GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:32:51

Sequence gi568815597r:67313210_67530300 : 217091 bp : 42.01% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8393   8680  288  0  0   77   77   123 0.210   6.39
 1.02 Intr +  13526  13640  115  0  1   58   79    53 0.237  -0.01
 1.03 Intr +  14991  15175  185  0  2   96   56   108 0.246   6.91
 1.04 Intr +  25415  25494   80  0  2   66  113    54 0.073   4.05
 1.05 Intr +  37661  37880  220  1  1   76  111   209 0.873  18.95
 1.06 Intr +  54616  54816  201  2  0   56   82   186 0.718  13.14
 1.07 Intr +  59227  59325   99  2  0   92  113    89 0.997  10.96
 1.08 Intr +  66777  66914  138  1  0  124  100    79 0.696  12.21
 1.09 Intr +  73370  73460   91  0  1  109   87    68 0.007   6.93
 1.10 Intr +  76820  76919  100  2  1   75   94    71 0.042   5.59
 1.11 Term +  82338  82880  543  2  0  105   48   393 0.589  30.28
 1.12 PlyA +  83772  83777    6                              -0.45

 2.09 PlyA -  83972  83967    6                               1.05
 2.08 Term -  84494  84190  305  0  2   65   53   116 0.244   0.15
 2.07 Intr -  85480  85396   85  1  1   73  106    42 0.205   2.97
 2.06 Intr - 102130 101957  174  1  0   72   86   153 0.926  12.71
 2.05 Intr - 106977 106800  178  2  1   50   83   207 0.998  15.40
 2.04 Intr - 111113 110991  123  1  0   91   97   125 0.996  12.48
 2.03 Intr - 112014 111874  141  2  0   42   97   233 0.999  18.15
 2.02 Intr - 113076 112926  151  1  1   79   97   233 0.988  21.60
 2.01 Init - 117280 116608  673  1  1   76   13   685 0.902  53.19
 2.00 Prom - 145402 145363   40                              -4.55

 3.07 PlyA - 145894 145889    6                               1.05
 3.06 Term - 148315 148164  152  2  2   51   39   234 0.705  11.89
 3.05 Intr - 150602 150480  123  0  0   39   -6   199 0.966   5.24
 3.04 Intr - 151061 150915  147  0  0   21  110   149 0.986   9.69
 3.03 Intr - 152588 152355  234  0  0   88   67    73 0.447   1.94
 3.02 Intr - 155235 155055  181  0  1   -9   44   173 0.700   1.72
 3.01 Init - 155472 155443   30  0  0   45   88    70 0.808   2.62
 3.00 Prom - 156836 156797   40                              -9.95

 4.00 Prom + 156880 156919   40                              -1.75
 4.01 Init + 162777 162889  113  2  2   53  110    25 0.652   0.93
 4.02 Intr + 165982 166144  163  1  1   77   78   129 0.883   9.86
 4.03 Intr + 171388 171482   95  0  2   61   44    42 0.268  -5.06
 4.04 Intr + 172063 172107   45  1  0  121  105    -4 0.262   1.21
 4.05 Intr + 174815 174938  124  2  1   61   45   145 0.056   7.17
 4.06 Term + 181626 181769  144  2  0   37   42   148 0.859   2.03
 4.07 PlyA + 182361 182366    6                               1.05

 5.04 PlyA - 183827 183822    6                               1.05
 5.03 Term - 198464 198396   69  2  0   84   36   135 0.725   4.86
 5.02 Intr - 210500 210340  161  0  2   66   42    96 0.221   1.59
 5.01 Init - 211955 211898   58  2  1   87   68    32 0.180   2.63

