Result of FASTA (omim) for
pF1KA0066
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KA0066, 981 aa
1>>>pF1KA0066 981 - 981 aa - 981 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6244+/-0.000345; mu= 20.5833+/- 0.022
mean_var=81.1997+/-16.080, 0's: 0 Z-trim(114.5): 23 B-trim: 0 in 0/55
Lambda= 0.142330
statistics sampled from 24297 (24308) to 24297 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.653), E-opt: 0.2 (0.285), width: 16
Scan time: 10.900
The best scores are: opt bits E(85289)
NP_036365 (OMIM: 600118,602536) rab3 GTPase-activa ( 981) 6624 1370.5 0
NP_001165906 (OMIM: 600118,602536) rab3 GTPase-act ( 988) 6600 1365.6 0
XP_011509127 (OMIM: 600118,602536) PREDICTED: rab3 ( 979) 6559 1357.2 0
XP_011509125 (OMIM: 600118,602536) PREDICTED: rab3 (1024) 6559 1357.2 0
>>NP_036365 (OMIM: 600118,602536) rab3 GTPase-activating (981 aa)
initn: 6624 init1: 6624 opt: 6624 Z-score: 7344.9 bits: 1370.5 E(85289): 0
Smith-Waterman score: 6624; 100.0% identity (100.0% similar) in 981 aa overlap (1-981:1-981)
10 20 30 40 50 60
pF1KA0 MAADSEPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MAADSEPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KSDEISFADFKFSVTHHYLVQESTDKEGKDELLEDVVPQSMQDLLGMNNDFPPRAHCLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 KSDEISFADFKFSVTHHYLVQESTDKEGKDELLEDVVPQSMQDLLGMNNDFPPRAHCLVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 WYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 WYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 CQGPGVRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 CQGPGVRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 QYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 QYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 DLDPIQAPHWSVRVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 DLDPIQAPHWSVRVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 THALSKLTEPASVPIHKLSVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 THALSKLTEPASVPIHKLSVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 EKPLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 EKPLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 WQEFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 WQEFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 ESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 ESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 LGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 LPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 LPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 ALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 ALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 AQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSKALPQRMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 AQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSKALPQRMY
910 920 930 940 950 960
970 980
pF1KA0 SVLTKEDFRLAGAFSSDTSFF
:::::::::::::::::::::
NP_036 SVLTKEDFRLAGAFSSDTSFF
970 980
>>NP_001165906 (OMIM: 600118,602536) rab3 GTPase-activat (988 aa)
initn: 6104 init1: 6104 opt: 6600 Z-score: 7318.2 bits: 1365.6 E(85289): 0
Smith-Waterman score: 6600; 99.3% identity (99.3% similar) in 988 aa overlap (1-981:1-988)
10 20 30 40 50 60
pF1KA0 MAADSEPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAADSEPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KSDEISFADFKFSVTHHYLVQESTDKEGKDELLEDVVPQSMQDLLGMNNDFPPRAHCLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSDEISFADFKFSVTHHYLVQESTDKEGKDELLEDVVPQSMQDLLGMNNDFPPRAHCLVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 WYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 CQGPGVRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CQGPGVRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 QYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 DLDPIQAPHWSVRVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLDPIQAPHWSVRVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 THALSKLTEPASVPIHKLSVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 THALSKLTEPASVPIHKLSVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 EKPLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKPLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 WQEFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WQEFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 ESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 LGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 LPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 ALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
850 860 870 880 890 900
910 920 930 940 950
pF1KA0 AQR-------AAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSK
::: ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AQRLTESSDEAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSK
910 920 930 940 950 960
960 970 980
pF1KA0 ALPQRMYSVLTKEDFRLAGAFSSDTSFF
::::::::::::::::::::::::::::
NP_001 ALPQRMYSVLTKEDFRLAGAFSSDTSFF
970 980
