Result of FASTA (ccds) for
pF1KA0321
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0321, 2539 aa
1>>>pF1KA0321 2539 - 2539 aa - 2539 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.4710+/-0.000997; mu= 16.8299+/- 0.060
mean_var=137.1233+/-27.268, 0's: 0 Z-trim(108.6): 52 B-trim: 0 in 0/53
Lambda= 0.109526
statistics sampled from 10254 (10304) to 10254 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.658), E-opt: 0.2 (0.317), width: 16
Scan time: 7.740
The best scores are: opt bits E(32554)
CCDS9788.1 ZFYVE26 gene_id:23503|Hs108|chr14 (2539) 17027 2703.7 0
>>CCDS9788.1 ZFYVE26 gene_id:23503|Hs108|chr14 (2539 aa)
initn: 17027 init1: 17027 opt: 17027 Z-score: 14535.2 bits: 2703.7 E(32554): 0
Smith-Waterman score: 17027; 99.9% identity (100.0% similar) in 2539 aa overlap (1-2539:1-2539)
10 20 30 40 50 60
pF1KA0 MNHPFGKEEAASQKQLFGFFCECLRRGEWELAQACVPQLQEGQGDIPKRVEDILQALVVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 MNHPFGKEEAASQKQLFGFFCECLRRGEWELAQACVPQLQEGQGDIPKRVEDILQALVVC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 PNLLRCGQDINPQRVAWVWLLVLEKWLAREKKLLPVVFRRKLEFLLLSEDLQGDIPENIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 PNLLRCGQDINPQRVAWVWLLVLEKWLAREKKLLPVVFRRKLEFLLLSEDLQGDIPENIL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 EELYETLTQGAVGHVPDGNPRRESWTPRLSSEAVSVLWDLLRQSPQPAQALLELLLEEDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 EELYETLTQGAVGHVPDGNPRRESWTPRLSSEAVSVLWDLLRQSPQPAQALLELLLEEDD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GTGLCHWPLQNALVDLIRKALRALQGPDSVPPGVVDAIYGALRTLRCPAEPLGVELHLLC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GTGLCHWPLQNALVDLIRKALRALQGPDSVPPGVVDAIYGALRTLRCPAEPLGVELHLLC
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 EELLEACRTEGSPLREERLLSCLLHKASRGLLSLYGHTYAEKVTEKPPRATASGKVSPDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 EELLEACRTEGSPLREERLLSCLLHKASRGLLSLYGHTYAEKVTEKPPRATASGKVSPDH
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 LDPERAMLALFSNPNPAEAWKVAYFYCLSNNKHFLEQILVTALTLLKEEDFPNLGCLLDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LDPERAMLALFSNPNPAEAWKVAYFYCLSNNKHFLEQILVTALTLLKEEDFPNLGCLLDR
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 EFRPLSCLLVLLGWTHCQSLESAKRLLQTLHRTQGPGCDELLRDACDGLWAHLEVLEWCI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 EFRPLSCLLVLLGWTHCQSLESAKRLLQTLHRTQGPGCDELLRDACDGLWAHLEVLEWCI
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 QQSSNPIPKRDLLYHLHGGDSHSVLYTLHHLTNLPALREEDVLKLLQKVPAKDPQQEPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 QQSSNPIPKRDLLYHLHGGDSHSVLYTLHHLTNLPALREEDVLKLLQKVPAKDPQQEPDA
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 VDAPVPEHLSQCQNLTLYQGFCAMKYAIYALCVNSHQHSQCQDCKDSLSEDLASATEPAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 VDAPVPEHLSQCQNLTLYQGFCAMKYAIYALCVNSHQHSQCQDCKDSLSEDLASATEPAN
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 DSLSSPGAANLFSTYPARCQQYLCSIPDSLCLELLENIFSLLLITSADLHPEPHLPEDYA
::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
CCDS97 DSLSSPGAANLFSTYLARCQQYLCSIPDSLCLELLENIFSLLLITSADLHPEPHLPEDYA
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 EDDDIEGKSPSGLRSPSESPQHIAHPERKSERGSLGVPKTLAYTMPSHVKAEPKDSYPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 EDDDIEGKSPSGLRSPSESPQHIAHPERKSERGSLGVPKTLAYTMPSHVKAEPKDSYPGP
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 HRHSFLDLKHFTSGISGFLADEFAIGAFLRLLQEQLDEISSRSPPEKPKQESQSCSGSRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 HRHSFLDLKHFTSGISGFLADEFAIGAFLRLLQEQLDEISSRSPPEKPKQESQSCSGSRD
