Result of FASTA (omim) for
pF1KA0187
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0187, 1282 aa
1>>>pF1KA0187 1282 - 1282 aa - 1282 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.1041+/-0.000475; mu= 10.7514+/- 0.030
mean_var=216.6524+/-42.835, 0's: 0 Z-trim(115.9): 67 B-trim: 70 in 1/54
Lambda= 0.087135
statistics sampled from 26639 (26702) to 26639 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.65), E-opt: 0.2 (0.313), width: 16
Scan time: 18.230
The best scores are: opt bits E(85289)
XP_005271903 (OMIM: 107600,611448) PREDICTED: ribo (1282) 8516 1085.1 0
XP_011538704 (OMIM: 107600,611448) PREDICTED: ribo (1282) 8516 1085.1 0
NP_055568 (OMIM: 107600,611448) ribosome biogenesi (1282) 8516 1085.1 0
XP_011538705 (OMIM: 107600,611448) PREDICTED: ribo ( 871) 5765 739.1 3.1e-212
XP_005271906 (OMIM: 107600,611448) PREDICTED: ribo ( 879) 5698 730.6 1.1e-209
XP_005271905 (OMIM: 107600,611448) PREDICTED: ribo (1219) 5695 730.4 1.8e-209
NP_060598 (OMIM: 611214) pre-rRNA-processing prote ( 804) 396 64.1 4.5e-09
>>XP_005271903 (OMIM: 107600,611448) PREDICTED: ribosome (1282 aa)
initn: 8516 init1: 8516 opt: 8516 Z-score: 5798.0 bits: 1085.1 E(85289): 0
Smith-Waterman score: 8516; 100.0% identity (100.0% similar) in 1282 aa overlap (1-1282:1-1282)
10 20 30 40 50 60
pF1KA0 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 DEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 FDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 DHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 IKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 AFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 VRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIR
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 EPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFR
1210 1220 1230 1240 1250 1260
1270 1280
pF1KA0 IQGQKERRNQKSSLKGAEGQLQ
::::::::::::::::::::::
XP_005 IQGQKERRNQKSSLKGAEGQLQ
1270 1280
>>XP_011538704 (OMIM: 107600,611448) PREDICTED: ribosome (1282 aa)
initn: 8516 init1: 8516 opt: 8516 Z-score: 5798.0 bits: 1085.1 E(85289): 0
Smith-Waterman score: 8516; 100.0% identity (100.0% similar) in 1282 aa overlap (1-1282:1-1282)
10 20 30 40 50 60
pF1KA0 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 DEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 FDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 DHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 IKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 AFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 VRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIR
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 EPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFR
1210 1220 1230 1240 1250 1260
1270 1280
pF1KA0 IQGQKERRNQKSSLKGAEGQLQ
::::::::::::::::::::::
XP_011 IQGQKERRNQKSSLKGAEGQLQ
1270 1280
>>NP_055568 (OMIM: 107600,611448) ribosome biogenesis pr (1282 aa)
initn: 8516 init1: 8516 opt: 8516 Z-score: 5798.0 bits: 1085.1 E(85289): 0
Smith-Waterman score: 8516; 100.0% identity (100.0% similar) in 1282 aa overlap (1-1282:1-1282)
10 20 30 40 50 60
pF1KA0 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 DEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 FDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 FDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIE
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KA0 DHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKS
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KA0 IKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 IKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEG
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KA0 AFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHG
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KA0 VRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIR
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KA0 EPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 EPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFR
1210 1220 1230 1240 1250 1260
1270 1280
pF1KA0 IQGQKERRNQKSSLKGAEGQLQ
::::::::::::::::::::::
NP_055 IQGQKERRNQKSSLKGAEGQLQ
1270 1280
>>XP_011538705 (OMIM: 107600,611448) PREDICTED: ribosome (871 aa)
initn: 5765 init1: 5765 opt: 5765 Z-score: 3931.2 bits: 739.1 E(85289): 3.1e-212
Smith-Waterman score: 5765; 100.0% identity (100.0% similar) in 871 aa overlap (412-1282:1-871)
390 400 410 420 430 440
pF1KA0 TIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQMDLNTGRMRRKAIFGDEDESGD
::::::::::::::::::::::::::::::
XP_011 MMPKEEKQMDLNTGRMRRKAIFGDEDESGD
10 20 30
450 460 470 480 490 500
pF1KA0 SDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAVKGIKRRKLELEEDSEMDLPAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAVKGIKRRKLELEEDSEMDLPAF
40 50 60 70 80 90
510 520 530 540 550 560
pF1KA0 ADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGSKAAGEGSKAGLSPANCQSDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGSKAAGEGSKAGLSPANCQSDRV
100 110 120 130 140 150
570 580 590 600 610 620
pF1KA0 NLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSLSAEEEDSENEEAIRKKLSKPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSLSAEEEDSENEEAIRKKLSKPS
160 170 180 190 200 210
630 640 650 660 670 680
pF1KA0 QVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKETSGALKWKEDLSRKAAEAFLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKETSGALKWKEDLSRKAAEAFLR
220 230 240 250 260 270
690 700 710 720 730 740
