hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20080305/iprscan-20080305-21224917/chunk_1/iprscan-20080305-21224917.nocrc
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Query sequence: pF1KB5469
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01451.11.ls Low molecular weight phosphotyrosine protein   251.3    1.8e-72   1
PF01451.11.fs Low molecular weight phosphotyrosine protein   249.4    7.2e-72   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01451.11.fs   1/1       7   156 ..     1   156 []   249.4  7.2e-72
PF01451.11.ls   1/1       7   156 ..     1   156 []   251.3  1.8e-72

Alignments of top-scoring domains:
PF01451.11.fs: domain 1 of 1, from 7 to 156: score 249.4, E = 7.2e-72
                   *->mkvLFVCtGNiCRSpMAEalfrallpkkGLevkieveSAGrvdSagT
                      ++vLFVC+GNiCRSp+AEa+fr+l+++       ++ + +rvdSa+T
   pF1KB5469     7    KSVLFVCLGNICRSPIAEAVFRKLVTD------QNISENWRVDSAAT 47   

                   sgthvggsvdpravevlkehGidisghrarqlteedlksipfDliltmdg
                   sg+++g+++d+r ++++k+hGi++s h+arq+t+ed++   fD+il+md+
   pF1KB5469    48 SGYEIGNPPDYRGQSCMKRHGIPMS-HVARQITKEDFAT--FDYILCMDE 94   

                   eairlilp.laqppevrgkvkllgdwae..qkdidDPyygsidgFeevrd
                   +++r+++++++ ++ +++k++llg++++++q++i+DPyyg++++Fe+v++
   pF1KB5469    95 SNLRDLNRkSNRVKTCKAKIELLGSYDPqkQLIIEDPYYGNDSDFETVYQ 144  

                   eIeervkkllke<-*
                   ++ ++++++l++   
   pF1KB5469   145 QCVRCCRAFLEK    156  

PF01451.11.ls: domain 1 of 1, from 7 to 156: score 251.3, E = 1.8e-72
                   *->mkvLFVCtGNiCRSpMAEalfrallpkkGLevkieveSAGrvdSagT
                      ++vLFVC+GNiCRSp+AEa+fr+l+++       ++ + +rvdSa+T
   pF1KB5469     7    KSVLFVCLGNICRSPIAEAVFRKLVTD------QNISENWRVDSAAT 47   

                   sgthvggsvdpravevlkehGidisghrarqlteedlksipfDliltmdg
                   sg+++g+++d+r ++++k+hGi++s h+arq+t+ed++   fD+il+md+
   pF1KB5469    48 SGYEIGNPPDYRGQSCMKRHGIPMS-HVARQITKEDFAT--FDYILCMDE 94   

                   eairlilp.laqppevrgkvkllgdwae..qkdidDPyygsidgFeevrd
                   +++r+++++++ ++ +++k++llg++++++q++i+DPyyg++++Fe+v++
   pF1KB5469    95 SNLRDLNRkSNRVKTCKAKIELLGSYDPqkQLIIEDPYYGNDSDFETVYQ 144  

                   eIeervkkllke<-*
                   ++ ++++++l++   
   pF1KB5469   145 QCVRCCRAFLEK    156  

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