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 GLQSRLHRLSKVVSEAQWRHKVVTSNHRSEEQPSRRYQPATRHPSLRRGRRTRRSQADGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GLQSRLHRLSKVVSEAQWRHKVVTSNHRSEEQPSRRYQPATRHPSLRRGRRTRRSQADGR
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 DRGSNPSLESTSSELSTSTSEGSLSAMSGRNELHSRLHPHPQSSLIPMMFSPPESLLASC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 DRGSNPSLESTSSELSTSTSEGSLSAMSGRNELHSRLHPHPQSSLIPMMFSPPESLLASC
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 ILRGNFAEAHQVLFTFNLKSSPSSGELMFMERYQEVIQELAQVEHKIENQNSDAGSSTIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ILRGNFAEAHQVLFTFNLKSSPSSGELMFMERYQEVIQELAQVEHKIENQNSDAGSSTIR
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 RTGSGRSTLQAIGSAAAAGMVFYSISDVTDKLLNTSGDPIPMLQEDFWISTALVEPTAPL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 RTGSGRSTLQAIGSAAAAGMVFYSISDVTDKLLNTSGDPIPMLQEDFWISTALVEPTAPL
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 REVLEDLSPPAMAAFDLACSQCQLWKTCKQLLETAERRLNSSLERRGRRIDHVLLNADGI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 REVLEDLSPPAMAAFDLACSQCQLWKTCKQLLETAERRLNSSLERRGRRIDHVLLNADGI
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 RGFPVVLQQISKSLNYLLMTASQTKSESVEEKGGGPPRCSITELLQMCWPSLSEDCVASH
:::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
CCDS97 RGFPVVLQQISKSLNYLLMSASQTKSESVEEKGGGPPRCSITELLQMCWPSLSEDCVASH
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 TTLSQQLDQVLQSLREALELPEPRTPPLSSLVEQAAQKAPEAEAHPVQIQTQLLQKNLGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 TTLSQQLDQVLQSLREALELPEPRTPPLSSLVEQAAQKAPEAEAHPVQIQTQLLQKNLGK
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 QTPSGSRQMDYLGTFFSYCSTLAAVLLQSLSSEPDHVEVKVGNPFVLLQQSSSQLVSHLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 QTPSGSRQMDYLGTFFSYCSTLAAVLLQSLSSEPDHVEVKVGNPFVLLQQSSSQLVSHLL
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 FERQVPPERLAALLAQENLSLSVPQVIVSCCCEPLALCSSRQSQQTSSLLTRLGTLAQLH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 FERQVPPERLAALLAQENLSLSVPQVIVSCCCEPLALCSSRQSQQTSSLLTRLGTLAQLH
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 ASHCLDDLPLSTPSSPRTTENPTLERKPYSSPRDSSLPALTSSALAFLKSRSKLLATVAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ASHCLDDLPLSTPSSPRTTENPTLERKPYSSPRDSSLPALTSSALAFLKSRSKLLATVAC
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 LGASPRLKVSKPSLSWKELRGRREVPLAAEQVARECERLLEQFPLFEAFLLAAWEPLRGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LGASPRLKVSKPSLSWKELRGRREVPLAAEQVARECERLLEQFPLFEAFLLAAWEPLRGS
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 LQQGQSLAVNLCGWASLSTVLLGLHSPIALDVLSEAFEESLVARDWSRALQLTEVYGRDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LQQGQSLAVNLCGWASLSTVLLGLHSPIALDVLSEAFEESLVARDWSRALQLTEVYGRDV
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 DDLSSIKDAVLSCAVACDKEGWQYLFPVKDASLRSRLALQFVDRWPLESCLEILAYCISD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 DDLSSIKDAVLSCAVACDKEGWQYLFPVKDASLRSRLALQFVDRWPLESCLEILAYCISD
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 TAVQEGLKCELQRKLAELQVYQKILGLQSPPVWCDWQTLRSCCVEDPSTVMNMILEAQEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 TAVQEGLKCELQRKLAELQVYQKILGLQSPPVWCDWQTLRSCCVEDPSTVMNMILEAQEY
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KA0 ELCEEWGCLYPIPREHLISLHQKHLLHLLERRDHDKALQLLRRIPDPTMCLEVTEQSLDQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ELCEEWGCLYPIPREHLISLHQKHLLHLLERRDHDKALQLLRRIPDPTMCLEVTEQSLDQ
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KA0 HTSLATSHFLANYLTTHFYGQLTAVRHREIQALYVGSKILLTLPEQHRASYSHLSSNPLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 HTSLATSHFLANYLTTHFYGQLTAVRHREIQALYVGSKILLTLPEQHRASYSHLSSNPLF
