hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /data/Pfam.bin
Sequence file:            /tmp/20080304/iprscan-20080304-19272960/chunk_1/iprscan-20080304-19272960.nocrc
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Query sequence: pF1KA0128
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00735.9.fs Septin                                         382.1     5e-113   1
PF00735.9.ls Septin                                         383.9   2.3e-112   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00735.9.fs   1/1      39   312 ..     1   292 []   382.1   5e-113
PF00735.9.ls   1/1      39   312 ..     1   292 []   383.9 2.3e-112

Alignments of top-scoring domains:
PF00735.9.fs: domain 1 of 1, from 39 to 312: score 382.1, E = 5e-113
                   *->kGfdFTLMVVGeSGLGKtTlINTLFltdLiranlanDsreipgpsEt
                       Gf F++++VGe GLGK+Tl+ TLF+t+   +           p+  
   pF1KA0128    39    QGFCFNILCVGETGLGKSTLMDTLFNTKFEGE-----------PAT- 73   

                   kikktveIkeatkveiEEdGvkLnLtViDTPGFGDaiDNsncWkPIveYI
                    +   v++  +++  + E +v+L+Lt++ T GFGD+i+ +++ kPIve+I
   pF1KA0128    74 HTQPGVQLQ-SNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVEFI 122  

                   deQfdqYLraEsrinRnt..kivDnRVHcCLYFIsPtGHgLkpLDvefMK
                   d Qf++YL++E +i+R + ++  D+R+H+CLYFI PtGH+Lk LD ++MK
   pF1KA0128   123 DAQFEAYLQEELKIRR-VlhTYHDSRIHVCLYFIAPTGHSLKSLDLVTMK 171  

                   kLsekVNlIPVIAKADtLTadElqefKkrIredIeaqkIkIYkFPPdeee
                   kL++kVN+IP+IAKAD   + El+ fK +I ++++  +  IY+F P+++e
   pF1KA0128   172 KLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQF-PTDDE 220  

                   deDEefketteqLkssiPFAIvGSnteiengdGekVRGRkYPWGvVEVEN
                   +     +e +  + + +PFA++GS++e  +   ++ R+R+YPWG+V VEN
   pF1KA0128   221 SV----AEINGTMNAHLPFAVIGSTEELKI-GNKMMRARQYPWGTVQVEN 265  

                   psHCDFvkLRnlLirtHLqDLkevThellYEnYRsekLsalgrkadn<-*
                   + HCDFvkLR +Lir +++DL e Th+ +YE YR+ kL+++g k  +   
   pF1KA0128   266 EAHCDFVKLREMLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTD    312  

PF00735.9.ls: domain 1 of 1, from 39 to 312: score 383.9, E = 2.3e-112
                   *->kGfdFTLMVVGeSGLGKtTlINTLFltdLiranlanDsreipgpsEt
                       Gf F++++VGe GLGK+Tl+ TLF+t+   +           p+  
   pF1KA0128    39    QGFCFNILCVGETGLGKSTLMDTLFNTKFEGE-----------PAT- 73   

                   kikktveIkeatkveiEEdGvkLnLtViDTPGFGDaiDNsncWkPIveYI
                    +   v++  +++  + E +v+L+Lt++ T GFGD+i+ +++ kPIve+I
   pF1KA0128    74 HTQPGVQLQ-SNTYDLQESNVRLKLTIVSTVGFGDQINKEDSYKPIVEFI 122  

                   deQfdqYLraEsrinRnt..kivDnRVHcCLYFIsPtGHgLkpLDvefMK
                   d Qf++YL++E +i+R + ++  D+R+H+CLYFI PtGH+Lk LD ++MK
   pF1KA0128   123 DAQFEAYLQEELKIRR-VlhTYHDSRIHVCLYFIAPTGHSLKSLDLVTMK 171  

                   kLsekVNlIPVIAKADtLTadElqefKkrIredIeaqkIkIYkFPPdeee
                   kL++kVN+IP+IAKAD   + El+ fK +I ++++  +  IY+F P+++e
   pF1KA0128   172 KLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQF-PTDDE 220  

                   deDEefketteqLkssiPFAIvGSnteiengdGekVRGRkYPWGvVEVEN
                   +     +e +  + + +PFA++GS++e  +   ++ R+R+YPWG+V VEN
   pF1KA0128   221 SV----AEINGTMNAHLPFAVIGSTEELKI-GNKMMRARQYPWGTVQVEN 265  

                   psHCDFvkLRnlLirtHLqDLkevThellYEnYRsekLsalgrkadn<-*
                   + HCDFvkLR +Lir +++DL e Th+ +YE YR+ kL+++g k  +   
   pF1KA0128   266 EAHCDFVKLREMLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTD    312  

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