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  70838  70666  173  0  2   29   53   151 0.838   2.71
S.002 Intr -  71666  71356  311  1  2   17   63   256 0.836  11.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:67313210_67530300|GENSCAN_predicted_peptide_1|686_aa
XACKRGDVTVKPSHVILLGSTVNITCSLKPRQGCFHYSRRNKLILYKFDRRINFHHGHSL
NSQVTGLPLGTTLFVCKLACINSDEIQICGAEIFVGVAPEQPQNLSCIQKGEQGTVACTW
ERGRDTHLYTEYTLQLSGPKNLTWQKQCKDIYCDYLDFGINLTPESPESNFTAKVTAVNS
LGSSSSLPSTFTFLDIEPTGMLDVWYMKRHIDYSRQQISLFWKNLSVSEARGKILHYQVT
LQELTGGKAMTQNITGHTSWTTVIPRTGNWAVAVSAANSKGSSLPTRINIMNLCEAGLLA
PRQVSANSEGMDNILVTWQPPRKDPSAVQEYVVEWRELHPGGDTQVPLNWLRSRPYNVSA
LISENIKSYICYEIRVYALSGDQGGCSSILGNSKHKEIPYRVSQNSHPINSLQPRVTYVL
WMTALTAAGESSHGNEREFCLQGKANWMAFVAPSICIAIIMVGIFSTHYFQQKVFVLLAA
LRPQWCSREIPDPANSTCAKKYPIAEEKTQLPLDRLLIDWPTPEDPEPLVISEVLHQVTP
VFRHPPCSNWPQREKGIQGHQASEKDMMHSASSPPPPRALQAESRQLVDLYKVLESRGSD
PKPENPACPWTVLPAGDLPTHDGYLPSNIDDLPSHEAPLADSLEELEPQHISLSVFPSSS
LHPLTFSCGDKLTLDQLKMRCDSLML

>gi568815597r:67313210_67530300|GENSCAN_predicted_CDS_1|2061_bp
natgcgtgcaagagaggcgatgtgactgtgaagccttcccatgtaattttacttggatcc
actgtcaatattacatgctctttgaagcccagacaaggctgctttcactattccagacgt
aacaagttaatcctgtacaagtttgacagaagaatcaattttcaccatggccactccctc
aattctcaagtcacaggtcttccccttggtacaaccttgtttgtctgcaaactggcctgt
atcaatagtgatgaaattcaaatatgtggagcagagatcttcgttggtgttgctccagaa
cagcctcaaaatttatcctgcatacagaagggagaacaggggactgtggcctgcacctgg
gaaagaggacgagacacccacttatacactgagtatactctacagctaagtggaccaaaa
aatttaacctggcagaagcaatgtaaagacatttattgtgactatttggactttggaatc
aacctcacccctgaatcacctgaatccaatttcacagccaaggttactgctgtcaatagt
cttggaagctcctcttcacttccatccacattcacattcttggacatagagcctactggg
atgttagatgtctggtacatgaaacggcacattgactacagtagacaacagatttctctt
ttctggaagaatctgagtgtctcagaggcaagaggaaaaattctccactatcaggtgacc
ttgcaggagctgacaggagggaaagccatgacacagaacatcacaggacacacctcctgg
accacagtcattcctagaaccggaaattgggctgtggctgtgtctgcagcaaattcaaaa
ggcagttctctgcccactcgtattaacataatgaacctgtgtgaggcagggttgctggct
cctcgccaggtctctgcaaactcagagggcatggacaacattctggtgacttggcagcct
cccaggaaagatccctctgctgttcaggagtacgtggtggaatggagagagctccatcca
gggggtgacacacaggtccctctaaactggctacggagtcgaccctacaatgtgtctgct
ctgatttcagagaacataaaatcctacatctgttatgaaatccgtgtgtatgcactctca
ggggatcaaggaggatgcagctccatcctgggtaactctaagcacaaagaaattccctac
agagtctcccaaaattcacatccaataaacagcctgcagccccgagtgacatatgtcctg
tggatgacagctctgacagctgctggtgaaagttcccacggaaatgagagggaattttgt
ctgcaaggtaaagccaattggatggcgtttgtggcaccaagcatttgcattgctatcatc
atggtgggcattttctcaacgcattacttccagcaaaaggtgtttgttctcctagcagcc
ctcagacctcagtggtgtagcagagaaattccagatccagcaaatagcacttgcgctaag
aaatatcccattgcagaggagaagacacagctgcccttggacaggctcctgatagactgg
cccacgcctgaagatcctgaaccgctggtcatcagtgaagtccttcatcaagtgacccca
gttttcagacatcccccctgctccaactggccacaaagggaaaaaggaatccaaggtcat
caggcctctgagaaagacatgatgcacagtgcctcaagcccaccacctccaagagctctc
caagctgagagcagacaactggtggatctgtacaaggtgctggagagcaggggctccgac
ccaaagcccgaaaacccagcctgtccctggacggtgctcccagcaggtgaccttcccacc
catgatggctacttaccctccaacatagatgacctcccctcacatgaggcacctctcgct
gactctctggaagaactggagcctcagcacatctccctttctgttttcccctcaagttct
cttcacccactcaccttctcctgtggtgataagctgactctggatcagttaaagatgagg
tgtgactccctcatgctctga

