Result of FASTA (omim) for
pF1KA0228
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0228, 585 aa
1>>>pF1KA0228 585 - 585 aa - 585 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.7814+/-0.000545; mu= 16.4698+/- 0.034
mean_var=76.2345+/-14.963, 0's: 0 Z-trim(107.0): 101 B-trim: 112 in 1/50
Lambda= 0.146892
statistics sampled from 15079 (15106) to 15079 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.522), E-opt: 0.2 (0.177), width: 16
Scan time: 10.030
The best scores are: opt bits E(85289)
NP_006371 (OMIM: 605324) amyloid protein-binding p ( 585) 3863 829.1 0
NP_001269405 (OMIM: 605324) amyloid protein-bindin ( 514) 3372 725.0 1.5e-208
XP_011522500 (OMIM: 605324) PREDICTED: amyloid pro ( 499) 3287 707.0 3.8e-203
XP_011522501 (OMIM: 605324) PREDICTED: amyloid pro ( 393) 2558 552.4 9.9e-157
NP_803136 (OMIM: 601334) kinesin light chain 3 [Ho ( 504) 188 50.2 1.9e-05
XP_016873622 (OMIM: 609541,611729) PREDICTED: kine ( 425) 161 44.5 0.00087
NP_001128246 (OMIM: 609541,611729) kinesin light c ( 545) 161 44.5 0.0011
XP_005274241 (OMIM: 609541,611729) PREDICTED: kine ( 600) 161 44.5 0.0012
NP_073733 (OMIM: 609541,611729) kinesin light chai ( 622) 161 44.6 0.0012
XP_005274240 (OMIM: 609541,611729) PREDICTED: kine ( 622) 161 44.6 0.0012
NP_001305663 (OMIM: 609541,611729) kinesin light c ( 622) 161 44.6 0.0012
NP_001128248 (OMIM: 609541,611729) kinesin light c ( 622) 161 44.6 0.0012
NP_001128247 (OMIM: 609541,611729) kinesin light c ( 622) 161 44.6 0.0012
NP_694972 (OMIM: 208540,267010,604387,608002) neph (1330) 164 45.4 0.0015
NP_005543 (OMIM: 600025) kinesin light chain 1 iso ( 560) 151 42.4 0.0048
NP_891553 (OMIM: 600025) kinesin light chain 1 iso ( 573) 151 42.4 0.0049
NP_001123579 (OMIM: 600025) kinesin light chain 1 ( 618) 151 42.4 0.0052
>>NP_006371 (OMIM: 605324) amyloid protein-binding prote (585 aa)
initn: 3863 init1: 3863 opt: 3863 Z-score: 4426.8 bits: 829.1 E(85289): 0
Smith-Waterman score: 3863; 100.0% identity (100.0% similar) in 585 aa overlap (1-585:1-585)
10 20 30 40 50 60
pF1KA0 MAAVELEWIPETLYNTAISAVVDNYIRSRRDIRSLPENIQFDVYYKLYQQGRLCQLGSEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 MAAVELEWIPETLYNTAISAVVDNYIRSRRDIRSLPENIQFDVYYKLYQQGRLCQLGSEF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 CELEVFAKVLRALDKRHLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAAVKEKAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 CELEVFAKVLRALDKRHLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAAVKEKAI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 QVGFVLGGFLSDAGWYSDAEKVFLSCLQLCTLHDEMLHWFRAVECCVRLLHVRNGNCKYH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 QVGFVLGGFLSDAGWYSDAEKVFLSCLQLCTLHDEMLHWFRAVECCVRLLHVRNGNCKYH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 LGEETFKLAQTYMDKLSKHGQQANKAALYGELCALLFAKSHYDEAYKWCIEAMKEITAGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 LGEETFKLAQTYMDKLSKHGQQANKAALYGELCALLFAKSHYDEAYKWCIEAMKEITAGL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 PVKVVVDVLRQASKACVVKREFKKAEQLIKHAVYLARDHFGSKHPKYSDTLLDYGFYLLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 PVKVVVDVLRQASKACVVKREFKKAEQLIKHAVYLARDHFGSKHPKYSDTLLDYGFYLLN
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 VDNICQSVAIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFDNALFHAERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 VDNICQSVAIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFDNALFHAERA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 IGIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 IGIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 FGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 FGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 YNYDMNQYENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFEYHNVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_006 YNYDMNQYENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFEYHNVL
490 500 510 520 530 540
550 560 570 580
pF1KA0 SNWNRLRDRQYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
:::::::::::::::::::::::::::::::::::::::::::::
NP_006 SNWNRLRDRQYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
550 560 570 580
>>NP_001269405 (OMIM: 605324) amyloid protein-binding pr (514 aa)
initn: 3372 init1: 3372 opt: 3372 Z-score: 3865.3 bits: 725.0 E(85289): 1.5e-208
Smith-Waterman score: 3372; 100.0% identity (100.0% similar) in 510 aa overlap (76-585:5-514)
50 60 70 80 90 100
pF1KA0 KLYQQGRLCQLGSEFCELEVFAKVLRALDKRHLLHHCFQALMDHGVKVASVLAYSFSRRC
::::::::::::::::::::::::::::::
NP_001 MFTTRHLLHHCFQALMDHGVKVASVLAYSFSRRC
10 20 30
110 120 130 140 150 160
pF1KA0 SYIAESDAAVKEKAIQVGFVLGGFLSDAGWYSDAEKVFLSCLQLCTLHDEMLHWFRAVEC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SYIAESDAAVKEKAIQVGFVLGGFLSDAGWYSDAEKVFLSCLQLCTLHDEMLHWFRAVEC
40 50 60 70 80 90
170 180 190 200 210 220
pF1KA0 CVRLLHVRNGNCKYHLGEETFKLAQTYMDKLSKHGQQANKAALYGELCALLFAKSHYDEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CVRLLHVRNGNCKYHLGEETFKLAQTYMDKLSKHGQQANKAALYGELCALLFAKSHYDEA
100 110 120 130 140 150
230 240 250 260 270 280
pF1KA0 YKWCIEAMKEITAGLPVKVVVDVLRQASKACVVKREFKKAEQLIKHAVYLARDHFGSKHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YKWCIEAMKEITAGLPVKVVVDVLRQASKACVVKREFKKAEQLIKHAVYLARDHFGSKHP
160 170 180 190 200 210
290 300 310 320 330 340
pF1KA0 KYSDTLLDYGFYLLNVDNICQSVAIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KYSDTLLDYGFYLLNVDNICQSVAIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQY
220 230 240 250 260 270
350 360 370 380 390 400
pF1KA0 SSGKFDNALFHAERAIGIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSGKFDNALFHAERAIGIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQE
280 290 300 310 320 330
410 420 430 440 450 460
pF1KA0 AHDLHLSSLQLAKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHDLHLSSLQLAKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQ
340 350 360 370 380 390
470 480 490 500 510 520
pF1KA0 EDYEVALSVGHLASLYNYDMNQYENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDYEVALSVGHLASLYNYDMNQYENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYN
400 410 420 430 440 450
530 540 550 560 570 580
pF1KA0 SIGNYEKVFEYHNVLSNWNRLRDRQYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SIGNYEKVFEYHNVLSNWNRLRDRQYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
460 470 480 490 500 510
>>XP_011522500 (OMIM: 605324) PREDICTED: amyloid protein (499 aa)
initn: 3287 init1: 3287 opt: 3287 Z-score: 3768.1 bits: 707.0 E(85289): 3.8e-203
Smith-Waterman score: 3287; 100.0% identity (100.0% similar) in 499 aa overlap (87-585:1-499)
60 70 80 90 100 110
pF1KA0 GSEFCELEVFAKVLRALDKRHLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAAVK
::::::::::::::::::::::::::::::
XP_011 MDHGVKVASVLAYSFSRRCSYIAESDAAVK
10 20 30
120 130 140 150 160 170
pF1KA0 EKAIQVGFVLGGFLSDAGWYSDAEKVFLSCLQLCTLHDEMLHWFRAVECCVRLLHVRNGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKAIQVGFVLGGFLSDAGWYSDAEKVFLSCLQLCTLHDEMLHWFRAVECCVRLLHVRNGN
40 50 60 70 80 90
180 190 200 210 220 230
pF1KA0 CKYHLGEETFKLAQTYMDKLSKHGQQANKAALYGELCALLFAKSHYDEAYKWCIEAMKEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CKYHLGEETFKLAQTYMDKLSKHGQQANKAALYGELCALLFAKSHYDEAYKWCIEAMKEI
