Result of FASTA (ccds) for
pF1KA0109
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0109, 435 aa
1>>>pF1KA0109 435 - 435 aa - 435 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9914+/-0.0013; mu= 13.1325+/- 0.078
mean_var=62.6462+/-12.138, 0's: 0 Z-trim(99.4): 40 B-trim: 0 in 0/49
Lambda= 0.162042
statistics sampled from 5680 (5711) to 5680 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.527), E-opt: 0.2 (0.175), width: 16
Scan time: 2.660
The best scores are: opt bits E(32554)
CCDS43177.1 AP2M1 gene_id:1173|Hs108|chr3 ( 435) 2853 676.3 1.6e-194
CCDS43178.1 AP2M1 gene_id:1173|Hs108|chr3 ( 433) 2822 669.0 2.5e-192
CCDS82880.1 AP2M1 gene_id:1173|Hs108|chr3 ( 460) 2686 637.2 9.8e-183
CCDS46008.1 AP1M1 gene_id:8907|Hs108|chr19 ( 435) 1072 259.9 3.6e-69
CCDS77234.1 AP1M2 gene_id:10053|Hs108|chr19 ( 425) 772 189.8 4.5e-48
CCDS45964.1 AP1M2 gene_id:10053|Hs108|chr19 ( 423) 769 189.1 7.3e-48
CCDS12342.1 AP1M1 gene_id:8907|Hs108|chr19 ( 423) 761 187.2 2.7e-47
CCDS5685.1 AP4M1 gene_id:9179|Hs108|chr7 ( 453) 559 140.0 4.7e-33
CCDS6125.1 AP3M2 gene_id:10947|Hs108|chr8 ( 418) 393 101.2 2.1e-21
CCDS7342.1 AP3M1 gene_id:26985|Hs108|chr10 ( 418) 383 98.8 1.1e-20
>>CCDS43177.1 AP2M1 gene_id:1173|Hs108|chr3 (435 aa)
initn: 2853 init1: 2853 opt: 2853 Z-score: 3605.6 bits: 676.3 E(32554): 1.6e-194
Smith-Waterman score: 2853; 100.0% identity (100.0% similar) in 435 aa overlap (1-435:1-435)
10 20 30 40 50 60
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 SNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 PQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLES
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLES
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 VNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 IAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 LEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 MKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYLKVFEPKLNYSDHDVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYLKVFEPKLNYSDHDVIK
370 380 390 400 410 420
430
pF1KA0 WVRYIGRSGIYETRC
:::::::::::::::
CCDS43 WVRYIGRSGIYETRC
430
>>CCDS43178.1 AP2M1 gene_id:1173|Hs108|chr3 (433 aa)
initn: 1931 init1: 1931 opt: 2822 Z-score: 3566.4 bits: 669.0 E(32554): 2.5e-192
Smith-Waterman score: 2822; 99.5% identity (99.5% similar) in 435 aa overlap (1-435:1-433)
10 20 30 40 50 60
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQVRSPVTNIARTSFFHVKR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 SNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGY
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 PQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLES
::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
CCDS43 PQNSETGALKTFITQQGIKSQ--TKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLES
130 140 150 160 170
190 200 210 220 230 240
pF1KA0 VNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQS
180 190 200 210 220 230
250 260 270 280 290 300
pF1KA0 IAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 IAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTK
240 250 260 270 280 290
310 320 330 340 350 360
pF1KA0 LEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 LEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAG
300 310 320 330 340 350
370 380 390 400 410 420
pF1KA0 MKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYLKVFEPKLNYSDHDVIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGLKVRYLKVFEPKLNYSDHDVIK
360 370 380 390 400 410
430
pF1KA0 WVRYIGRSGIYETRC
:::::::::::::::
CCDS43 WVRYIGRSGIYETRC
420 430
>>CCDS82880.1 AP2M1 gene_id:1173|Hs108|chr3 (460 aa)
initn: 2839 init1: 2686 opt: 2686 Z-score: 3394.2 bits: 637.2 E(32554): 9.8e-183
Smith-Waterman score: 2793; 94.6% identity (94.6% similar) in 460 aa overlap (1-435:1-460)
10 20 30
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIG-------------------------RNAVDAFRVN
::::::::::::::::::::::::: ::::::::::
