Result of FASTA (omim) for
pF1KA0405
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0405, 660 aa
1>>>pF1KA0405 660 - 660 aa - 660 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.7482+/-0.00046; mu= 4.4055+/- 0.029
mean_var=215.8299+/-43.442, 0's: 0 Z-trim(117.6): 344 B-trim: 1373 in 1/54
Lambda= 0.087301
statistics sampled from 29340 (29714) to 29340 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.683), E-opt: 0.2 (0.348), width: 16
Scan time: 9.370
The best scores are: opt bits E(85289)
XP_016876624 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 4435 572.0 2.5e-162
XP_011534913 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 4435 572.0 2.5e-162
XP_016876623 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 4435 572.0 2.5e-162
NP_001333075 (OMIM: 604807) leucine-rich repeat tr ( 660) 4435 572.0 2.5e-162
XP_016876621 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 4435 572.0 2.5e-162
NP_001333074 (OMIM: 604807) leucine-rich repeat tr ( 660) 4435 572.0 2.5e-162
NP_037363 (OMIM: 604807) leucine-rich repeat trans ( 660) 4435 572.0 2.5e-162
NP_001333073 (OMIM: 604807) leucine-rich repeat tr ( 660) 4435 572.0 2.5e-162
XP_016876618 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 4435 572.0 2.5e-162
NP_001333072 (OMIM: 604807) leucine-rich repeat tr ( 660) 4435 572.0 2.5e-162
XP_016876619 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 4435 572.0 2.5e-162
XP_005267547 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 4435 572.0 2.5e-162
XP_016876620 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 4435 572.0 2.5e-162
XP_016876622 (OMIM: 604807) PREDICTED: leucine-ric ( 660) 4435 572.0 2.5e-162
XP_005273918 (OMIM: 604806) PREDICTED: leucine-ric ( 674) 1835 244.5 9.5e-64
NP_037412 (OMIM: 604806) leucine-rich repeat trans ( 674) 1835 244.5 9.5e-64
XP_011543185 (OMIM: 604806) PREDICTED: leucine-ric ( 674) 1835 244.5 9.5e-64
NP_037413 (OMIM: 604808,615271) leucine-rich repea ( 649) 1684 225.5 4.9e-58
XP_011527506 (OMIM: 604808,615271) PREDICTED: leuc ( 649) 1684 225.5 4.9e-58
NP_938205 (OMIM: 604808,615271) leucine-rich repea ( 649) 1684 225.5 4.9e-58
XP_005260739 (OMIM: 604808,615271) PREDICTED: leuc ( 649) 1684 225.5 4.9e-58
XP_011527507 (OMIM: 604808,615271) PREDICTED: leuc ( 649) 1684 225.5 4.9e-58
NP_001073982 (OMIM: 603104) carboxypeptidase N sub ( 545) 485 74.4 1.2e-12
XP_005269337 (OMIM: 603104) PREDICTED: carboxypept ( 545) 485 74.4 1.2e-12
NP_001278917 (OMIM: 603104) carboxypeptidase N sub ( 545) 485 74.4 1.2e-12
XP_011538979 (OMIM: 608661) PREDICTED: podocan iso ( 402) 427 67.0 1.5e-10
XP_005270514 (OMIM: 608661) PREDICTED: podocan iso ( 613) 427 67.1 2.1e-10
NP_001186009 (OMIM: 608661) podocan isoform 2 [Hom ( 642) 427 67.1 2.2e-10
NP_001186010 (OMIM: 608661) podocan isoform 2 [Hom ( 642) 427 67.1 2.2e-10
XP_016855783 (OMIM: 608661) PREDICTED: podocan iso ( 652) 427 67.2 2.2e-10
NP_714914 (OMIM: 608661) podocan isoform 1 [Homo s ( 661) 427 67.2 2.3e-10
NP_821079 (OMIM: 610869) leucine-rich repeat trans ( 581) 414 65.5 6.4e-10
XP_011518541 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_011518542 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_016873565 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
NP_001245348 (OMIM: 608817) leucine-rich repeat-co ( 640) 406 64.5 1.4e-09
NP_065980 (OMIM: 608817) leucine-rich repeat-conta ( 640) 406 64.5 1.4e-09
XP_016873564 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_011518544 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_016873559 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_011518546 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_011518543 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_011518545 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_016873563 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_016873568 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_011518540 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_016873567 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_016873560 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_016873566 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
XP_016873562 (OMIM: 608817) PREDICTED: leucine-ric ( 640) 406 64.5 1.4e-09
>>XP_016876624 (OMIM: 604807) PREDICTED: leucine-rich re (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
>>XP_011534913 (OMIM: 604807) PREDICTED: leucine-rich re (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
>>XP_016876623 (OMIM: 604807) PREDICTED: leucine-rich re (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
>>NP_001333075 (OMIM: 604807) leucine-rich repeat transm (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
>>XP_016876621 (OMIM: 604807) PREDICTED: leucine-rich re (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
>>NP_001333074 (OMIM: 604807) leucine-rich repeat transm (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
>>NP_037363 (OMIM: 604807) leucine-rich repeat transmemb (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
>>NP_001333073 (OMIM: 604807) leucine-rich repeat transm (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
>>XP_016876618 (OMIM: 604807) PREDICTED: leucine-rich re (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
>>NP_001333072 (OMIM: 604807) leucine-rich repeat transm (660 aa)
initn: 4435 init1: 4435 opt: 4435 Z-score: 3035.4 bits: 572.0 E(85289): 2.5e-162
Smith-Waterman score: 4435; 100.0% identity (100.0% similar) in 660 aa overlap (1-660:1-660)
10 20 30 40 50 60
pF1KA0 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLQTTKWPSHGAFFLKSWLIISLGLYSQVSKLLACPSVCRCDRNFVYCNERSLTSVPLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLSHPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYTPPTPTTSKLPTIPDWDGRERVTPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VNLEPRSTYRICLVPLDAFNYRAVEDTICSEATTHASYLNNGSNTASSHEQTTSHSMGSP
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
610 620 630 640 650 660
660 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 18:48:56 2016 done: Wed Nov 2 18:48:57 2016
Total Scan time: 9.370 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]