Result of FASTA (omim) for
pF1KA0129
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0129, 442 aa
1>>>pF1KA0129 442 - 442 aa - 442 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.0496+/-0.000351; mu= 14.9392+/- 0.022
mean_var=109.2655+/-22.059, 0's: 0 Z-trim(116.8): 240 B-trim: 195 in 1/56
Lambda= 0.122697
statistics sampled from 28003 (28267) to 28003 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.699), E-opt: 0.2 (0.331), width: 16
Scan time: 9.510
The best scores are: opt bits E(85289)
XP_016870842 (OMIM: 606556) PREDICTED: tripartite ( 442) 3024 546.1 6.6e-155
XP_016870841 (OMIM: 606556) PREDICTED: tripartite ( 442) 3024 546.1 6.6e-155
XP_005252377 (OMIM: 606556) PREDICTED: tripartite ( 442) 3024 546.1 6.6e-155
NP_055603 (OMIM: 606556) tripartite motif-containi ( 442) 3024 546.1 6.6e-155
NP_150088 (OMIM: 606556) tripartite motif-containi ( 442) 3024 546.1 6.6e-155
XP_006717401 (OMIM: 606556) PREDICTED: tripartite ( 392) 2515 456.0 8.1e-128
XP_011517546 (OMIM: 606556) PREDICTED: tripartite ( 285) 1960 357.6 2.4e-98
XP_016870843 (OMIM: 606556) PREDICTED: tripartite ( 297) 1776 325.1 1.6e-88
NP_006461 (OMIM: 609505) tripartite motif-containi ( 564) 394 80.7 1.1e-14
NP_976040 (OMIM: 609315) tripartite motif-containi ( 303) 330 69.1 1.8e-11
NP_976041 (OMIM: 609315) tripartite motif-containi ( 303) 330 69.1 1.8e-11
NP_976039 (OMIM: 609315) tripartite motif-containi ( 303) 330 69.1 1.8e-11
XP_016865392 (OMIM: 609315) PREDICTED: tripartite ( 303) 330 69.1 1.8e-11
NP_976042 (OMIM: 609315) tripartite motif-containi ( 329) 330 69.1 1.9e-11
NP_976038 (OMIM: 609315) tripartite motif-containi ( 511) 330 69.3 2.6e-11
NP_005073 (OMIM: 600453) E3 ubiquitin/ISG15 ligase ( 630) 325 68.5 5.7e-11
NP_001184162 (OMIM: 613590) butyrophilin subfamily ( 466) 323 68.0 5.8e-11
NP_001184168 (OMIM: 613591) butyrophilin subfamily ( 313) 320 67.4 6.3e-11
XP_011512533 (OMIM: 613591) PREDICTED: butyrophili ( 313) 320 67.4 6.3e-11
NP_008980 (OMIM: 613590) butyrophilin subfamily 2 ( 527) 323 68.1 6.4e-11
NP_001317412 (OMIM: 616755) E3 ubiquitin-protein l ( 354) 320 67.4 6.9e-11
NP_006501 (OMIM: 602165) zinc finger protein RFP [ ( 513) 322 67.9 7.1e-11
NP_060677 (OMIM: 616755) E3 ubiquitin-protein liga ( 475) 321 67.7 7.6e-11
NP_853509 (OMIM: 613591) butyrophilin subfamily 2 ( 407) 320 67.4 7.6e-11
XP_016865656 (OMIM: 613591) PREDICTED: butyrophili ( 407) 320 67.4 7.6e-11
XP_005248855 (OMIM: 613591) PREDICTED: butyrophili ( 407) 320 67.4 7.6e-11
XP_011512531 (OMIM: 613591) PREDICTED: butyrophili ( 461) 320 67.5 8.4e-11
XP_016865655 (OMIM: 613591) PREDICTED: butyrophili ( 461) 320 67.5 8.4e-11
XP_016857118 (OMIM: 616755) PREDICTED: E3 ubiquiti ( 555) 321 67.7 8.5e-11
NP_001184166 (OMIM: 613591) butyrophilin subfamily ( 523) 320 67.5 9.2e-11
XP_011512530 (OMIM: 613591) PREDICTED: butyrophili ( 523) 320 67.5 9.2e-11
XP_005248854 (OMIM: 613591) PREDICTED: butyrophili ( 523) 320 67.5 9.2e-11