>gi568815597r:67313210_67530300|GENSCAN_predicted_peptide_2|609_aa
MTLAYIPHSALRRRPLPDVCLAPEEKTAPLSRPGHLVGRAEAGALGSARPAAIRGGTRRR
ATIMPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGGGVGGPGAKSAAQA
AAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALKKEGKAGAECGGDWDG
GKERGGCRLPLVSGAPRVRGRLCRLYPHVSSRDKSPVLRRCQERGIRRVGRRPDQQLQGE
GKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDRPIRGRGGLGRGRGGRGRGMG
RGDGFDSRGKREFDRHSGSDRSESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADT
ENKENEVEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKS
EEAHAEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRPNRGSRTDK
LLWTRHDAGAGETLPKFLLSSCLQSNRERKSIISSLDQDFSTSLAEVPMVKRQRQQWARE
GGKPGATALKSKTWIMFQVHVVEKRVIFQAQLELAEDQLNIFSGNESCAFGNRGQTTSED
NLRGWGLRP

>gi568815597r:67313210_67530300|GENSCAN_predicted_CDS_2|1830_bp
atgactctggcctacataccccacagtgccttgcggcgcaggccgctcccggatgtgtgc
ctggcgccggaagagaagacggcccccctctctcggcccggccatcttgtgggaagagct
gaagcaggcgctcttggctcggcgcggcccgctgcaatccgtggaggaacgcgccgccga
gccaccatcatgcctgggcacttacaggaaggcttcggctgcgtggtcaccaaccgattc
gaccagttatttgacgacgaatcggaccccttcgaggtgctgaaggcagcagagaacaag
aaaaaagaagccggcgggggcggcgttgggggccctggggccaagagcgcagctcaggcc
gcggcccagaccaactccaacgcggcaggcaaacagctgcgcaaggagtcccagaaagac
cgcaagaacccgctgccccccagcgttggcgtggttgacaagaaagaggagacgcagccg
cccgtggcgcttaagaaagaaggtaaagcaggggcagaatgtgggggagactgggatgga
gggaaggagcgagggggctgccggctgccacttgtttctggagctccgagggtccgcggg
agactttgccgcctatatcctcacgtttcttcacgcgacaaaagtccggtcctgcgaagg
tgccaggagcgtggaataagacgagttggaagaagacctgatcaacaacttcagggtgaa
gggaaaataattgatagaagaccagaaaggcgaccacctcgtgaacgaagattcgaaaag
ccacttgaagaaaagggtgaaggaggcgaattttcagttgatagaccgattattgaccga
cctattcgaggtcgtggtggtcttggaagaggtcgagggggccgtggacgtggaatgggc
cgaggagatggatttgattctcgtggcaaacgtgaatttgataggcatagtggaagtgat
agatcagagtcccccaaatacattcagaaacaaatatcttataattacagtgacttggat
caatcaaatgtgactgaggaaacacctgaaggtgaagaacatcatccagtggcagacact
gaaaataaggagaatgaagttgaagaggtaaaagaggagggtccaaaagagatgactttg
gatgagtggaaggctattcaaaataaggaccgggcaaaagtagaatttaatatccgaaaa
ccaaatgaaggtgctgatgggcagtggaagaagggatttgttcttcataaatcaaagagt
gaagaggctcatgctgaagattcggttatggaccatcatttccggaagccagcaaatgat
ataacgtctcagctggagatcaattttggagaccttggccgcccaggacgtggcggcagg
ggaggacgaggtggacgtgggcgtggtgggcgcccaaaccgtggcagcaggaccgacaag
ctactatggaccaggcatgatgctggtgctggggaaacactgccaaagttcctgctttca
agttgtctgcagtccaacagagaaaggaagagcattattagcagtttagaccaagacttc
tccactagtttggcagaagtgcctatggtgaagagacagaggcagcaatgggctagggag
ggtggcaagccaggggccacagctttaaagagcaaaacatggatcatgttccaagtccat
gttgtggaaaagagagttatcttccaggctcaacttgagctggcagaggaccagctcaat
atcttctccgggaatgaaagctgtgcctttgggaacaggggacagaccacttctgaggac
aacctcagaggttggggtcttagaccctga

>gi568815597r:67313210_67530300|GENSCAN_predicted_peptide_3|288_aa
MGLQIRVQSQEARAAAAWGAKTSPWAALTQLSLPSPLHAVQMKSGENESGHQGAGGIEGP
EGHLAAWGEGGGPLKLLVGIEAPRAGWVGMMYTCVFPYWLLKKPVFTCFHHQLRAYYNPF
NFLVILVQGLKHPERQSLEMIVIPGLVPYDWVDEVSFTKIEITGKKVPEGGQKLVCGYVD
EDIHLEPVELEVTVGHPACRCQCNWIKLICNEKQLAVVSCTYGAWLREAVPDSVALLRAT
HLTAEANTSCGLIPESPQAVIAEKLSQEETDSQPKATRSGPLSLQALG

