FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA0598, 561 aa
  1>>>pF1KA0598 561 - 561 aa - 561 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7561+/-0.000902; mu= 15.9809+/- 0.054
 mean_var=65.0878+/-13.074, 0's: 0 Z-trim(104.9): 27  B-trim: 0 in 0/51
 Lambda= 0.158973
 statistics sampled from 8124 (8140) to 8124 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.25), width:  16
 Scan time:  2.770

The best scores are:                                      opt bits E(32554)
CCDS7638.1 CHST15 gene_id:51363|Hs108|chr10        ( 561) 3869 896.4       0
CCDS55731.1 CHST15 gene_id:51363|Hs108|chr10       ( 506) 3126 726.0 2.6e-209


>>CCDS7638.1 CHST15 gene_id:51363|Hs108|chr10             (561 aa)
 initn: 3869 init1: 3869 opt: 3869  Z-score: 4791.5  bits: 896.4 E(32554):    0
Smith-Waterman score: 3869; 100.0% identity (100.0% similar) in 561 aa overlap (1-561:1-561)

               10        20        30        40        50        60
pF1KA0 MRHCINCCIQLLPDGAHKQQVNCQGGPHHGHQACPTCKGENKILFRVDSKQMNLLAVLEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 MRHCINCCIQLLPDGAHKQQVNCQGGPHHGHQACPTCKGENKILFRVDSKQMNLLAVLEV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RTEGNENWGGFLRFKKGKRCSLVFGLIIMTLVMASYILSGAHQELLISSPFHYGGFPSNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RTEGNENWGGFLRFKKGKRCSLVFGLIIMTLVMASYILSGAHQELLISSPFHYGGFPSNP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 SLMDSENPSDTKEHHHQSSVNNISYMKDYPSIKLIINSITTRIEFTTRQLPDLEDLKKQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 SLMDSENPSDTKEHHHQSSVNNISYMKDYPSIKLIINSITTRIEFTTRQLPDLEDLKKQE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 LHMFSVIPNKFLPNSKSPCWYEEFSGQNTTDPYLTNSYVLYSKRFRSTFDALRKAFWGHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 LHMFSVIPNKFLPNSKSPCWYEEFSGQNTTDPYLTNSYVLYSKRFRSTFDALRKAFWGHL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 AHAHGKHFRLRCLPHFYIIGQPKCGTTDLYDRLRLHPEVKFSAIKEPHWWTRKRFGIVRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 AHAHGKHFRLRCLPHFYIIGQPKCGTTDLYDRLRLHPEVKFSAIKEPHWWTRKRFGIVRL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 RDGLRDRYPVEDYLDLFDLAAHQIHQGLQASSAKEQSKMNTIIIGEASASTMWDNNAWTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 RDGLRDRYPVEDYLDLFDLAAHQIHQGLQASSAKEQSKMNTIIIGEASASTMWDNNAWTF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 FYDNSTDGEPPFLTQDFIHAFQPNARLIVMLRDPVERLYSDYLYFASSNKSADDFHEKVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 FYDNSTDGEPPFLTQDFIHAFQPNARLIVMLRDPVERLYSDYLYFASSNKSADDFHEKVT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 EALQLFENCMLDYSLRACVYNNTLNNAMPVRLQVGLYAVYLLDWLSVFDKQQFLILRLED
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 EALQLFENCMLDYSLRACVYNNTLNNAMPVRLQVGLYAVYLLDWLSVFDKQQFLILRLED
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA0 HASNVKYTMHKVFQFLNLGPLSEKQEALMTKSPASNARRPEDRNLGPMWPITQKILRDFY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS76 HASNVKYTMHKVFQFLNLGPLSEKQEALMTKSPASNARRPEDRNLGPMWPITQKILRDFY
              490       500       510       520       530       540

              550       560 
pF1KA0 RPFNARLAQVLADEAFAWKTT
       :::::::::::::::::::::
CCDS76 RPFNARLAQVLADEAFAWKTT
              550       560 

>>CCDS55731.1 CHST15 gene_id:51363|Hs108|chr10            (506 aa)
 initn: 3126 init1: 3126 opt: 3126  Z-score: 3871.3  bits: 726.0 E(32554): 2.6e-209
Smith-Waterman score: 3126; 100.0% identity (100.0% similar) in 450 aa overlap (1-450:1-450)

               10        20        30        40        50        60
pF1KA0 MRHCINCCIQLLPDGAHKQQVNCQGGPHHGHQACPTCKGENKILFRVDSKQMNLLAVLEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MRHCINCCIQLLPDGAHKQQVNCQGGPHHGHQACPTCKGENKILFRVDSKQMNLLAVLEV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA0 RTEGNENWGGFLRFKKGKRCSLVFGLIIMTLVMASYILSGAHQELLISSPFHYGGFPSNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RTEGNENWGGFLRFKKGKRCSLVFGLIIMTLVMASYILSGAHQELLISSPFHYGGFPSNP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA0 SLMDSENPSDTKEHHHQSSVNNISYMKDYPSIKLIINSITTRIEFTTRQLPDLEDLKKQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SLMDSENPSDTKEHHHQSSVNNISYMKDYPSIKLIINSITTRIEFTTRQLPDLEDLKKQE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA0 LHMFSVIPNKFLPNSKSPCWYEEFSGQNTTDPYLTNSYVLYSKRFRSTFDALRKAFWGHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LHMFSVIPNKFLPNSKSPCWYEEFSGQNTTDPYLTNSYVLYSKRFRSTFDALRKAFWGHL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA0 AHAHGKHFRLRCLPHFYIIGQPKCGTTDLYDRLRLHPEVKFSAIKEPHWWTRKRFGIVRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 AHAHGKHFRLRCLPHFYIIGQPKCGTTDLYDRLRLHPEVKFSAIKEPHWWTRKRFGIVRL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA0 RDGLRDRYPVEDYLDLFDLAAHQIHQGLQASSAKEQSKMNTIIIGEASASTMWDNNAWTF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RDGLRDRYPVEDYLDLFDLAAHQIHQGLQASSAKEQSKMNTIIIGEASASTMWDNNAWTF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA0 FYDNSTDGEPPFLTQDFIHAFQPNARLIVMLRDPVERLYSDYLYFASSNKSADDFHEKVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 FYDNSTDGEPPFLTQDFIHAFQPNARLIVMLRDPVERLYSDYLYFASSNKSADDFHEKVT
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA0 EALQLFENCMLDYSLRACVYNNTLNNAMPVRLQVGLYAVYLLDWLSVFDKQQFLILRLED
       ::::::::::::::::::::::::::::::                              
CCDS55 EALQLFENCMLDYSLRACVYNNTLNNAMPVCTPPPRTPRAGPWQKELVCCYYASGIVGLR
              430       440       450       460       470       480




561 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 09:51:43 2016 done: Thu Nov  3 09:51:44 2016
 Total Scan time:  2.770 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]