XP_006715016 (OMIM: 613591) PREDICTED: butyrophili ( 523) 320 67.5 9.2e-11
NP_008926 (OMIM: 613591) butyrophilin subfamily 2 ( 523) 320 67.5 9.2e-11
XP_016857119 (OMIM: 616755) PREDICTED: E3 ubiquiti ( 544) 317 67.0 1.4e-10
XP_011538873 (OMIM: 111620,111750,609017) PREDICTE ( 468) 315 66.6 1.6e-10
XP_011538872 (OMIM: 111620,111750,609017) PREDICTE ( 475) 315 66.6 1.6e-10
XP_006710376 (OMIM: 111620,111750,609017) PREDICTE ( 475) 315 66.6 1.6e-10
NP_061008 (OMIM: 111620,111750,609017) erythroid m ( 475) 315 66.6 1.6e-10
NP_001017922 (OMIM: 111620,111750,609017) erythroi ( 475) 315 66.6 1.6e-10
NP_258411 (OMIM: 611041) tripartite motif-containi ( 638) 311 66.0 3.2e-10
NP_001723 (OMIM: 601610) butyrophilin subfamily 1 ( 526) 304 64.7 6.6e-10
XP_005249397 (OMIM: 601610) PREDICTED: butyrophili ( 626) 304 64.8 7.5e-10
NP_150631 (OMIM: 189960,300000,300552) E3 ubiquiti ( 629) 304 64.8 7.5e-10
XP_016885028 (OMIM: 189960,300000,300552) PREDICTE ( 629) 304 64.8 7.5e-10
XP_016885027 (OMIM: 189960,300000,300552) PREDICTE ( 629) 304 64.8 7.5e-10
XP_016885026 (OMIM: 189960,300000,300552) PREDICTE ( 629) 304 64.8 7.5e-10
XP_016885024 (OMIM: 189960,300000,300552) PREDICTE ( 680) 304 64.8 7.9e-10
XP_006724555 (OMIM: 189960,300000,300552) PREDICTE ( 718) 304 64.8 8.3e-10
XP_011543828 (OMIM: 189960,300000,300552) PREDICTE ( 718) 304 64.8 8.3e-10
>>XP_016870842 (OMIM: 606556) PREDICTED: tripartite moti (442 aa)
initn: 3024 init1: 3024 opt: 3024 Z-score: 2902.0 bits: 546.1 E(85289): 6.6e-155
Smith-Waterman score: 3024; 100.0% identity (100.0% similar) in 442 aa overlap (1-442:1-442)
10 20 30 40 50 60
pF1KA0 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
370 380 390 400 410 420
430 440
pF1KA0 FQEPLYPALRLWEGAISIPRLP
::::::::::::::::::::::
XP_016 FQEPLYPALRLWEGAISIPRLP
430 440
>>XP_016870841 (OMIM: 606556) PREDICTED: tripartite moti (442 aa)
initn: 3024 init1: 3024 opt: 3024 Z-score: 2902.0 bits: 546.1 E(85289): 6.6e-155
Smith-Waterman score: 3024; 100.0% identity (100.0% similar) in 442 aa overlap (1-442:1-442)
10 20 30 40 50 60
pF1KA0 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
370 380 390 400 410 420
430 440
pF1KA0 FQEPLYPALRLWEGAISIPRLP
::::::::::::::::::::::
XP_016 FQEPLYPALRLWEGAISIPRLP
430 440
>>XP_005252377 (OMIM: 606556) PREDICTED: tripartite moti (442 aa)
initn: 3024 init1: 3024 opt: 3024 Z-score: 2902.0 bits: 546.1 E(85289): 6.6e-155
Smith-Waterman score: 3024; 100.0% identity (100.0% similar) in 442 aa overlap (1-442:1-442)
10 20 30 40 50 60
pF1KA0 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
370 380 390 400 410 420
430 440
pF1KA0 FQEPLYPALRLWEGAISIPRLP
::::::::::::::::::::::
XP_005 FQEPLYPALRLWEGAISIPRLP
430 440
>>NP_055603 (OMIM: 606556) tripartite motif-containing p (442 aa)
initn: 3024 init1: 3024 opt: 3024 Z-score: 2902.0 bits: 546.1 E(85289): 6.6e-155
Smith-Waterman score: 3024; 100.0% identity (100.0% similar) in 442 aa overlap (1-442:1-442)