>gi568815597r:67313210_67530300|GENSCAN_predicted_CDS_3|867_bp
atgggcctgcagatccgagtgcagagccaggaagccagggcagcagctgcctggggtgca
aagacatctccgtgggctgccctgacccagttgtcccttccctcacccctacatgctgtc
cagatgaaatccggtgaaaatgagtcaggacaccaaggagcagggggaatagagggccca
gagggacatttggcagcctggggagagggtggtgggcctctaaagctgttggtggggata
gaggctccccgagcagggtgggttgggatgatgtacacctgtgttttcccttattggctg
ctcaagaagccagtgtttacctgttttcatcatcaactcagggcttactataatcccttc
aattttttagtcattcttgttcaaggtctcaagcatccggagaggcagtccttggaaatg
attgtcattcctggcctggttccctatgactgggtggatgaagtgtcattcactaagata
gagatcactggaaagaaagtaccagaaggagggcagaagctggtttgtggatatgtggat
gaggacatccacctggaacctgttgagttagaggtgacagtgggacatccagcctgtcgc
tgtcagtgcaattggatcaagctgatttgcaatgaaaagcagctggcagttgtgtcgtgt
acctatggagcttggctgcgggaagcagttccagattccgtggctctgctcagagcaact
catttgaccgcagaagcaaacacaagctgtggcctaatcccagagtccccacaagcagta
attgcagagaagttgagccaagaggagactgactcgcagcccaaagctacccgctcaggt
cccctgagcctgcaggctttgggctaa

>gi568815597r:67313210_67530300|GENSCAN_predicted_peptide_4|227_aa
MFWKKPNLSLCRFSQWRNFPSVRCRVMKAREPKMRWVRPIKENDSESPEQVKPGNHVLPS
GSLTPWRGGAVHCHRDSNSESGVREAYVPTGAGSVGVEGFGGEHIQTANLLPAPNRVSVF
FLARNEDFGAPKLVHFKNPGIQEQDLVFEVPPLEIAFPGAASFKLYKAYDIIWNQSGKVM
NPSSRCICGRVKVRVELNGNKGGVTQVTCVASVGLANAEPALTMAAA

>gi568815597r:67313210_67530300|GENSCAN_predicted_CDS_4|684_bp
atgttttggaaaaaacccaacttaagcctttgcaggttttcacagtggaggaactttcca
tcagtacgctgcagggtgatgaaggctagggagccaaaaatgagatgggtcagacccata
aaagaaaatgattcagaaagtcctgagcaagtaaaacctggaaaccacgtgcttccatct
ggtagcctcacaccgtggaggggaggggcagtccactgccaccgggactccaacagtgag
agtggagtgagggaggcctatgtccccactggagccggctctgtgggggtggagggtttt
ggaggagaacacattcaaacagcaaacttgctccctgcccccaaccgtgtttcagtattt
ttcttggcaaggaatgaagacttcggagctccaaagctagtgcattttaaaaacccaggt
atccaagaacaggacctcgtcttcgaggtaccaccactagagatagccttcccaggggct
gccagctttaaactctacaaagcctatgacatcatttggaatcaaagtggaaaagtcatg
aacccatcatccagatgtatttgcggaagagtcaaagttagagtcgagttaaatgggaat
aaaggtggagtcacccaggtcacctgtgttgctagtgtaggtctggccaatgcagaacca
gcactgacaatggcagctgcctga

>gi568815597r:67313210_67530300|GENSCAN_predicted_peptide_5|95_aa
MAREYCKEMVRCMWLWLEAELISGVNSGDQSCWPCKKTLPGGAVPAGDHFTNKCSASLTV
GIMVLRTEKQPCASTQGEDNKDEDLYDDTLKLTEQ

>gi568815597r:67313210_67530300|GENSCAN_predicted_CDS_5|288_bp
atggccagggagtactgcaaggaaatggtgaggtgcatgtggctgtggctagaggcagaa
ctgatcagtggggtaaacagtggtgaccagtcttgctggccctgcaaaaagacgctgcct
ggtggagctgttcctgcaggtgaccacttcaccaacaagtgtagtgcttctctaacagtg
ggcataatggtcttaagaacagaaaagcagccgtgtgcatctactcaaggtgaagacaac
aaggatgaagacctttatgatgatacacttaaacttactgagcagtaa