>>XP_011509127 (OMIM: 600118,602536) PREDICTED: rab3 GTP (979 aa)
initn: 6559 init1: 6559 opt: 6559 Z-score: 7272.8 bits: 1357.2 E(85289): 0
Smith-Waterman score: 6559; 100.0% identity (100.0% similar) in 971 aa overlap (1-971:1-971)
10 20 30 40 50 60
pF1KA0 MAADSEPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAADSEPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KSDEISFADFKFSVTHHYLVQESTDKEGKDELLEDVVPQSMQDLLGMNNDFPPRAHCLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSDEISFADFKFSVTHHYLVQESTDKEGKDELLEDVVPQSMQDLLGMNNDFPPRAHCLVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 WYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 CQGPGVRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CQGPGVRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 QYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 DLDPIQAPHWSVRVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLDPIQAPHWSVRVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 THALSKLTEPASVPIHKLSVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THALSKLTEPASVPIHKLSVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 EKPLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKPLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 WQEFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WQEFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 ESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 LGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 LPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 ALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 AQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSKALPQRMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSKALPQRMY
910 920 930 940 950 960
970 980
pF1KA0 SVLTKEDFRLAGAFSSDTSFF
:::::::::::
XP_011 SVLTKEDFRLAVKIIDGDV
970
>>XP_011509125 (OMIM: 600118,602536) PREDICTED: rab3 GTP (1024 aa)
initn: 6559 init1: 6559 opt: 6559 Z-score: 7272.5 bits: 1357.2 E(85289): 0
Smith-Waterman score: 6559; 100.0% identity (100.0% similar) in 971 aa overlap (1-971:1-971)
10 20 30 40 50 60
pF1KA0 MAADSEPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAADSEPESEVFEITDFTTASEWERFISKVEEVLNDWKLIGNSLGKPLEKGIFTSGTWEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KA0 KSDEISFADFKFSVTHHYLVQESTDKEGKDELLEDVVPQSMQDLLGMNNDFPPRAHCLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSDEISFADFKFSVTHHYLVQESTDKEGKDELLEDVVPQSMQDLLGMNNDFPPRAHCLVR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KA0 WYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WYGLREFVVIAPAAHSDAVLSESKCNLLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KA0 CQGPGVRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CQGPGVRTDFEMVHLRKVPNQYTHLSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KA0 QYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QYFWPQQPPDIDALVGGEVGGLEFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KA0 DLDPIQAPHWSVRVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLDPIQAPHWSVRVRKAENPQCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KA0 THALSKLTEPASVPIHKLSVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 THALSKLTEPASVPIHKLSVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KA0 EKPLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EKPLDGTTSTDNNNPPSESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KA0 WQEFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WQEFVLEMRFRWENNFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASD
490 500 510 520 530 540
550 560 570 580 590 600
pF1KA0 VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VTNIYPGDAGKAGDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQ
550 560 570 580 590 600
610 620 630 640 650 660
pF1KA0 ESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESGKKGGPKEMANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAK
610 620 630 640 650 660
670 680 690 700 710 720
pF1KA0 LGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LGTSAEGAHLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVV
670 680 690 700 710 720
730 740 750 760 770 780
pF1KA0 LKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKGELSARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KA0 LPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LPCVIHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVE
790 800 810 820 830 840
850 860 870 880 890 900
pF1KA0 ALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALIARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
850 860 870 880 890 900
910 920 930 940 950 960
pF1KA0 AQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSKALPQRMY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSKALPQRMY
910 920 930 940 950 960
970 980
pF1KA0 SVLTKEDFRLAGAFSSDTSFF
:::::::::::
XP_011 SVLTKEDFRLAAPQVCPGRQLLPGAGIEANLQEKPTHSRCVEAAGRNPARIQLGCNGNNA
970 980 990 1000 1010 1020
981 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 09:06:56 2016 done: Thu Nov 3 09:06:58 2016
Total Scan time: 10.900 Total Display time: 0.130
Function used was FASTA [36.3.4 Apr, 2011]