pF1KA0 QQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQPDRECKHKADSLDCSRFLVEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQPDRECKHKADSLDCSRFLVEA
280 290 300 310 320 330
750 760 770 780 790 800
pF1KA0 PHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELYGDFEDLETGDVHKGKSGPNTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELYGDFEDLETGDVHKGKSGPNTQ
340 350 360 370 380 390
810 820 830 840 850 860
pF1KA0 NEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEYDEGESTYFDDLKGEMQKQAQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEYDEGESTYFDDLKGEMQKQAQL
400 410 420 430 440 450
870 880 890 900 910 920
pF1KA0 NRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQNFDPHYPIILGGLGNSEGNVGY
460 470 480 490 500 510
930 940 950 960 970 980
pF1KA0 VQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGAA
520 530 540 550 560 570
990 1000 1010 1020 1030 1040
pF1KA0 FWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKLKLTGFPYKIFKNTS
580 590 600 610 620 630
1050 1060 1070 1080 1090 1100
pF1KA0 FIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRTW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEGAFRASFEDKLLMSDIVFMRTW
640 650 660 670 680 690
1110 1120 1130 1140 1150 1160
pF1KA0 YPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGVRLKANKDSLYKPILRQKKHF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGVRLKANKDSLYKPILRQKKHF
700 710 720 730 740 750
1170 1180 1190 1200 1210 1220
pF1KA0 NSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIREPHERKILALLDALSTVHSQK
760 770 780 790 800 810
1230 1240 1250 1260 1270 1280
pF1KA0 MKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFRIQGQKERRNQKSSLKGAEGQL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFRIQGQKERRNQKSSLKGAEGQL
820 830 840 850 860 870
pF1KA0 Q
:
XP_011 Q
>>XP_005271906 (OMIM: 107600,611448) PREDICTED: ribosome (879 aa)
initn: 5804 init1: 5698 opt: 5698 Z-score: 3885.6 bits: 730.6 E(85289): 1.1e-209
Smith-Waterman score: 5698; 99.4% identity (99.8% similar) in 866 aa overlap (1-866:1-866)
10 20 30 40 50 60
pF1KA0 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 DEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQN
::::::::::::::::::::.. .:
XP_005 DEGESTYFDDLKGEMQKQAQITAYRFFYSPSCTAESRRI
850 860 870
>>XP_005271905 (OMIM: 107600,611448) PREDICTED: ribosome (1219 aa)
initn: 5695 init1: 5695 opt: 5695 Z-score: 3881.7 bits: 730.4 E(85289): 1.8e-209
Smith-Waterman score: 7939; 95.1% identity (95.1% similar) in 1282 aa overlap (1-1282:1-1219)
10 20 30 40 50 60
pF1KA0 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEAKDQKKHRKKNSGPKAAKKKKRLLQDLQLGDEEDARKRNPKAFAVQSAVRMARSFHRT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QDLKTKKHHIPVVDRTPLEPPPIVVVVMGPPKVGKSTLIQCLIRNFTRQKLTEIRGPVTI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VSGKKRRLTIIECGCDINMMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPKIM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVLTHLDSFKHNKQLKKTKKRLKHRFWTEVYPGAKLFYLSGMVHGEYQNQEIHNLGRFIT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VMKFRPLTWQTSHPYILADRMEDLTNPEDIRTNIKCDRKVSLYGYLRGAHLKNKSQIHMP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GVGDFAVSDISFLPDPCALPEQQKKRCLNEKEKLVYAPLSGVGGVLYDKDAVYVDLGGSH
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VFQDEVGPTHELVQSLISTHSTIDAKMASSRVTLFSDSKPLGSEDIDNQGLMMPKEEKQM
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DLNTGRMRRKAIFGDEDESGDSDDEEDDEMSEDDGLENGSSDEEAEEEENAEMTDQYMAV
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEEADESSEEEDCTAGEKGISGS
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KAAGEGSKAGLSPANCQSDRVNLEKSLLMKKAALPTFDSGHCTAEEVFASEDESEESSSL
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SAEEEDSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLKEEEDYKEENNDSKE
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRVNQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEELY
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDAEY
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 DEGESTYFDDLKGEMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEFVQN
::::::::::::::::::::
XP_005 DEGESTYFDDLKGEMQKQAQ----------------------------------------
850 860
910 920 930 940 950 960
pF1KA0 FDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIE
:::::::::::::::::::::::::::::::::::::
XP_005 -----------------------MRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIE
870 880 890
970 980 990 1000 1010 1020
pF1KA0 DHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DHNGRQRLLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKS
900 910 920 930 940 950
1030 1040 1050 1060 1070 1080
pF1KA0 IKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALRAPEG
960 970 980 990 1000 1010
1090 1100 1110 1120 1130 1140
pF1KA0 AFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHG
1020 1030 1040 1050 1060 1070
1150 1160 1170 1180 1190 1200
pF1KA0 VRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRPAVIR
1080 1090 1100 1110 1120 1130
1210 1220 1230 1240 1250 1260
pF1KA0 EPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFR
1140 1150 1160 1170 1180 1190
1270 1280
pF1KA0 IQGQKERRNQKSSLKGAEGQLQ
::::::::::::::::::::::
XP_005 IQGQKERRNQKSSLKGAEGQLQ
1200 1210
>>NP_060598 (OMIM: 611214) pre-rRNA-processing protein T (804 aa)
initn: 488 init1: 165 opt: 396 Z-score: 284.0 bits: 64.1 E(85289): 4.5e-09
Smith-Waterman score: 398; 22.8% identity (54.5% similar) in 486 aa overlap (636-1112:332-781)
610 620 630 640 650
pF1KA0 DSENEEAIRKKLSKPSQVSSGQKLGPQNFIDETSDIENLLK---EEEDYKEENNDSK---
: ..:.:. :: . . ..:. ...
