GENSCAN 1.0	Date run:  6-Nov-116	Time: 19:32:49

Sequence gi568815597r:9750721_9972064 : 221344 bp : 48.19% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -    961    753  209  0  2   60   95   440 0.973  40.62
 1.07 Intr -   4589   4394  196  0  1   81   97   242 0.815  22.87
 1.06 Intr -   5790   5761   30  1  0  106   54    44 0.160   0.90
 1.05 Intr -  22674  22552  123  1  0   56   91   218 0.875  19.46
 1.04 Intr -  27247  27218   30  2  0  138   77    -2 0.554   1.80
 1.03 Intr -  41924  41836   89  1  2   54   50    97 0.002   2.11
 1.02 Intr -  42868  42769  100  2  1   75   71    58 0.001   1.97
 1.01 Init -  73013  72923   91  2  1   64   99   316 0.299  28.95
 1.00 Prom -  74895  74856   40                              -6.66

 2.03 PlyA -  75586  75581    6                               1.05
 2.02 Term -  82973  82921   53  0  2   62   54    69 0.392  -1.51
 2.01 Init -  88462  88345  118  1  1   87   90    79 0.717   8.37
 2.00 Prom -  92924  92885   40                              -1.56

 3.21 PlyA -  97576  97571    6                               1.05
 3.20 Term - 100056  99998   59  1  2  103   37    72 0.647   1.45
 3.19 Intr - 101320 101219  102  2  0   88   64    61 0.523   3.85
 3.18 Intr - 108050 107965   86  1  2   85   82    47 0.218   3.26
 3.17 Intr - 108590 108485  106  0  1   34   99    39 0.217  -1.13
 3.16 Intr - 112401 112228  174  1  0   54   99    34 0.122   1.01
 3.15 Intr - 120557 120467   91  2  1  104   96   190 0.922  20.97
 3.14 Intr - 121368 121249  120  0  0  105   92   114 0.985  14.19
 3.13 Intr - 121672 121533  140  2  2   30   72    84 0.889   1.18
 3.12 Intr - 122073 122004   70  0  1   65   75    95 0.654   4.65
 3.11 Intr - 127269 127185   85  2  1  126  110    11 0.211   6.92
 3.10 Intr - 133018 132985   34  2  1  104   92    25 0.221   1.78
 3.09 Intr - 138977 138859  119  1  2   65   36    66 0.020  -0.79
 3.08 Intr - 142344 142289   56  0  2  106   98    24 0.021   2.98
 3.07 Intr - 159469 159375   95  2  2   82  115    59 0.504   7.68
 3.06 Intr - 181252 181171   82  1  1   56   97    80 0.981   4.91
 3.05 Intr - 184140 184042   99  0  0  103   83    67 0.990   8.01
 3.04 Intr - 184907 184772  136  1  1   57  119   124 0.804  12.97
 3.03 Intr - 192841 192629  213  0  0   60   96   181 0.830  13.93
 3.02 Intr - 201749 201681   69  1  0  136   38    93 0.580   7.40
 3.01 Intr - 210089 209994   96  1  0  115   87    22 0.655   3.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  35616  35635   20  2  2   72  100    51 0.823   4.21
S.002 Intr +  41634  41743  110  0  2   65   94    97 0.897   7.93
S.003 Term - 171638 171535  104  0  2   85   42   101 0.887   3.64


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:9750721_9972064|GENSCAN_predicted_peptide_1|290_aa
MLRRPAPALAPAARLLLAGLLCGGGVWAARESFRMASIHEPSVRPLFSVGECIKLFHSKP
VSARDTVAKGMVPDTRHPWLESVSLVINTLQDGCVGTEGQSEVVNKHKPWLEPTYHGIVT
ENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGE
GVIRSKEKLDCELQKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEK
SYKATVIEGKQYDSILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDX

>gi568815597r:9750721_9972064|GENSCAN_predicted_CDS_1|870_bp
atgctgcgccgccccgctcccgcgctggccccggccgcccggctgctgctggccgggctg
ctgtgcggcggcggggtctgggccgcgcgagaaagctttcgaatggcctccattcatgaa
ccttctgtgaggccattgttctctgttggggagtgcatcaaattgttccacagcaaacct
gtcagcgccagggataccgtagccaagggcatggttcccgacacccgacacccgtggctg
gagtctgtgtccctggtaattaataccctacaggatggctgtgttggaacagagggacag
agcgaggttgttaacaagcacaagccctggctggagcccacctaccacggcatagtcaca
gagaacgacaacaccgtgctcctcgaccccccactgatcgcgctggataaagatgcgcct
ctgcgatttgcagagagttttgaggtgacagtcaccaaagaaggtgagatttgtggattt
aaaattcacgggcagaatgtcccctttgatgcagtggtagtggataaatccactggtgag
ggagtcattcgctccaaagagaaactggactgtgagctgcagaaagactattcattcacc
atccaggcctatgattgtgggaagggacctgatggcaccaacgtgaaaaagtctcataaa
gcaactgttcatattcaggtgaacgacgtgaatgagtacgcgcccgtgttcaaggagaag
tcctacaaagccacggtcatcgaggggaagcagtacgacagcattttgagggtggaggcc
gtggatgccgactgctcccctcagttcagccagatttgcagctacgaaatcatcactcca
gacgtgccctttactgttgacaaagatgnn

>gi568815597r:9750721_9972064|GENSCAN_predicted_peptide_2|56_aa
MPKSSYYGSRSLIVTSRQTATRGPTPASVSHLADTACDRGSFKVKEKAPKSQRSLI

