Result of FASTA (ccds) for
pF1KA0203
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0203, 1591 aa
1>>>pF1KA0203 1591 - 1591 aa - 1591 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 12.0653+/-0.00169; mu= -7.1671+/- 0.099
mean_var=447.3328+/-94.895, 0's: 0 Z-trim(107.5): 192 B-trim: 0 in 0/54
Lambda= 0.060640
statistics sampled from 9496 (9633) to 9496 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.296), width: 16
Scan time: 4.990
The best scores are: opt bits E(32554)
CCDS47856.1 RB1CC1 gene_id:9821|Hs108|chr8 (1591) 10238 912.4 0
CCDS34892.1 RB1CC1 gene_id:9821|Hs108|chr8 (1594) 10222 911.0 0
>>CCDS47856.1 RB1CC1 gene_id:9821|Hs108|chr8 (1591 aa)
initn: 10238 init1: 10238 opt: 10238 Z-score: 4861.4 bits: 912.4 E(32554): 0
Smith-Waterman score: 10238; 99.9% identity (99.9% similar) in 1591 aa overlap (1-1591:1-1591)
10 20 30 40 50 60
pF1KA0 MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LALEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LALEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEDSEKAETKRSTEL
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
CCDS47 SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEDSEKAEMKRSTEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VLSPDMPRTTNESLLTSFPKSVEHVSPDTADAESGKEIRESCQSTVHQQDETTIDTKDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VLSPDMPRTTNESLLTSFPKSVEHVSPDTADAESGKEIRESCQSTVHQQDETTIDTKDGD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 LPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 AIKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQKRAENLKDASVLPDLCLSHANQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AIKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQKRAENLKDASVLPDLCLSHANQL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 MIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 ERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 LLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASVSQTSPQSASSPRMESTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASVSQTSPQSASSPRMESTA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 GITTTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 GITTTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLD
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDT
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 NVCGKEDFGDHTSLNVQLERCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NVCGKEDFGDHTSLNVQLERCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 AVEIRNIIEKVKCSLEITLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AVEIRNIIEKVKCSLEITLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELV
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 CLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHSQNCEIKELKQSREIVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 CLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHSQNCEIKELKQSREIVLE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 DLKKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHIQEFEKVMTDHRVSLEELKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DLKKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHIQEFEKVMTDHRVSLEELKKE
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 NQQIINQIQESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEVELALKEAETDEIKILLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 NQQIINQIQESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEVELALKEAETDEIKILLEE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 SRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISEL
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 ISRHEEESNILKAELNKVTSLHNQAFEIEKNLKEQIIELQSKLDSELSALERQKDEKITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ISRHEEESNILKAELNKVTSLHNQAFEIEKNLKEQIIELQSKLDSELSALERQKDEKITQ
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 QEEKYEAIIQNLEKDRQKLVSSQEQDREQLIQKLNCEKDEAIQTALKEFKLEREVVEKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QEEKYEAIIQNLEKDRQKLVSSQEQDREQLIQKLNCEKDEAIQTALKEFKLEREVVEKEL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 LEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 LEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNV
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 RTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 RTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLE
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 EKKKLEEEVSKLRSSSFVPSPYVATAPELYGACAPELPGESDRSAVETADEGRVDSAMET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 EKKKLEEEVSKLRSSSFVPSPYVATAPELYGACAPELPGESDRSAVETADEGRVDSAMET
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 SMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRD
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KA0 FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPASGASRRPWVLGKVMEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPASGASRRPWVLGKVMEKE
1510 1520 1530 1540 1550 1560
1570 1580 1590
pF1KA0 YCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
:::::::::::::::::::::::::::::::
CCDS47 YCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
1570 1580 1590
>>CCDS34892.1 RB1CC1 gene_id:9821|Hs108|chr8 (1594 aa)
initn: 9922 init1: 9922 opt: 10222 Z-score: 4853.9 bits: 911.0 E(32554): 0
Smith-Waterman score: 10222; 99.7% identity (99.7% similar) in 1594 aa overlap (1-1591:1-1594)
10 20 30 40 50 60
pF1KA0 MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LALEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LALEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEDSEKAETKRSTEL
::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
CCDS34 SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEDSEKAEMKRSTEL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VLSPDMPRTTNESLLTSFPKSVEHVSPDTADAESGKEIRESCQSTVHQQDETTIDTKDGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 VLSPDMPRTTNESLLTSFPKSVEHVSPDTADAESGKEIRESCQSTVHQQDETTIDTKDGD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 LPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 AIKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQKRAENLKDASVLPDLCLSHANQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 AIKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQKRAENLKDASVLPDLCLSHANQL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 MIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 ERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGK
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 LFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVP
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 LLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASVSQTSPQSASSPRMESTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASVSQTSPQSASSPRMESTA
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 GITTTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GITTTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLD
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDT
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 NVCGKEDFGDHTSLNVQLERCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 NVCGKEDFGDHTSLNVQLERCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCT
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 AVEIRNIIEKVKCSLEITLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 AVEIRNIIEKVKCSLEITLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELV
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 CLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHSQNCEIKELKQSREIVLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 CLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHSQNCEIKELKQSREIVLE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 DLKKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHIQEFEKVMTDHRVSLEELKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 DLKKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHIQEFEKVMTDHRVSLEELKKE
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 NQQIINQIQESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEVELALKEAETDEIKILLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 NQQIINQIQESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEVELALKEAETDEIKILLEE
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 SRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISEL
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 ISRHEEESNILKAELNKVTSLHNQAFEIEKNLKEQIIELQSKLDSELSALERQKDEKITQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 ISRHEEESNILKAELNKVTSLHNQAFEIEKNLKEQIIELQSKLDSELSALERQKDEKITQ
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 QEEKYEAIIQNLEKDRQKLVSSQEQDREQLIQKLNCEKDEAIQTALKEFKLEREVVEKEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 QEEKYEAIIQNLEKDRQKLVSSQEQDREQLIQKLNCEKDEAIQTALKEFKLEREVVEKEL
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KA0 LEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNV
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KA0 RTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLE
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KA0 EKKKLEEEVSKLRSSSFVPSPYVATAPELYGACAPELPGESDRSAVETADEGRVDSAMET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 EKKKLEEEVSKLRSSSFVPSPYVATAPELYGACAPELPGESDRSAVETADEGRVDSAMET
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KA0 SMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 SMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRD
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550
pF1KA0 FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKP---ASGASRRPWVLGKVM
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
CCDS34 FQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVM
1510 1520 1530 1540 1550 1560
1560 1570 1580 1590
pF1KA0 EKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
::::::::::::::::::::::::::::::::::
CCDS34 EKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
1570 1580 1590
1591 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 18:21:50 2016 done: Wed Nov 2 18:21:51 2016
Total Scan time: 4.990 Total Display time: 0.240
Function used was FASTA [36.3.4 Apr, 2011]