GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:51:00

Sequence gi568815597r:61583439_61825306 : 241868 bp : 41.11% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    806    889   84  1  0   86   80    58 0.887   5.67
 1.02 Term +   8563   8727  165  0  0  111   32   113 0.499   4.93
 1.03 PlyA +  10311  10316    6                               1.05

 2.10 PlyA -  11134  11129    6                               1.05
 2.09 Term -  24398  24256  143  0  2   85   43    83 0.339   0.61
 2.08 Intr -  27053  26904  150  0  0   85   84    45 0.547   3.01
 2.07 Intr -  28567  28411  157  1  1   34   47   100 0.586  -0.84
 2.06 Intr -  29492  29280  213  2  0   72   56   154 0.774   8.59
 2.05 Intr -  49881  49752  130  2  1  104   17    83 0.007   2.58
 2.04 Intr -  59407  59268  140  1  2   46   94    89 0.005   3.64
 2.03 Intr -  69126  69083   44  1  2   56   72    21 0.004  -5.66
 2.02 Intr -  71281  70887  395  0  2   99   46   430 0.510  33.27
 2.01 Init -  71722  71652   71  1  2   75   95    22 0.647   2.17
 2.00 Prom -  75043  75004   40                              -7.35

 3.00 Prom +  77685  77724   40                              -3.35
 3.01 Init +  86797  86894   98  0  2   89   78    38 0.303   2.73
 3.02 Intr +  97244  97460  217  2  1   64   94   108 0.545   6.58
 3.03 Term + 142006 142158  153  0  0   78   42   189 0.156  10.24
 3.04 PlyA + 143470 143475    6                               1.05

 4.00 Prom + 153052 153091   40                              -2.05
 4.01 Init + 159317 159392   76  1  1   88   27   124 0.555   5.60
 4.02 Intr + 179575 179741  167  2  2   42  108   133 0.874   9.46
 4.03 Intr + 182841 183035  195  2  0   96  103    79 0.997   8.89
 4.04 Intr + 185845 185984  140  0  2   75   94   134 0.999  11.04
 4.05 Intr + 187993 188188  196  1  1   19   79   115 0.994   2.20
 4.06 Intr + 191768 191896  129  1  0   82   91   120 0.998  11.67
 4.07 Intr + 204316 204534  219  0  0   56   65   179 0.952   9.98
 4.08 Intr + 207910 208009  100  0  1  107   99    32 0.939   4.96
 4.09 Intr + 212029 212120   92  2  2   49   87    43 0.927  -0.91
 4.10 Intr + 213849 213990  142  2  1  106   45   168 0.999  13.31
 4.11 Intr + 218185 218331  147  2  0   92   57   138 0.978  10.39
 4.12 Intr + 222010 222086   77  2  2   93   80    63 0.836   4.32
 4.13 Intr + 225036 225092   57  2  0   33  121    44 0.463   0.36
 4.14 Intr + 239507 239641  135  1  0   97   83   143 0.589  14.54

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  40481  40653  173  0  2   82   39   188 0.940  10.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:61583439_61825306|GENSCAN_predicted_peptide_1|82_aa
MKVCASGAQEAVKGQELMFINIERLMCWPHLHSHLQRYQMPPVLRCFTALNVNRVAFGVS
HCRLRVQFDGVWQAGRQSSTAF

>gi568815597r:61583439_61825306|GENSCAN_predicted_CDS_1|249_bp
atgaaggtctgtgctagtggagctcaggaagcagtgaagggacaagagctaatgtttatc
aacattgaaaggctcatgtgctggccccatcttcactctcacctccagaggtaccagatg
ccaccagtcctgcgctgtttcactgctctgaatgtgaaccgagttgcttttggcgtttcc
cactgcaggctccgtgtgcagtttgatggggtctggcaggccggtcgccagtcttccaca
gcattttaa