NP_060 IDAPGDPFPLNPRGIKPQKDPDMAMEICATDAVDDMEEGLKVLMKADPGRQESLQAEVIP
310 320 330 340 350 360
660 670 680 690 700 710
pF1KA0 -ETSGALKWKEDLSRKAAEAFLRQQQAAPNLRKLIYGTVTEDNEEEDDDTLEELGGLFRV
: : . . :. ::.... . ..:. :: . . : : ::
NP_060 DPMEGEQTWPTEEELSEAKDFLKESSKV--VKKVPKGTSSYQAEWILD------GGSQSG
370 380 390 400 410
720 730 740 750 760 770
pF1KA0 NQPDRECKHKADSLDCSRFLVEAPHDWDLEEVMNSIRDCFVTGKWEDDKDAAKVLAEDEE
.. : ... :... :. : .: . :: :.. .. . :
NP_060 GEGD---EYEYDDMEHEDFMEEESQDESSEE--------------EEEYETMTI---GES
420 430 440 450
780 790 800 810 820 830
pF1KA0 LYGDFEDLETGDVHKGKSGPNTQNEDIEKEVKEEIDPDEEESAKKKHLDKKRKLKEMFDA
.. :. : .. . ..: . ..: .:. .:.: .. .:. . ..: : :: . .
NP_060 VHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIR-FQKYRGLKSFRTS
460 470 480 490 500 510
840 850 860 870 880 890
pF1KA0 EYDEGESTYFDDLKG-EMQKQAQLNRAEFEDQDDEARVQYEGFRPGMYVRIEIENVPCEF
.: :. : . ..:. .. .. :.. ... . :: . : :: ... .::
NP_060 PWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEK---EVEGAEVGWYVTLHVSEVPVSV
520 530 540 550 560
900 910 920 930 940 950
pF1KA0 VQNFDPHYPIILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLY
:. : :.: .: : ... ..: ... . .:... .:: :.:::.. ::.
NP_060 VECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFRASPLF
570 580 590 600 610 620
960 970 980 990 1000 1010
pF1KA0 YIEDHNGRQRLLKYTPQHMHCGAAFWGPIT-PQGTGFLAIQSVSGIMPDFRIAATGVVLD
. ...: .. : :. ..::: : .. .: :. .:. . ::: ...
NP_060 SQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFKQKSNGMHS---LIATGHLMS
630 640 650 660 670 680
1020 1030 1040 1050 1060 1070
pF1KA0 LDKSIKIVKKLKLTGFPYKIFKNTSFIKGMFNSALEVAKFEGAVIRTVSGIRGQIKKALR
.: . ..:.. :.: :.::: . . .. :: . .: :. . .:: : ::.::. :
NP_060 VDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGHIKEPL-
690 700 710 720 730 740
1080 1090 1100 1110 1120 1130
pF1KA0 APEGAFRASFEDKLLMSDIVFMRTWYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLR
. .: .. ::. :: .: :.: . : :.:
NP_060 GTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYDPYVPEPVPWLKSEISSTVPQGGME
750 760 770 780 790 800
1140 1150 1160 1170 1180 1190
pF1KA0 LAHGVRLKANKDSLYKPILRQKKHFNSLHIPKALQKALPFKNKPKTQAKAGKVPKDRRRP
1282 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 09:12:04 2016 done: Thu Nov 3 09:12:06 2016
Total Scan time: 18.230 Total Display time: 0.420
Function used was FASTA [36.3.4 Apr, 2011]