hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20090918/iprscan-20090918-21472992/chunk_1/iprscan-20090918-21472992.nocrc
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Query sequence: pF1KB3975
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       220.8    2.8e-63   1
PF00069.15.fs Protein kinase domain                       218.9    1.1e-62   1
PF07714.7.fs Protein tyrosine kinase                      19.6    1.3e-05   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1     111   431 ..     1   287 []   218.9  1.1e-62
PF07714.7.fs   1/1     111   154 ..     1    57 [.    19.6  1.3e-05
PF00069.15.ls   1/1     111   431 ..     1   287 []   220.8  2.8e-63

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 111 to 431: score 218.9, E = 1.1e-62
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      ye+ + +G+GsfG+V ka+++ t+++VA+Kiik +k+  ++ ++   
   pF1KB3975   111    YEIDSLIGKGSFGQVVKAYDHQTQELVAIKIIKNKKAFLNQAQI--- 154  

                   lsEiqilkrL.sHpN.....IvrlidvfedkdhlylVlEycegGLrvldL
                     E+++l  +++H+ + +  Iv l++ f+ ++hl+lV+E++        L
   pF1KB3975   155 --ELRLLELMnQHDTemkyyIVHLKRHFMFRNHLCLVFELLSY-----NL 197  

                   fdylsetrrkgpll.fsedeakkialQilrgleYLHs..ngiiHRDLKPe
                   +d+l+    ++ + + s +  +k a Q++ +l +L  ++ +iiH+DLKPe
   pF1KB3975   198 YDLLR----NTHFRgVSLNLTRKLAQQLCTALLFLATpeLSIIHCDLKPE 243  

                   NILld..nngvvdaflKiaDFGlAkklstsss.lttfvGTpwYmAPEvll
                   NILl ++++  +    Ki DFG++++l   +++ + +  +++Y++PEvll
   pF1KB3975   244 NILLCnpKRSAI----KIVDFGSSCQL---GQrIYQYIQSRFYRSPEVLL 286  

                   ggngygtkvDvWSlGvilyelltGkpPFsgevqds.ldqlqlirkilgpp
                    g++y+ ++D+WSlG+il e+ tG+p+Fsg+   +++dq+ +i+++lg p
   pF1KB3975   287 -GTPYDLAIDMWSLGCILVEMHTGEPLFSGS---NeVDQMNRIVEVLGIP 332  

                   lefdspewdsisrse.fr................................
                   +    ++    + ++++ ++++ + +++++ +++ +++++++ ++  + +
   pF1KB3975   333 PAAMLDQAPKARKYFeRLpgggwtlrrtkelrkdyqgpgtrrlqevlgvq 382  

                   ...........r.l.pnlseeakdLikkcLnkDPskRltaeeilqHPwf<
                   ++++++++ ++ + +p+    ++dL+ ++L++ P+ R+++  +lqH +f 
   pF1KB3975   383 tggpggrragePgHsPADYLRFQDLVLRMLEYEPAARISPLGALQHGFF  431  

                   -*
                     
   pF1KB3975     -    -    

PF07714.7.fs: domain 1 of 1, from 111 to 154: score 19.6, E = 1.3e-05
                   *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie
                       +++  +G+G+FG V+k++ +    +t+  VA+K++k+         
   pF1KB3975   111    YEIDSLIGKGSFGQVVKAYDH----QTQELVAIKIIKN--------- 144  

                   redFlrEAsi<-*
                   +++Fl+ A+i   
   pF1KB3975   145 KKAFLNQAQI    154  

PF00069.15.ls: domain 1 of 1, from 111 to 431: score 220.8, E = 2.8e-63
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      ye+ + +G+GsfG+V ka+++ t+++VA+Kiik +k+  ++ ++   
   pF1KB3975   111    YEIDSLIGKGSFGQVVKAYDHQTQELVAIKIIKNKKAFLNQAQI--- 154  

                   lsEiqilkrL.sHpN.....IvrlidvfedkdhlylVlEycegGLrvldL
                     E+++l  +++H+ + +  Iv l++ f+ ++hl+lV+E++        L
   pF1KB3975   155 --ELRLLELMnQHDTemkyyIVHLKRHFMFRNHLCLVFELLSY-----NL 197  

                   fdylsetrrkgpll.fsedeakkialQilrgleYLHs..ngiiHRDLKPe
                   +d+l+    ++ + + s +  +k a Q++ +l +L  ++ +iiH+DLKPe
   pF1KB3975   198 YDLLR----NTHFRgVSLNLTRKLAQQLCTALLFLATpeLSIIHCDLKPE 243  

                   NILld..nngvvdaflKiaDFGlAkklstsss.lttfvGTpwYmAPEvll
                   NILl ++++  +    Ki DFG++++l   +++ + +  +++Y++PEvll
   pF1KB3975   244 NILLCnpKRSAI----KIVDFGSSCQL---GQrIYQYIQSRFYRSPEVLL 286  

                   ggngygtkvDvWSlGvilyelltGkpPFsgevqds.ldqlqlirkilgpp
                    g++y+ ++D+WSlG+il e+ tG+p+Fsg+   +++dq+ +i+++lg p
   pF1KB3975   287 -GTPYDLAIDMWSLGCILVEMHTGEPLFSGS---NeVDQMNRIVEVLGIP 332  

                   lefdspewdsisrse.fr................................
                   +    ++    + ++++ ++++ + +++++ +++ +++++++ ++  + +
   pF1KB3975   333 PAAMLDQAPKARKYFeRLpgggwtlrrtkelrkdyqgpgtrrlqevlgvq 382  

                   ...........r.l.pnlseeakdLikkcLnkDPskRltaeeilqHPwf<
                   ++++++++ ++ + +p+    ++dL+ ++L++ P+ R+++  +lqH +f 
   pF1KB3975   383 tggpggrragePgHsPADYLRFQDLVLRMLEYEPAARISPLGALQHGFF  431  

                   -*
                     
   pF1KB3975     -    -    

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