAS-RPHTLDGRNIDPKPCTPRGM
180 190 200 210 220 230
820 830 840 850 860 870
pF1KA0 KPAVTLARKK-QVPRKQTT--SKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGT
.: : .. . ::.... .::.: .:: . :.:: :. :: . : .
XP_011 QPERTRPKEGWKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAE-K
240 250 260 270 280 290
880 890 900 910 920 930
pF1KA0 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHFHEP
:::::. : .:.. .: : :. ..:... .. :.
XP_011 QRPRGFGFITFEDEQSVDQAVNMHFHD--IMGKKVEVKRAEPRDSKSQAPGQPGASQWGS
300 310 320 330 340 350
940 950 960
pF1KA0 PKKKRSVVLDEILEQLEGSDSDSEEQTLQL
XP_011 RVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVS
360 370 380 390 400 410
960 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 19:31:31 2016 done: Wed Nov 2 19:31:33 2016
Total Scan time: 13.150 Total Display time: 0.190
Function used was FASTA [36.3.4 Apr, 2011]