10 20 30 40 50 60
pF1KA0 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
370 380 390 400 410 420
430 440
pF1KA0 FQEPLYPALRLWEGAISIPRLP
::::::::::::::::::::::
NP_055 FQEPLYPALRLWEGAISIPRLP
430 440
>>NP_150088 (OMIM: 606556) tripartite motif-containing p (442 aa)
initn: 3024 init1: 3024 opt: 3024 Z-score: 2902.0 bits: 546.1 E(85289): 6.6e-155
Smith-Waterman score: 3024; 100.0% identity (100.0% similar) in 442 aa overlap (1-442:1-442)
10 20 30 40 50 60
pF1KA0 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_150 SWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAT
370 380 390 400 410 420
430 440
pF1KA0 FQEPLYPALRLWEGAISIPRLP
::::::::::::::::::::::
NP_150 FQEPLYPALRLWEGAISIPRLP
430 440
>>XP_006717401 (OMIM: 606556) PREDICTED: tripartite moti (392 aa)
initn: 2515 init1: 2515 opt: 2515 Z-score: 2415.8 bits: 456.0 E(85289): 8.1e-128
Smith-Waterman score: 2515; 99.2% identity (100.0% similar) in 376 aa overlap (67-442:17-392)
40 50 60 70 80 90
pF1KA0 RRCRRCVCALCPVLGAHRGHPVGLALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDA
...:::::::::::::::::::::::::::
XP_006 MTLGKLPHLQMPPLEKNTRKLSQECLKQLAIKKQQHIDNITQIEDA
10 20 30 40
100 110 120 130 140 150
pF1KA0 TEKLKANAESSKTWLKGKFTELRLLLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TEKLKANAESSKTWLKGKFTELRLLLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLD
50 60 70 80 90 100
160 170 180 190 200 210
pF1KA0 IMNDLSNRVWSISQEPDPVQRLQAYTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IMNDLSNRVWSISQEPDPVQRLQAYTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLV
110 120 130 140 150 160
220 230 240 250 260 270
pF1KA0 EAVESTLQTPLDIRLKESINCQLSDPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EAVESTLQTPLDIRLKESINCQLSDPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTM
170 180 190 200 210 220
280 290 300 310 320 330
pF1KA0 HARLRLSADRLTVRCGLLGSLGPVPVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HARLRLSADRLTVRCGLLGSLGPVPVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWW
230 240 250 260 270 280
340 350 360 370 380 390
pF1KA0 VGAAYASLRRRGASAAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VGAAYASLRRRGASAAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLD
290 300 310 320 330 340
400 410 420 430 440
pF1KA0 YEAGVLAFYDVTGGMSHLHTFRATFQEPLYPALRLWEGAISIPRLP
::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YEAGVLAFYDVTGGMSHLHTFRATFQEPLYPALRLWEGAISIPRLP
350 360 370 380 390
>>XP_011517546 (OMIM: 606556) PREDICTED: tripartite moti (285 aa)
initn: 1960 init1: 1960 opt: 1960 Z-score: 1886.7 bits: 357.6 E(85289): 2.4e-98
Smith-Waterman score: 1960; 100.0% identity (100.0% similar) in 285 aa overlap (158-442:1-285)
130 140 150 160 170 180
pF1KA0 LAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQAYTATEQE
::::::::::::::::::::::::::::::
XP_011 MNDLSNRVWSISQEPDPVQRLQAYTATEQE
10 20 30
190 200 210 220 230 240
pF1KA0 MQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLSDPSSTKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLSDPSSTKP
40 50 60 70 80 90
250 260 270 280 290 300
pF1KA0 GTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPVPVLRFDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPVPVLRFDA
100 110 120 130 140 150
310 320 330 340 350 360
pF1KA0 LWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQSWCLKRY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQSWCLKRY
160 170 180 190 200 210
370 380 390 400 410 420
pF1KA0 DLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLYP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLYP
220 230 240 250 260 270
430 440
pF1KA0 ALRLWEGAISIPRLP
:::::::::::::::
XP_011 ALRLWEGAISIPRLP
280
>>XP_016870843 (OMIM: 606556) PREDICTED: tripartite moti (297 aa)
initn: 1774 init1: 1774 opt: 1776 Z-score: 1710.4 bits: 325.1 E(85289): 1.6e-88
Smith-Waterman score: 1776; 97.4% identity (97.8% similar) in 273 aa overlap (1-273:1-273)
10 20 30 40 50 60
pF1KA0 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALCPVLGAHRGHPVGL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWSISQEPDPVQRLQA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPLDIRLKESINCQLS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 DPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPV
::::::::::::::::::::::::: . :
XP_016 DPSSTKPGTLLKTSPSPERSLLLKYQEMEISTPQKSSSCAFLFTIPKGDPLSRLLGL
250 260 270 280 290
310 320 330 340 350 360
pF1KA0 PVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQ
>>NP_006461 (OMIM: 609505) tripartite motif-containing p (564 aa)
initn: 198 init1: 80 opt: 394 Z-score: 384.6 bits: 80.7 E(85289): 1.1e-14
Smith-Waterman score: 412; 26.7% identity (55.4% similar) in 453 aa overlap (14-438:120-545)
10 20 30 40
pF1KA0 MAGAATGSRTPGRSELVEGCGWR-CPEHGDRVAELFCRRCRRC
.: :. .:: :: : . .. :: ..:
NP_006 VKSCLTCMVNYCEEHLQPHQVNIKLQSHLLTEPVKDHNWRYCPAHHSPLSA-FCCPDQQC
90 100 110 120 130 140
50 60 70 80 90 100
pF1KA0 VCALCPVLGAHRGHPVGLALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKA
.: : : :: . ..:.:: . .. .: :: .... ... :.: .:.:
NP_006 ICQDC--CQEHSGHTI-VSLDAARRDKEAELQCT-QLDLERKLKLN-----ENAISRLQA
150 160 170 180 190
110 120 130 140 150
pF1KA0 NAES---SKTWLKG----KFTELRLLLDEEEALAKKFIDKNTQLTLQVYREQADSCREQL
: .: : . .:. .: :: . . .: . :.... : .:. ::.. . .:
NP_006 NQKSVLVSVSEVKAVAEMQFGELLAAVRKAQANVMLFLEEKEQAALS----QANGIKAHL
200 210 220 230 240 250
160 170 180 190 200 210
pF1KA0 DIMNDLSNRVWSISQEPDPVQRLQAYTATEQEMQQQMSLGELCH-PVPLSFEPVKSFFKG
. : . . . ..:. : . : : ... .. . : . .:. ..:
NP_006 EY------RSAEMEKSKQELERMAAISNTVQFLEEYCKFKNTEDITFPSVYVGLKDKLSG
260 270 280 290 300
220 230 240 250 260
pF1KA0 LVEAV-ESTLQTPLDIRLKESINCQLSDPSS-------TKPGTLLK-----TSPSPE-RS
. ... :::.. :.: :. . .:.. :. :. ..... ..: : :
NP_006 IRKVITESTVHL---IQLLENYKKKLQEFSKEEEYDIRTQVSAVVQRKYWTSKPEPSTRE
310 320 330 340 350 360
270 280 290 300 310
pF1KA0 LLLKYARTPTLDPDTMHARLRLSADRLTVRCGLLGSLGPVPVL--RFDALWQVLARDCFA
.:.:: :.:::: : :::. . : . : : : :: :::... .