CCDS82 MIGGLFIYNHKGEVLISRVYRDDIGSRQAADSAVFSSSGPFPGEWLEANRRNAVDAFRVN
10 20 30 40 50 60
40 50 60 70 80 90
pF1KA0 VIHARQQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VIHARQQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGK
70 80 90 100 110 120
100 110 120 130 140 150
pF1KA0 ISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQV
130 140 150 160 170 180
160 170 180 190 200 210
pF1KA0 TGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TGQIGWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFG
190 200 210 220 230 240
220 230 240 250 260 270
pF1KA0 MNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MNDKIVIEKQGKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELM
250 260 270 280 290 300
280 290 300 310 320 330
pF1KA0 RYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 RYRTTKDIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQV
310 320 330 340 350 360
340 350 360 370 380 390
pF1KA0 ICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFA
370 380 390 400 410 420
400 410 420 430
pF1KA0 PSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC
::::::::::::::::::::::::::::::::::::::::
CCDS82 PSGLKVRYLKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC
430 440 450 460
>>CCDS46008.1 AP1M1 gene_id:8907|Hs108|chr19 (435 aa)
initn: 953 init1: 545 opt: 1072 Z-score: 1355.4 bits: 259.9 E(32554): 3.6e-69
Smith-Waterman score: 1072; 38.5% identity (70.9% similar) in 444 aa overlap (5-434:6-433)
10 20 30 40 50
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHV
... . ::.::: : :: :. . :. : ... ... . ::. . . :. .
CCDS46 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDF
:..:..:.:..:.:. ...:: ::::. .:.. :: .. ::.:..:::.:::::::..::
CCDS46 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 GYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVL
::::.... :. .:::.: :. . . . ::. ..:: ::::::.::.::::.
CCDS46 GYPQTTDSKILQEYITQEG----HKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVI
130 140 150 160 170
180 190 200 210 220
pF1KA0 ESVNLL------------MSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQG
:::::: .: .:.:: ... : . :. .:::::: ..:.:::..... :
CCDS46 ESVNLLGKYPGVGWLGHTVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTG
180 190 200 210 220 230
230 240 250 260 270 280
pF1KA0 KGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILP
.: :: .:. ..: ::::::::.:...:.::::::::::::: :: . .
CCDS46 RG------KS--KSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPL
240 250 260 270 280
290 300 310 320 330 340
pF1KA0 FRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKA
. . .... .....: . ::.:: :...:..::.: .... . :..:.
CCDS46 IWIESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVP
290 300 310 320 330 340
350 360 370 380 390 400
pF1KA0 SENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLK
.. :::.:: . : :: . :.. : .. . : ..::::..::.: :. ::..:::::
CCDS46 ENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLK
350 360 370 380 390 400
410 420 430
pF1KA0 VFEPKLNYSDHDVIKWVRYIGRSGIYETRC
..: : .... ::::: ..: :. :
CCDS46 IIEK----SGYQALPWVRYITQNGDYQLRTQ
410 420 430
>>CCDS77234.1 AP1M2 gene_id:10053|Hs108|chr19 (425 aa)
initn: 1089 init1: 382 opt: 772 Z-score: 976.5 bits: 189.8 E(32554): 4.5e-48
Smith-Waterman score: 1109; 38.8% identity (74.1% similar) in 433 aa overlap (5-434:6-423)
10 20 30 40 50
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHV
.:: . ::. :::: :. :.. . .. : ... ... . .:. . ... :. .
CCDS77 MSASAVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDF
:.::..:.:.:..:.::..:. :::: .:. :: .. ::.:..:::..::::::..::
CCDS77 KHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 GYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVL
:.::.... :. .::::. : . .:.. ::. ..:: :::::..::.:.::.
CCDS77 GFPQTTDSKILQEYITQQSNK----LETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVI
130 140 150 160 170
180 190 200 210 220 230
pF1KA0 ESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGK
::::::.. .:.:: ... : . .: .:::::: ..:.::....: : : : .
