Result of FASTA (ccds) for
pF1KA0391
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0391, 567 aa
1>>>pF1KA0391 567 - 567 aa - 567 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2569+/-0.000968; mu= 19.0611+/- 0.058
mean_var=65.3541+/-13.254, 0's: 0 Z-trim(104.5): 17 B-trim: 0 in 0/50
Lambda= 0.158649
statistics sampled from 7935 (7942) to 7935 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.616), E-opt: 0.2 (0.244), width: 16
Scan time: 3.300
The best scores are: opt bits E(32554)
CCDS58312.1 KIAA0391 gene_id:9692|Hs108|chr14 ( 567) 3839 887.9 0
CCDS32063.1 KIAA0391 gene_id:9692|Hs108|chr14 ( 583) 2194 511.3 1.3e-144
CCDS58313.1 KIAA0391 gene_id:9692|Hs108|chr14 ( 488) 1667 390.7 2.2e-108
CCDS58314.1 KIAA0391 gene_id:9692|Hs108|chr14 ( 211) 1456 342.2 3.8e-94
>>CCDS58312.1 KIAA0391 gene_id:9692|Hs108|chr14 (567 aa)
initn: 3839 init1: 3839 opt: 3839 Z-score: 4745.0 bits: 887.9 E(32554): 0
Smith-Waterman score: 3839; 100.0% identity (100.0% similar) in 567 aa overlap (1-567:1-567)
10 20 30 40 50 60
pF1KA0 MTFYLFGIRSFPKLWKSPYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQNTKATN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MTFYLFGIRSFPKLWKSPYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQNTKATN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 LIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPTQPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPTQPLN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 SEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 YLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKKVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKKVI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 TPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYSNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYSNK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 LLDILSYLRNNQLYPGESFAHSIKTWFESGQCSGCGKTIESIQLSPEEYECLKGKIMRDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLDILSYLRNNQLYPGESFAHSIKTWFESGQCSGCGKTIESIQLSPEEYECLKGKIMRDV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 IDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 IDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAKR
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 NLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 TRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSW
490 500 510 520 530 540
550 560
pF1KA0 HIPYDEDLVERCSCEVPTKWLCLHQKT
:::::::::::::::::::::::::::
CCDS58 HIPYDEDLVERCSCEVPTKWLCLHQKT
550 560
>>CCDS32063.1 KIAA0391 gene_id:9692|Hs108|chr14 (583 aa)
initn: 2193 init1: 2193 opt: 2194 Z-score: 2710.0 bits: 511.3 E(32554): 1.3e-144
Smith-Waterman score: 3797; 97.3% identity (97.3% similar) in 583 aa overlap (1-567:1-583)
10 20 30 40 50 60
pF1KA0 MTFYLFGIRSFPKLWKSPYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQNTKATN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MTFYLFGIRSFPKLWKSPYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQNTKATN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 LIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPTQPLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 LIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPTQPLN
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 SEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVK
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 YLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKKVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 YLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKKVI
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 TPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYSNK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 TPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYSNK
250 260 270 280 290 300
310 320 330 340
pF1KA0 LLDILSYLRNNQLYPGESFAHSIKTWFES----------------GQCSGCGKTIESIQL
::::::::::::::::::::::::::::: :::::::::::::::
CCDS32 LLDILSYLRNNQLYPGESFAHSIKTWFESVPGKQWKGQFTTVRKSGQCSGCGKTIESIQL
310 320 330 340 350 360
350 360 370 380 390 400
pF1KA0 SPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 SPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKV
370 380 390 400 410 420
410 420 430 440 450 460
pF1KA0 RESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 RESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDP
430 440 450 460 470 480
470 480 490 500 510 520
pF1KA0 FLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 FLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQ
490 500 510 520 530 540
530 540 550 560
pF1KA0 RILSYDTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQKT
:::::::::::::::::::::::::::::::::::::::::::
CCDS32 RILSYDTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQKT
550 560 570 580
>>CCDS58313.1 KIAA0391 gene_id:9692|Hs108|chr14 (488 aa)
initn: 1667 init1: 1667 opt: 1667 Z-score: 2059.2 bits: 390.7 E(32554): 2.2e-108
Smith-Waterman score: 3160; 96.7% identity (96.7% similar) in 488 aa overlap (96-567:1-488)
70 80 90 100 110 120
pF1KA0 RYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPTQPLNSEEWD
::::::::::::::::::::::::::::::
CCDS58 MNSQTEDHALAPVRNTIQLPTQPLNSEEWD
10 20 30
130 140 150 160 170 180
pF1KA0 KLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVKYLYLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVKYLYLC
40 50 60 70 80 90
190 200 210 220 230 240
pF1KA0 VFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKKVITPSKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKKVITPSKK
100 110 120 130 140 150
250 260 270 280 290 300
pF1KA0 NYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYSNKLLDIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYSNKLLDIL
160 170 180 190 200 210
310 320 330 340
pF1KA0 SYLRNNQLYPGESFAHSIKTWFES----------------GQCSGCGKTIESIQLSPEEY
:::::::::::::::::::::::: ::::::::::::::::::::
CCDS58 SYLRNNQLYPGESFAHSIKTWFESVPGKQWKGQFTTVRKSGQCSGCGKTIESIQLSPEEY
220 230 240 250 260 270
350 360 370 380 390 400
pF1KA0 ECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 ECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQL
280 290 300 310 320 330
410 420 430 440 450 460
pF1KA0 LLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDPFLLYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDPFLLYA
340 350 360 370 380 390
470 480 490 500 510 520
pF1KA0 TLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 TLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSY
400 410 420 430 440 450
530 540 550 560
pF1KA0 DTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQKT
::::::::::::::::::::::::::::::::::::::
CCDS58 DTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQKT
460 470 480
>>CCDS58314.1 KIAA0391 gene_id:9692|Hs108|chr14 (211 aa)
initn: 1456 init1: 1456 opt: 1456 Z-score: 1803.7 bits: 342.2 E(32554): 3.8e-94
Smith-Waterman score: 1456; 100.0% identity (100.0% similar) in 211 aa overlap (357-567:1-211)
330 340 350 360 370 380
pF1KA0 FESGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRP
::::::::::::::::::::::::::::::
CCDS58 MRDVIDGGDQYRKTTPQELKRFENFIKSRP
10 20 30
390 400 410 420 430 440
pF1KA0 PFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEE
40 50 60 70 80 90
450 460 470 480 490 500
pF1KA0 VQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQ
100 110 120 130 140 150
510 520 530 540 550 560
pF1KA0 GHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQK
160 170 180 190 200 210
pF1KA0 T
:
CCDS58 T
567 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 09:33:20 2016 done: Thu Nov 3 09:33:21 2016
Total Scan time: 3.300 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]