NP_006 QFLQYAYDITFDPDTAHKYLRLQEENRKVT-NTTPWEHPYPDLPSRFLHWRQVLSQQSLY
370 380 390 400 410 420
320 330 340 350 360 370
pF1KA0 TGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQSWCLKRYDLEYWAFHDGQ
:.:.::.. ::: .:: . .. :.: . .. : :: :. :. :... .
NP_006 LHRYYFEVEI--FGAGTYVGLTCKGIDRKGEERNSCISGNNFSWSLQWNGKEFTAWYSDM
430 440 450 460 470 480
380 390 400 410 420 430
pF1KA0 RSRLRPRDDLDRLGVFLDYEAGVLAFYDVT-GGMSHLHTFRATFQEPLYPALRL--WEGA
.. :. . ::::..:. .:.:.:: : :. .: : :.::.: :. : :.:
NP_006 ETPLKA-GPFRRLGVYIDFPGGILSFYGVEYDTMTLVHKFACKFSEPVYAAFWLSKKENA
490 500 510 520 530 540
440
pF1KA0 ISIPRLP
: :
NP_006 IRIVDLGEEPEKPAPSLVGTAP
550 560
>>NP_976040 (OMIM: 609315) tripartite motif-containing p (303 aa)
initn: 283 init1: 155 opt: 330 Z-score: 326.9 bits: 69.1 E(85289): 1.8e-11
Smith-Waterman score: 342; 30.6% identity (54.8% similar) in 330 aa overlap (104-427:3-288)
80 90 100 110 120 130
pF1KA0 ECLKQLAIKKQQHIDNITQIEDATEKLKANAESSKTWLKGKFTELRLLLDEEEALAKKFI
::. : . ..: :: .: :.:. ...
NP_976 MAAEQEK--VGAEFQALRAFLVEQEG---RLL
10 20
140 150 160 170 180
pF1KA0 DKNTQLTLQVYREQADSCREQLDI----MNDLSNRVWSISQEPDPVQRLQAYTATEQEMQ
. .:. .: ..: .. :: . .. ::... .:.:: .. :: . .: ..
NP_976 GRLEELSREVAQKQNENL-AQLGVEITQLSKLSSQIQETAQKPD-LDFLQEFKSTLSR--
30 40 50 60 70 80
190 200 210 220 230 240
pF1KA0 QQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPL-DIRLKESINCQLSDPSSTKPG
: :: . .:. .: : ... . .. :: . :.
NP_976 --------CSNVP-GPKPT---------TVSSEMKNKVWNVSLKTFV---LKG-------
90 100 110
250 260 270 280 290 300
pF1KA0 TLLKTSPSPERSLLLKYARTP-TLDPDTMHARLRLSADRLTVRCGLLGSLGPVPVLRFDA
.:: :. : : .. :::::: . :: :: : :: : .. : :::.
NP_976 -MLKKFKEDLRGELEKEEKVELTLDPDTANPRLILSLDLKGVRLGERAQDLPNHPCRFDT
120 130 140 150 160 170
310 320 330 340 350 360
pF1KA0 LWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRRGASAAARLGCNRQSWCLKRY
.::: :..:::.:::.: . :: :.: :.::.: . . .. : :.
NP_976 NTRVLASCGFSSGRHHWEVEVG-SKDGWAFGVARESVRRKGLTP---FTPEEGVWALQLN
180 190 200 210 220 230
370 380 390 400 410 420
pF1KA0 DLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRATFQEPLYP
.::: . .:: : :.:. : :: :.:...:: : : ::.:::..::: ..:
NP_976 GGQYWAVTSPERSPLSC-GHLSRVRVALDLEVGAVSFYAVED-MRHLYTFRVNFQERVFP
240 250 260 270 280
430 440
pF1KA0 ALRLWEGAISIPRLP
NP_976 LFSVCSTGTYLRIWP
290 300
442 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 06:38:14 2016 done: Sat Nov 5 06:38:16 2016
Total Scan time: 9.510 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]