100 110 120 130 140 150
240 250 260 270 280 290
pF1KA0 TAGLPVKVVVDVLRQASKACVVKREFKKAEQLIKHAVYLARDHFGSKHPKYSDTLLDYGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TAGLPVKVVVDVLRQASKACVVKREFKKAEQLIKHAVYLARDHFGSKHPKYSDTLLDYGF
160 170 180 190 200 210
300 310 320 330 340 350
pF1KA0 YLLNVDNICQSVAIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFDNALFH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YLLNVDNICQSVAIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFDNALFH
220 230 240 250 260 270
360 370 380 390 400 410
pF1KA0 AERAIGIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AERAIGIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQL
280 290 300 310 320 330
420 430 440 450 460 470
pF1KA0 AKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGH
340 350 360 370 380 390
480 490 500 510 520 530
pF1KA0 LASLYNYDMNQYENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LASLYNYDMNQYENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFEY
400 410 420 430 440 450
540 550 560 570 580
pF1KA0 HNVLSNWNRLRDRQYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HNVLSNWNRLRDRQYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
460 470 480 490
>>XP_011522501 (OMIM: 605324) PREDICTED: amyloid protein (393 aa)
initn: 2558 init1: 2558 opt: 2558 Z-score: 2934.8 bits: 552.4 E(85289): 9.9e-157
Smith-Waterman score: 2558; 100.0% identity (100.0% similar) in 393 aa overlap (193-585:1-393)
170 180 190 200 210 220
pF1KA0 VECCVRLLHVRNGNCKYHLGEETFKLAQTYMDKLSKHGQQANKAALYGELCALLFAKSHY
::::::::::::::::::::::::::::::
XP_011 MDKLSKHGQQANKAALYGELCALLFAKSHY
10 20 30
230 240 250 260 270 280
pF1KA0 DEAYKWCIEAMKEITAGLPVKVVVDVLRQASKACVVKREFKKAEQLIKHAVYLARDHFGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEAYKWCIEAMKEITAGLPVKVVVDVLRQASKACVVKREFKKAEQLIKHAVYLARDHFGS
40 50 60 70 80 90
290 300 310 320 330 340
pF1KA0 KHPKYSDTLLDYGFYLLNVDNICQSVAIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KHPKYSDTLLDYGFYLLNVDNICQSVAIYQAALDIRQSVFGGKNIHVATAHEDLAYSSYV
100 110 120 130 140 150
350 360 370 380 390 400
pF1KA0 HQYSSGKFDNALFHAERAIGIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEQRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HQYSSGKFDNALFHAERAIGIITHILPEDHLLLASSKRVKALILEEIAIDCHNKETEQRL
160 170 180 190 200 210
410 420 430 440 450 460
pF1KA0 LQEAHDLHLSSLQLAKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQEAHDLHLSSLQLAKKAFGEFNVQTAKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQL
220 230 240 250 260 270
470 480 490 500 510 520
pF1KA0 LGQEDYEVALSVGHLASLYNYDMNQYENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGQEDYEVALSVGHLASLYNYDMNQYENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIK
280 290 300 310 320 330
530 540 550 560 570 580
pF1KA0 LYNSIGNYEKVFEYHNVLSNWNRLRDRQYSVTDALEDVSTSPQSTEEVVQSFLISQNVEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LYNSIGNYEKVFEYHNVLSNWNRLRDRQYSVTDALEDVSTSPQSTEEVVQSFLISQNVEG
340 350 360 370 380 390
pF1KA0 PSC
:::
XP_011 PSC
>>NP_803136 (OMIM: 601334) kinesin light chain 3 [Homo s (504 aa)
initn: 339 init1: 135 opt: 188 Z-score: 218.7 bits: 50.2 E(85289): 1.9e-05
Smith-Waterman score: 188; 27.3% identity (65.7% similar) in 143 aa overlap (399-540:261-402)
370 380 390 400 410 420
pF1KA0 PEDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQT
.: .:: :: ..::. ....: . .
NP_803 RQALEDLERSSGHCHPDVATMLNILALVYRDQNKYKEATDLLHDALQIREQTLGPEHPAV
240 250 260 270 280 290
430 440 450 460 470 480
pF1KA0 AKHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQY
: .::. :: . ...::: . .:..:.:..:: . .:: ....:: : .....
