hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/smart.HMMs.bin
Sequence file:            /tmp/20091008/iprscan-20091008-14142314/chunk_1/iprscan-20091008-14142314.nocrc
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Query sequence: pF1KB7956
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00338                                                  72.0    7.5e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00338    1/1     215   279 ..     1    65 []    72.0  7.5e-17

Alignments of top-scoring domains:
SM00338: domain 1 of 1, from 215 to 279: score 72.0, E = 7.5e-17
                   *->ekdeKrrrRrerNReAArrsReRKkayieeLedkveeLeaENesLrk
                      e+ +K++rR++rN+++A+ sR+RKk+yi+ Le +v++ +a+N++L+k
   pF1KB7956   215    ERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQK 261  

                   eleqLrreleklkselee<-*
                   ++++L+r++ +l ++l++   
   pF1KB7956   262 KVQELERHNISLVAQLRQ    279  

//