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KA0 MLEQLLMNMKVDWATVAVQTLQQLLVGQEIGFTMDEVDSLLSRYAEKALDFPYPQREKRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 MLEQLLMNMKVDWATVAVQTLQQLLVGQEIGFTMDEVDSLLSRYAEKALDFPYPQREKRS
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KA0 DSVIHLQEIVHQAADPETLPRSPSAEFSPAAPPGISSIHSPSLRERSFPPTQPSQEFVPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 DSVIHLQEIVHQAADPETLPRSPSAEFSPAAPPGISSIHSPSLRERSFPPTQPSQEFVPP
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KA0 ATPPARHQWVPDETESICMVCCREHFTMFNRRHHCRRCGRLVCSSCSTKKMVVEGCRENP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ATPPARHQWVPDETESICMVCCREHFTMFNRRHHCRRCGRLVCSSCSTKKMVVEGCRENP
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KA0 ARVCDQCYSYCNKDVPEEPSEKPEALDSSKSESPPYSFVVRVPKADEVEWILDLKEEENE
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
CCDS97 ARVCDQCYSYCNKDVPEEPSEKPEALDSSKNESPPYSFVVRVPKADEVEWILDLKEEENE
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KA0 LVRSEFYYEQAPSASLCIAILNLHRDSIACGHQLIEHCCRLSKGLTNPEVDAGLLTDIMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 LVRSEFYYEQAPSASLCIAILNLHRDSIACGHQLIEHCCRLSKGLTNPEVDAGLLTDIMK
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KA0 QLLFSAKMMFVKAGQSQDLALCDSYISKVDVLNILVAAAYRHVPSLDQILQPAAVTRLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 QLLFSAKMMFVKAGQSQDLALCDSYISKVDVLNILVAAAYRHVPSLDQILQPAAVTRLRN
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090 2100
pF1KA0 QLLEAEYYQLGVEVSTKTGLDTTGAWHAWGMACLKAGNLTAAREKFSRCLKPPFDLNQLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 QLLEAEYYQLGVEVSTKTGLDTTGAWHAWGMACLKAGNLTAAREKFSRCLKPPFDLNQLN
2050 2060 2070 2080 2090 2100
2110 2120 2130 2140 2150 2160
pF1KA0 HGSRLVQDVVEYLESTVRPFVSLQDDDYFATLRELEATLRTQSLSLAVIPEGKIMNNTYY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 HGSRLVQDVVEYLESTVRPFVSLQDDDYFATLRELEATLRTQSLSLAVIPEGKIMNNTYY
2110 2120 2130 2140 2150 2160
2170 2180 2190 2200 2210 2220
pF1KA0 QECLFYLHNYSTNLAIISFYVRHSCLREALLHLLNKESPPEVFIEGIFQPSYKSGKLHTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 QECLFYLHNYSTNLAIISFYVRHSCLREALLHLLNKESPPEVFIEGIFQPSYKSGKLHTL
2170 2180 2190 2200 2210 2220
2230 2240 2250 2260 2270 2280
pF1KA0 ENLLESIDPTLESWGKYLIAACQHLQKKNYYHILYELQQFMKDQVRAAMTCIRFFSHKAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 ENLLESIDPTLESWGKYLIAACQHLQKKNYYHILYELQQFMKDQVRAAMTCIRFFSHKAK
2230 2240 2250 2260 2270 2280
2290 2300 2310 2320 2330 2340
pF1KA0 SYTELGEKLSWLLKAKDHLKIYLQETSRSSGRKKTTFFRKKMTAADVSRHMNTLQLQMEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 SYTELGEKLSWLLKAKDHLKIYLQETSRSSGRKKTTFFRKKMTAADVSRHMNTLQLQMEV
2290 2300 2310 2320 2330 2340
2350 2360 2370 2380 2390 2400
pF1KA0 TRFLHRCESAGTSQITTLPLPTLFGNNHMKMDVACKVMLGGKNVEDGFGIAFRVLQDFQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 TRFLHRCESAGTSQITTLPLPTLFGNNHMKMDVACKVMLGGKNVEDGFGIAFRVLQDFQL
2350 2360 2370 2380 2390 2400
2410 2420 2430 2440 2450 2460
pF1KA0 DAAMTYCRAARQLVEKEKYSEIQQLLKCVSESGMAAKSDGDTILLNCLEAFKRIPPQELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 DAAMTYCRAARQLVEKEKYSEIQQLLKCVSESGMAAKSDGDTILLNCLEAFKRIPPQELE
2410 2420 2430 2440 2450 2460
2470 2480 2490 2500 2510 2520
pF1KA0 GLIQAIHNDDNKVRAYLICCKLRSAYLIAVKQEHSRATALVQQVQQAAKSSGDAVVQDIC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS97 GLIQAIHNDDNKVRAYLICCKLRSAYLIAVKQEHSRATALVQQVQQAAKSSGDAVVQDIC
2470 2480 2490 2500 2510 2520
2530
pF1KA0 AQWLLTSHPRGAHGPGSRK
:::::::::::::::::::
CCDS97 AQWLLTSHPRGAHGPGSRK
2530
2539 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 18:34:24 2016 done: Wed Nov 2 18:34:26 2016
Total Scan time: 7.740 Total Display time: 0.330
Function used was FASTA [36.3.4 Apr, 2011]