NP_803 AATLNNLAVLYGKRGRYREAEPLCQRALEIREKVLGADHPDVAKQLNNLA-LLCQNQGKF
300 310 320 330 340
490 500 510 520 530 540
pF1KA0 ENAEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFE-YHNVLSNWNRLR
:..:. : :...: . : : .. .: . : . ..:... : :...:
NP_803 EDVERHYARALSIYEALGGPHDPNVAKTKNNLASAYLKQNKYQQAEELYKEILHKEDLPA
350 360 370 380 390 400
550 560 570 580
pF1KA0 DRQYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
NP_803 PLGAPNTGTAGDAEQALRRSSSLSKIRESIRRGSEKLVSRLRGEAAAGAAGMKRAMSLNT
410 420 430 440 450 460
>>XP_016873622 (OMIM: 609541,611729) PREDICTED: kinesin (425 aa)
initn: 137 init1: 137 opt: 161 Z-score: 189.0 bits: 44.5 E(85289): 0.00087
Smith-Waterman score: 181; 28.4% identity (63.9% similar) in 169 aa overlap (340-507:49-205)
310 320 330 340 350 360
pF1KA0 IYQAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSSGKFDNALFHAERAIGIITHILP
: .: ...:. .: . :..: . :
XP_016 APQPIVRKLPTALGAWRAGAEQVSPHSGSHSVIHTQDQNKYKEAAHLLNDALAIREKTLG
20 30 40 50 60 70
370 380 390 400 410 420
pF1KA0 EDHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQTA
.:: .:.. :...:. ..:. . . ::. : .:.. .:..:.:. ..:
XP_016 KDHPAVAAT-------LNNLAV-LYGKRGKYK---EAEPLCKRALEIREKVLGKFHPDVA
80 90 100 110 120
430 440 450 460 470 480
pF1KA0 KHYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQYE
:. .::. : :.. : .:.: .. .:..: :: .: .:: . ..::: : ...:.
XP_016 KQLSNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCY-LKQGKYQ
130 140 150 160 170 180
490 500 510 520 530 540
pF1KA0 NAEKLYLRSIA-IGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFEYHNVLSNWNRLRD
.:: :: . .. .: ::
XP_016 DAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKV
190 200 210 220 230 240
>>NP_001128246 (OMIM: 609541,611729) kinesin light chain (545 aa)
initn: 178 init1: 137 opt: 161 Z-score: 187.3 bits: 44.5 E(85289): 0.0011
Smith-Waterman score: 176; 26.2% identity (58.9% similar) in 202 aa overlap (342-541:128-317)
320 330 340 350 360 370
pF1KA0 QAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSS-GKFDNALFHAERAIGIITHILPE
: ::.: :... :. ..:. . . .
NP_001 SPAPSPGGGDVSGQHGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGH
100 110 120 130 140 150
380 390 400 410 420 430
pF1KA0 DHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQTAK
:: .:. . ::. .. .:: : :: :. ..: . .:..:. . .:
NP_001 DHPDVATMLNILALVYRD-----QNKYKE-----AAHLLN-DALAIREKTLGKDHPAVAA
160 170 180 190 200
440 450 460 470 480 490
pF1KA0 HYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQYEN
.::. :: . :.:::: . .:..:.:..::. .:: ....:: : .... :.
NP_001 TLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLA-LLCQNQGKAEE
210 220 230 240 250 260
500 510 520 530 540
pF1KA0 AEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFE-YHNVLSNWNRLRDR
.: : :.. : .: .. .: . : . :.:. . :...:.
NP_001 VEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFG
270 280 290 300 310 320
550 560 570 580
pF1KA0 QYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
NP_001 SVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQ
330 340 350 360 370 380
>>XP_005274241 (OMIM: 609541,611729) PREDICTED: kinesin (600 aa)
initn: 178 init1: 137 opt: 161 Z-score: 186.7 bits: 44.5 E(85289): 0.0012
Smith-Waterman score: 176; 26.2% identity (58.9% similar) in 202 aa overlap (342-541:205-394)
320 330 340 350 360 370
pF1KA0 QAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSS-GKFDNALFHAERAIGIITHILPE
: ::.: :... :. ..:. . . .
XP_005 SPAPSPGGGDVSGQHGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGH
180 190 200 210 220 230
380 390 400 410 420 430
pF1KA0 DHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQTAK
:: .:. . ::. .. .:: : :: :. ..: . .:..:. . .:
XP_005 DHPDVATMLNILALVYRD-----QNKYKE-----AAHLLN-DALAIREKTLGKDHPAVAA
240 250 260 270 280
440 450 460 470 480 490
pF1KA0 HYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQYEN
.::. :: . :.:::: . .:..:.:..::. .:: ....:: : .... :.
XP_005 TLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLA-LLCQNQGKAEE
290 300 310 320 330 340
500 510 520 530 540
pF1KA0 AEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFE-YHNVLSNWNRLRDR
.: : :.. : .: .. .: . : . :.:. . :...:.
XP_005 VEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFG
350 360 370 380 390 400
550 560 570 580
pF1KA0 QYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
XP_005 SVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQ
410 420 430 440 450 460
>>NP_073733 (OMIM: 609541,611729) kinesin light chain 2 (622 aa)
initn: 178 init1: 137 opt: 161 Z-score: 186.4 bits: 44.6 E(85289): 0.0012
Smith-Waterman score: 176; 26.2% identity (58.9% similar) in 202 aa overlap (342-541:205-394)
320 330 340 350 360 370
pF1KA0 QAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSS-GKFDNALFHAERAIGIITHILPE
: ::.: :... :. ..:. . . .
NP_073 SPAPSPGGGDVSGQHGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGH
180 190 200 210 220 230
380 390 400 410 420 430
pF1KA0 DHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQTAK
:: .:. . ::. .. .:: : :: :. ..: . .:..:. . .:
NP_073 DHPDVATMLNILALVYRD-----QNKYKE-----AAHLLN-DALAIREKTLGKDHPAVAA
240 250 260 270 280
440 450 460 470 480 490
pF1KA0 HYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQYEN
.::. :: . :.:::: . .:..:.:..::. .:: ....:: : .... :.
NP_073 TLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLA-LLCQNQGKAEE
290 300 310 320 330 340
500 510 520 530 540
pF1KA0 AEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFE-YHNVLSNWNRLRDR
.: : :.. : .: .. .: . : . :.:. . :...:.
NP_073 VEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFG
350 360 370 380 390 400
550 560 570 580
pF1KA0 QYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
NP_073 SVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQ
410 420 430 440 450 460
>>XP_005274240 (OMIM: 609541,611729) PREDICTED: kinesin (622 aa)
initn: 178 init1: 137 opt: 161 Z-score: 186.4 bits: 44.6 E(85289): 0.0012
Smith-Waterman score: 176; 26.2% identity (58.9% similar) in 202 aa overlap (342-541:205-394)
320 330 340 350 360 370
pF1KA0 QAALDIRQSVFGGKNIHVATAHEDLAYSSYVHQYSS-GKFDNALFHAERAIGIITHILPE
: ::.: :... :. ..:. . . .
XP_005 SPAPSPGGGDVSGQHGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGH
180 190 200 210 220 230
380 390 400 410 420 430
pF1KA0 DHLLLASSKRVKALILEEIAIDCHNKETEQRLLQEAHDLHLSSLQLAKKAFGEFNVQTAK
:: .:. . ::. .. .:: : :: :. ..: . .:..:. . .:
XP_005 DHPDVATMLNILALVYRD-----QNKYKE-----AAHLLN-DALAIREKTLGKDHPAVAA
240 250 260 270 280
440 450 460 470 480 490
pF1KA0 HYGNLGRLYQSMRKFKEAEEMHIKAIQIKEQLLGQEDYEVALSVGHLASLYNYDMNQYEN
.::. :: . :.:::: . .:..:.:..::. .:: ....:: : .... :.
XP_005 TLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLSNLA-LLCQNQGKAEE
290 300 310 320 330 340
500 510 520 530 540
pF1KA0 AEKLYLRSIAIGKKLFGEGYSGLEYDYRGLIKLYNSIGNYEKVFE-YHNVLSNWNRLRDR
.: : :.. : .: .. .: . : . :.:. . :...:.
XP_005 VEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFG
350 360 370 380 390 400
550 560 570 580
pF1KA0 QYSVTDALEDVSTSPQSTEEVVQSFLISQNVEGPSC
XP_005 SVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQ
410 420 430 440 450 460
585 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 21:58:21 2016 done: Sat Nov 5 21:58:22 2016
Total Scan time: 10.030 Total Display time: 0.080
Function used was FASTA [36.3.4 Apr, 2011]