CCDS77 ESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTG------LSGSKN
180 190 200 210 220 230
240 250 260 270 280 290
pF1KA0 QSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGR
.:. ..: ::::::::.::..:.::::::::.:::: :: . .. . . .... ..
CCDS77 KSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSH
240 250 260 270 280 290
300 310 320 330 340 350
pF1KA0 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRM
...:. : :..:: . .:. .:. .:.: .... . :.::: .:...:.:: .
CCDS77 SRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSF
300 310 320 330 340 350
360 370 380 390 400 410
pF1KA0 AGMKESQISAEIELLPTNDKKKW-ARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDH
: :: . :.. : :. .:.. .::::...::.: :. ::..:::.:..: : .
CCDS77 PGGKEYLMRAHFGL-PSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEK----SGY
360 370 380 390 400
420 430
pF1KA0 DVIKWVRYIGRSGIYETRC
... ::::: .:: :. :
CCDS77 QALPWVRYITQSGDYQLRTS
410 420
>>CCDS45964.1 AP1M2 gene_id:10053|Hs108|chr19 (423 aa)
initn: 1092 init1: 382 opt: 769 Z-score: 972.8 bits: 189.1 E(32554): 7.3e-48
Smith-Waterman score: 1106; 38.6% identity (74.1% similar) in 433 aa overlap (5-434:6-421)
10 20 30 40 50
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHV
.:: . ::. :::: :. :.. . .. : ... ... . .:. . ... :. .
CCDS45 MSASAVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDF
:.::..:.:.:..:.::..:. :::: .:. :: .. ::.:..:::..::::::..::
CCDS45 KHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 GYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVL
:.::.... :. .::::. : . .:.. ::. ..:: :::::..::.:.::.
CCDS45 GFPQTTDSKILQEYITQQSNK----LETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVI
130 140 150 160 170
180 190 200 210 220 230
pF1KA0 ESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGK
::::::.. .:.:: ... : . .: .:::::: ..:.::....: :. : .
CCDS45 ESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGR--------SKN
180 190 200 210 220
240 250 260 270 280 290
pF1KA0 QSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGR
.:. ..: ::::::::.::..:.::::::::.:::: :: . .. . . .... ..
CCDS45 KSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSH
230 240 250 260 270 280
300 310 320 330 340 350
pF1KA0 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRM
...:. : :..:: . .:. .:. .:.: .... . :.::: .:...:.:: .
CCDS45 SRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSF
290 300 310 320 330 340
360 370 380 390 400 410
pF1KA0 AGMKESQISAEIELLPTNDKKKW-ARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDH
: :: . :.. : :. .:.. .::::...::.: :. ::..:::.:..: : .
CCDS45 PGGKEYLMRAHFGL-PSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEK----SGY
350 360 370 380 390 400
420 430
pF1KA0 DVIKWVRYIGRSGIYETRC
... ::::: .:: :. :
CCDS45 QALPWVRYITQSGDYQLRTS
410 420
>>CCDS12342.1 AP1M1 gene_id:8907|Hs108|chr19 (423 aa)
initn: 1087 init1: 365 opt: 761 Z-score: 962.7 bits: 187.2 E(32554): 2.7e-47
Smith-Waterman score: 1106; 39.6% identity (72.9% similar) in 432 aa overlap (5-434:6-421)
10 20 30 40 50
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHV
... . ::.::: : :: :. . :. : ... ... . ::. . . :. .
CCDS12 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDF
:..:..:.:..:.:. ...:: ::::. .:.. :: .. ::.:..:::.:::::::..::
CCDS12 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 GYPQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVL
::::.... :. .:::.: :. . . . ::. ..:: ::::::.::.::::.
CCDS12 GYPQTTDSKILQEYITQEG----HKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVI
130 140 150 160 170
180 190 200 210 220 230
pF1KA0 ESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGK
::::::.: .:.:: ... : . :. .:::::: ..:.:::..... :.: ::
CCDS12 ESVNLLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRG------KS--
180 190 200 210 220
240 250 260 270 280 290
pF1KA0 QSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGR
.:. ..: ::::::::.:...:.::::::::::::: :: . . . . .... ..
CCDS12 KSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSH
230 240 250 260 270 280
300 310 320 330 340 350
pF1KA0 TKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRM
...: . ::.:: :...:..::.: .... . :..:. .. :::.:: .