>gi568815597r:61583439_61825306|GENSCAN_predicted_peptide_2|480_aa
MNTHNLSPKPPHNPGCHIQTLDNWTWGLIRHPHIRFLRRQDLNRMLPAAFPAQHSAQPLK
GCRAQRVEMLTTVLLRPGLVGKAFETLQVRQREHGGQVQRPVFVHLSGVTQVHEAFGHIP
RRARVVDEEQLLQLLGPGELTQGPKQRAASQPRRPGNNNNNKNRCCTDIPALGNEFISLA
TIGISSRQRLIFGVEQHEQRLWPRAEAGAEAQGQANRCLYSDYSLGVICPVSSSVLHTLS
AMILLDMLHPGPAGELSRAWENRNNEEETVESLPEPQVLQSQRALATCAQDHCQCCVLSA
VRLCGFSADGNTSHQRGNEMPGHSSQLLGSLRWCRYGKNSSKMQLWLQPQFQLAPPKPVA
LFPLCRTCTGQSRPFLRSEHQPVESLLLENWPPVQLVSLSLKTDSSPEIGQEIVTLFRVS
ALSLLSSVLDLFGDVKFKAQSWDGSLILNHGFMQSGSENTARIPSAVDGISCKWDLSSGD

>gi568815597r:61583439_61825306|GENSCAN_predicted_CDS_2|1443_bp
atgaatacccataacctctctcctaagcctcctcataatccagggtgccacatccagact
ctcgacaactggacctggggcctaattcggcaccctcacattaggttcctccgacgccag
gacctcaacagaatgttaccagcagcctttcccgcacagcacagcgctcagcctttgaag
ggctgcagggcacagagggttgagatgttaaccacagttctgttgaggccaggactggtt
ggtaaggccttcgagacgctgcaagtccggcagagagagcatggaggtcaagttcagcgc
ccagtctttgttcacttgagtggagtcacccaggtccacgaagcctttggacacatcccc
aggagagcccgcgttgttgatgaagagcagttgctgcagctcctcggtcctggggagctg
acgcaaggccccaagcagcgggctgcaagccagcctcggcgcccaggaaacaataataac
aacaaaaaccgttgttgtacagatattccagctttaggaaatgaattcataagtttagca
accattggcattagctccaggcagcgtttgatttttggagtagagcagcatgagcagagg
ctgtggcccagagcagaagctggggcagaagcccagggacaggccaacaggtgcctgtat
tctgattattctcttggagttatctgtccagtgtcctcatctgttttacacactttgagt
gccatgattctgctagatatgctgcatcccggaccagctggagagttgtcacgtgcttgg
gaaaatcgtaataacgaggaagagactgtggagagccttcctgaaccccaggttctgcaa
tcacaaagagcactggccacatgtgctcaggaccattgccaatgctgtgttctctctgct
gtcaggctctgtggcttctctgcagatggcaataccagccaccaaagaggaaatgaaatg
cctggtcatagctcacaactgctgggctccctgcgttggtgtcgctacggcaaaaacagc
agcaaaatgcagctatggcttcagccccagtttcagttggcaccccccaaaccagttgca
ctattccctctttgcagaacctgcaccggccagtcacgccctttcctgaggtctgagcac
cagcctgtagagtcccttctcctggagaactggcctccagttcagctagtgagtctgagt
ttgaaaacagattcaagtccagaaattggacaagagattgtgacattgtttagagtatct
gccctcagcctcctgtcatctgtccttgatttatttggagacgtgaaatttaaggcacaa
tcatgggatggcagtctgattcttaaccatggcttcatgcaatctgggagtgaaaacact
gcacggattccctcagctgtagatggaatcagttgtaaatgggatctgtcctcaggcgat
tag

>gi568815597r:61583439_61825306|GENSCAN_predicted_peptide_3|155_aa
MEAAGGHYPKCINTGTENQIPHVLTYEWELNFSFKYNCGELDESASGLPKASVALPKQKR
KKFTPQRPESMPEVYMLPQSFTDSLMIFSSLDTKAKTDLKAAEKQLRLLGPLKVPAASEV
GINAFLTSSQLALIGFGFTDKEQGSKTLKHTDLNH

>gi568815597r:61583439_61825306|GENSCAN_predicted_CDS_3|468_bp
atggaagcagctggaggccattatcctaagtgcattaacacaggaacagaaaatcaaata
ccacatgttctcacttatgagtgggagctaaacttcagcttcaaatataactgcggtgag
ctagatgagtcagcatctggtcttccaaaagctagtgtagcactcccaaagcaaaaaagg
aagaagttcacacctcagaggcctgaatcaatgccagaagtgtacatgttgcctcaaagt
ttcacagactccctaatgatctttagctccctggataccaaggcaaagacagatctgaaa
gctgcagaaaaacagctgaggcttctcggtcctctgaaagtgccagcggcgtcagaggtt
ggaatcaatgctttcctgacatcatcgcagttagccctgataggttttgggtttacagat
aaggaacaaggctcaaagacgctgaaacacactgaccttaatcactaa