>gi568815597r:9750721_9972064|GENSCAN_predicted_CDS_2|171_bp
atgccgaagagcagttactatggcagccgatctctcatcgtgacttctagacagacagca
acgcggggccccacccctgcttccgtgtcccacctggcagacactgcctgcgacagaggg
agcttcaaggtcaaggaaaaagcaccaaaaagccagagaagcctcatctga

>gi568815597r:9750721_9972064|GENSCAN_predicted_peptide_3|677_aa
XCSGPSVTMIHFCLAHTAYRLHCWLLRTHQLRLFYCAVCSDGAIATGTEVDVFCIWTKSD
QFLRGSLRGAYRALTVRRPECYRRSPAARTPASGTSRSHSHWFQGAGSACVQRKCSPGAV
RQASALREELDTDEYEETKKETLEQLSEFNDSLKKIMSGNMTLVDELSGMQLAIQAAISQ
AFKTPEVIRLFAKKQPGQLRTRLAELTADDEAFLSANAGAILSQFEKVSTDLAAARAEHA
PEQAAARCAPDPLPLPARPGRAAQTGQGLVTHQEFLSRYRFPQASSLVVNISQISRYSVG
AVMREEEMQADVQTQASRQPREGTDRLDNGDSTGAAPSYFCPATALPSQLSTCLPEVNFQ
KQVRSLLHVDTLLAFPAACRSYPLTGRNNQQSRSSQFSWTQQLHAQRQQAGQPLQRLLEN
RAAQFSLLGPAWESPEPGRGMNREGAPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEF
LRTYAGVVNSQLSQLPPHSIDQGRVALTPAAYSAPGCGSREGRFDPITPRHGFCCLELRT
DARMASEKSLWDSTLPPSSPGAKLALGIGWEGLLDTLSWFRKLRLCQCPGPGFQGRYLPR
YCDYVSEQNKVPDDMRCTFQWRKEERIPAVAQTTCQKDHGQPDWYFSGQSEDLAFYKGGA
EDVVMAFSRSETEDRRQ

>gi568815597r:9750721_9972064|GENSCAN_predicted_CDS_3|2034_bp
nngtgctctgggcccagtgtcaccatgattcacttttgtttggcccacacggcctatcgc
ttgcactgctggctgctgagaactcaccagctcaggctgttttactgtgcagtttgttca
gatggagccattgccacgggcactgaagtggatgtcttctgcatttggacaaaaagcgac
cagtttctcaggggctccttgcggggagcttaccgcgccctcactgtccgccggcccgag
tgctaccggagatcaccagcggcccggacgccagcgagtggaacatctcggtcgcactct
cattggttccagggggccggaagtgcgtgcgtccagcggaagtgctcccccggcgcggtc
cgccaggccagtgccctcagagaggaacttgatacagatgaatatgaagaaaccaaaaag
gaaactctggagcaactaagtgaatttaatgattcactaaagaaaattatgtctggaaat
atgactttggtagatgaactaagtggaatgcagctggctattcaggcagctatcagccag
gcctttaaaaccccagaggtcatcagattgtttgcaaagaaacaaccaggtcagcttcgg
acaaggttagcagagctgactgcagatgatgaggccttcttgtcagcaaatgcaggtgct
atactcagccagtttgagaaagtctctacagaccttgcggctgctcgggctgagcacgcc
ccggaacaggccgccgcgcgctgcgcgccggacccgctgcccctgccggcccggccgggt
cgggcggcccagactggacaaggccttgtgacccatcaggagtttttgtcccgataccgt
ttcccacaagcttccagtctggtggtgaacatttctcagatatccaggtacagtgttggg
gcggtgatgcgagaagaggaaatgcaggcggatgtgcagacacaggcctcgaggcagccc
agagaagggaccgacagacttgacaacggtgacagcactggggcggcaccttcctacttc
tgcccagccacagccctcccctcacagttgagcacctgtttgcctgaagttaatttccag
aagcaggttaggtccctgctgcatgtggacacgctgctggccttcccagctgcctgcagg
agctaccctctgacaggtagaaacaaccagcagtccaggtcatctcagttttcctggacg
cagcagcttcatgcacagaggcagcaggcaggccagcccttgcagcgcctgctggagaac
agagctgctcagttcagcctgctgggaccagcatgggagtccccagagccaggcaggggg
atgaaccgcgagggagctcccgggaagagtccggaggagatgtacattcagcagaaggtc
cgagtgctgctcatgctgcggaagatgggatcaaacctgacagccagcgaggaggagttc
ctgcgcacctatgcaggggtggtcaacagccagctcagccagctgcctccgcactccatc
gaccaggggagggtcgctttgaccccagctgcttactcagcacctggctgcggctccagg
gagggtcgctttgaccccatcaccccgcgtcatgggttctgttgtttagaactgagaaca
gatgcccgaatggcctcagagaagtccttgtgggactctacacttcccccctcaagccct
ggggcaaagctggcattgggcataggatgggagggcctgctggataccctgtcctggttt
agaaagctgcgcctttgccagtgtcctggccctggtttccagggcaggtacttgcccaga
tactgtgactatgtcagtgaacaaaacaaagtccctgatgacatgagatgtacgttccag
tggagaaaggaagagagaatacctgcagtagcacagacaacatgtcagaaagaccatggg
cagccagactggtacttttcggggcaaagtgaagatctggccttttacaaagggggtgca
gaggacgtggtgatggcgttttccaggtcggagacggaagaccggaggcagtag