CCDS12 SRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSF
290 300 310 320 330 340
360 370 380 390 400 410
pF1KA0 AGMKESQISAEIELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHD
: :: . :.. : .. . : ..::::..::.: :. ::..:::::..: : ..
CCDS12 PGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEK----SGYQ
350 360 370 380 390 400
420 430
pF1KA0 VIKWVRYIGRSGIYETRC
.. ::::: ..: :. :
CCDS12 ALPWVRYITQNGDYQLRTQ
410 420
>>CCDS5685.1 AP4M1 gene_id:9179|Hs108|chr7 (453 aa)
initn: 474 init1: 136 opt: 559 Z-score: 706.9 bits: 140.0 E(32554): 4.7e-33
Smith-Waterman score: 643; 29.2% identity (64.1% similar) in 465 aa overlap (1-434:1-452)
10 20 30 40 50
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIG-RNAVDAFRVNVIHARQQVRSPVTNIAR-TSFFHV
::. .:: . ::. :: . .: : : :.... : .. . .:::. . :.:.
CCDS56 MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGD-ESPVVMHHHGRHFIHI
10 20 30 40 50
60 70 80 90 100 110
pF1KA0 KRSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDF
..:...:...:..::. ..:.: .. ... : :...: .:. : .:.::::::.::.
CCDS56 RHSGLYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDY
60 70 80 90 100 110
120 130 140 150 160
pF1KA0 GYPQNSETGALKTFITQQGIKSQHQTKEEQSQI--------TSQVTGQIGWRREGIKYR-
:: :.. : :..:: ... :. . . :.. :.:. . . : .. :
CCDS56 GYVQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSSRS
120 130 140 150 160 170
170 180 190 200 210 220
pF1KA0 ----RNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQ
.::.::::.: ...:.. .:..:.. :.:.. .::.: . : ..:..... .
CCDS56 DQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCV---
180 190 200 210 220 230
230 240 250 260 270 280
pF1KA0 GKGTADETSKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDII-
:: .: : .: .:. .::. : :..:.:.: . . ::.::. .:::. . :.
CCDS56 GK---SELRGYGP-GIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDLPS
240 250 260 270 280 290
290 300 310 320 330 340
pF1KA0 -LPFRVIPLVR-EVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKA
::::..: :. . : .:.: . .. .. . : ......: : .. ... . .
CCDS56 PLPFRLFPSVQWDRGSGRLQVYLKLRCDLLSKSQALNVRLHLPLPRGVVSLSQELSSPEQ
300 310 320 330 340 350
350 360 370 380 390
pF1KA0 KYKASENAIVWKIKRMAGMKESQISAEIELL-------PTNDKKKWARP----PISMNFE
: . .:.:. : . :. : ::.:. ... :.. . : : : :..::
CCDS56 KAELAEGALRWDLPRVQGG--SQLSGLFQMDVPGPPGPPSHGLSTSASPLGLGPASLSFE
360 370 380 390 400 410
400 410 420 430
pF1KA0 VP-FAPSGLKVRYLKV-FEPKLNYSDHDVIKWVRYIGRSGIYETRC
.: . :::.::.:.. :.: : . : ::::....: : :
CCDS56 LPRHTCSGLQVRFLRLAFRPCGNANPH---KWVRHLSHSDAYVIRI
420 430 440 450
>>CCDS6125.1 AP3M2 gene_id:10947|Hs108|chr8 (418 aa)
initn: 514 init1: 205 opt: 393 Z-score: 497.8 bits: 101.2 E(32554): 2.1e-21
Smith-Waterman score: 578; 26.4% identity (59.3% similar) in 447 aa overlap (1-434:1-417)
10 20 30 40 50
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQ-QVRSPVTNIARTSFFHVK
:: .::. : .:.... . ... ..:.. : : .: . . :: . .. :
CCDS61 MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 RSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFG
: .:...:: . .: .:.:::... :.. ::: :: ::.: :..::.:.:.:: :
CCDS61 RHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 YPQNSETGALKTFITQQGI-KSQHQTKEEQSQITSQV-TGQIG---WRREGIKYRRNELF
.: .:.. :: .: : .. .: .... .:. :::.. ::: :.:: :: .