>gi568815597r:61583439_61825306|GENSCAN_predicted_peptide_4|624_aa
MGRPRRASALTREAGRGRRPPASGPDKLQVLQVLDRLKMKLQEKGDTSQNEKLSMFYETL
KSPLFNQILTLQQSIKQLKGQLNHIPSDCSANFDFSRKGLLVFTDGSITNGNVHRPSNNS
TVSGLFPWTPKLGNEDFNSVIQQMAQGRQIEYIDIERPSTGGLGFSVVALRSQNLGKVDI
FVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLRLIVAREPV
HTKSSTSSSLNDTTLPETVCWGHVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLAD
RDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPAGDISVTPPAPAAL
PVALPTVASKGPGSDSSLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSIIP
GSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNAGQVVHLTLVRRKTSSSTSPLE
PPSDRGTVVEPLKPPALFLTGAVETETNVDGEDEEIKERIDTLKNDNIQALEKLEKVPDS
PENELKSRWENLLGPDYEVMVATLDTQIADDAELQKYSKLLPIHTLRLGVEVDSFDGHHY
ISSIVSGGPVDTLGLLQPEDELLE

>gi568815597r:61583439_61825306|GENSCAN_predicted_CDS_4|1872_bp
atggggcgcccgcggcgtgcgtccgcgctgacccgggaggcggggcgggggcgccgtcct
cctgcgtcgggcccggataaactgcaggtgctgcaggtacttgatcgcctgaaaatgaaa
ttgcaggagaagggtgacacgtcgcagaatgagaagttatctatgttttatgagacacta
aagagtcctctcttcaaccagatactcacacttcagcagtccatcaagcaactgaagggt
caactcaaccatataccctcagattgttcagccaactttgatttttctaggaaaggtttg
ttagtgttcacagatggttccatcactaatggaaatgtccacaggccctctaataactcg
actgtatctgggttatttccgtggaccccgaagttgggaaatgaagactttaactcagtc
attcaacagatggctcagggccggcaaattgaatatatagatatagaacggccttcaact
ggaggccttggattcagtgtggtggccctcagaagtcaaaatctcggaaaagttgatatc
ttcgtgaaggatgtccagccagggagtgtagcagacagggatcaaagattaaaggaaaat
gatcaaatattggccattaatcacacgccattggatcagaacatttcccatcagcaagca
attgcattattacaacaaaccactggatctttgagactgattgtggccagggaaccagtc
cacacaaaaagcagtacttctagcagcctaaatgatacaactctgcctgaaacagtttgt
tggggccatgttgaagaggttgagctcattaatgatggctctggactaggttttggaata
gttggaggaaaaacaagtggcgtggttgtgaggactatagttcctggaggattagcagat
cgagatggaagactccagacaggggaccacatcttgaagattggtggcacaaacgtgcag
ggaatgaccagtgagcaagttgcacaagttctaaggaactgtgggaattcagtcaggatg
ctcgttgctagagatccagctggtgacatttcagtcaccccccctgcccctgcagcctta
cctgttgccctgcctactgtagccagcaagggccctggttctgacagttctctttttgaa
acttataatgttgagcttgtgagaaaagatgggcagagtcttggaattagaattgttggc
tatgttggaacatctcatacaggggaagcttcagggatttatgtgaaaagtataatacct
ggcagtgctgcgtaccacaatggccacattcaagtgaatgacaaaatagttgctgtcgat
ggcgtgaacattcagggttttgccaaccatgatgttgttgaagtattacgaaatgcaggg
caggtggtacacctaaccctagttcgaaggaagacatcctcatctacttctccacttgaa
ccaccttcagacagaggaactgttgtagaaccactgaaaccaccagctctctttctaact
ggagcagtggaaactgaaactaatgtggatggtgaagatgaggaaattaaagaaagaatt
gatactttaaaaaatgacaacatacaagccttagaaaaattggaaaaagtcccagactct
ccagaaaatgagctgaaatccagatgggaaaacctgttgggtcctgattatgaagtaatg
gttgctactttggacacacagattgcagatgatgctgagttacagaaatattcaaagctg
ctgcctattcacactctgaggcttggtgtggaagtggattcctttgatgggcaccattat
atttcttcaattgtttctggtggtcctgttgatacattgggtctcctacagccagaagat
gagctgcttgag