CCDS61 FPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA0 LDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFG-MNDKIVIEKQGKGTADET
.::.: .. ... .:....:...: . :.:::. .. :: ..
CCDS61 FDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRL-------------
190 200 210 220
240 250 260 270 280
pF1KA0 SKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKD--IILPFRV--
.:: .:: :::.....::: .:::::::.:.:. :... . . .: :
CCDS61 ---------LDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKH
230 240 250 260 270
290 300 310 320 330 340
pF1KA0 -IPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASE
: . . ..:. : :... .. . . : : .. .... .: .
CCDS61 NISFRDSSSLGRFEITVGPKQTMGKTI--EGVTVTSQMPKGVLNMSLTPSQGTHTFDPVT
280 290 300 310 320 330
350 360 370 380 390 400
pF1KA0 NAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVF
. . : . .. .: .... . : .: : :...:.. .: ::::: : ..
CCDS61 KMLSWDVGKINPQKLPSLKGTMSLQAGASKPD-ENPTINLQFKIQQLAISGLKVNRLDMY
340 350 360 370 380 390
410 420 430
pF1KA0 EPKLNYSDHDVIKWVRYIGRSGIYETRC
: . .: ..:. ..: ...:
CCDS61 GEK-----YKPFKGIKYMTKAGKFQVRT
400 410
>>CCDS7342.1 AP3M1 gene_id:26985|Hs108|chr10 (418 aa)
initn: 490 init1: 178 opt: 383 Z-score: 485.2 bits: 98.8 E(32554): 1.1e-20
Smith-Waterman score: 591; 26.2% identity (61.7% similar) in 447 aa overlap (1-434:1-417)
10 20 30 40 50
pF1KA0 MIGGLFIYNHKGEVLISRVYRDDIGRNAVDAF-RVNVIHARQQVRSPVTNIARTSFFHVK
:: .::. : .:.... . ... ..... : : ... : . :: . . .. .
CCDS73 MIHSLFLINCSGDIFLEKHWKSVVSQSVCDYFFEAQEKAADVENVPPVISTPHHYLISIY
10 20 30 40 50 60
60 70 80 90 100 110
pF1KA0 RSNIWLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFG
:.......: . .: .:.:::... :.. :::. :: ::.: :..::::.:.:: :
CCDS73 RDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNG
70 80 90 100 110 120
120 130 140 150 160 170
pF1KA0 YPQNSETGALKTFITQQGI-KSQHQTKEEQSQITSQV-TGQ---IGWRREGIKYRRNELF
.: .:.. :: .: : .: .. .:.. . . ::: : ::: :.:: :: .
CCDS73 FPLATESNILKELIKPPTILRSVVNSITGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KA0 LDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFG-MNDKIVIEKQGKGTADET
.::.: .. ... .:... :...: . :::::. ... :: ..
CCDS73 FDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRL-------------
190 200 210 220
240 250 260 270 280
pF1KA0 SKSGKQSIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKD--IILPFRV--
.:: .:: :.:.....::: .:::::::.:.:. ::.... . .: :
CCDS73 ---------LDDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKH
230 240 250 260 270
290 300 310 320 330 340
pF1KA0 -IPLVREVGRTKLEVKVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASE
: . .. . .... . :.:. .. . : : . : . .... .:. .
CCDS73 SISFKENSSCGRFDITIGPKQNMGKTI--EGITVTVHMPKVVLNMNLTPTQGSYTFDPVT
280 290 300 310 320 330
350 360 370 380 390 400
pF1KA0 NAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVF
....: . ... .: .... ..: .. : : ....:.. .: ::::: : ..
CCDS73 KVLTWDVGKITPQKLPSLKGLVNL-QSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMY
340 350 360 370 380 390
410 420 430
pF1KA0 EPKLNYSDHDVIKWVRYIGRSGIYETRC
: . .: :.:. ..: ...:
CCDS73 GEK-----YKPFKGVKYVTKAGKFQVRT
400 410
435 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 18:05:49 2016 done: Wed Nov 2 18:05:49 2016
Total Scan time: 2.660 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]