GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:02:54

Sequence gi568815597r:51932700_52133761 : 201062 bp : 43.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -    743    619  125  1  2  114   76   114 0.849  13.03
 1.08 Intr -   4713   4595  119  0  2   75   64   241 0.957  19.66
 1.07 Intr -  44418  44122  297  0  0   85   59   447 0.019  38.57
 1.06 Intr -  65339  65250   90  2  0   81   85    30 0.084   2.19
 1.05 Intr -  65865  65837   29  1  2   73   92    16 0.050  -1.67
 1.04 Intr -  90875  90792   84  0  0   81   75    92 0.926   6.99
 1.03 Intr -  91880  91811   70  2  1   58   82    59 0.625   1.05
 1.02 Intr -  94649  94576   74  0  2   80   94    29 0.574   1.83
 1.01 Init -  95918  95879   40  2  1   56  115    -7 0.572  -0.84
 1.00 Prom -  97024  96985   40                              -3.26

 2.03 PlyA -  97242  97237    6                               1.05
 2.02 Term - 101187  99998 1190  1  2   50   47  1249 0.167 108.91
 2.01 Init - 122397 122301   97  0  1   88   36   150 0.473   8.27
 2.00 Prom - 124829 124790   40                              -6.36

 3.00 Prom + 125339 125378   40                              -8.16
 3.01 Init + 127149 127202   54  2  0   67  113    43 0.470   5.98
 3.02 Intr + 132126 132239  114  2  0  104   64    67 0.600   6.54
 3.03 Intr + 150641 150842  202  1  1   48  100    91 0.160   5.16
 3.04 Intr + 153413 153472   60  0  0   38  111   120 0.989   8.01
 3.05 Term + 154013 154059   47  0  2  124   42    39 0.933   0.27
 3.06 PlyA + 154438 154443    6                               1.05

 4.03 PlyA - 154920 154915    6                               1.05
 4.02 Term - 177726 177715   12  0  0  118   49     9 0.410  -1.80
 4.01 Init - 183746 183684   63  2  0   61  101    49 0.470   4.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -   6163   6161    3  1  0   93   53     0 0.830  -3.00
S.002 Sngl - 101062  99998 1065  1  0   71   47  1179 0.825 109.25
S.003 Init + 150647 150842  196  1  1   77  100    87 0.820   7.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:51932700_52133761|GENSCAN_predicted_peptide_1|310_aa
MVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILF
LDPSGKVHPEIINENGNPSYKYFYVSAEQAGVREIFASWIPPLLTVCALAMEQCPCCRFE
PLSPRKQQLMASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAF
VSTVGIDFKVKTVYRHEKRVKLQIWVSPGNLGQDFPEKRLACQYKGLEDTAGQERYRTIT
TAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTE
KGQLLAEQLX

>gi568815597r:51932700_52133761|GENSCAN_predicted_CDS_1|930_bp
atggtgattattcataaatcctggtgtggagcttgcaaagctctaaagcccaaatttgca
gaatctacggaaatttcagaactctcccataattttgttatggtaaatcttgaggatgaa
gaggaacccaaagatgaagatttcagccctgacgggggttatattccacgaatccttttt
ctggatcccagtggcaaggtgcatcctgaaatcatcaatgagaatggaaaccccagctac
aagtatttttatgtcagtgccgagcaagcaggtgttcgggagatatttgctagctggatt
ccacccctgctgacagtgtgtgccctggcgatggagcagtgtccttgttgcagatttgaa
ccactttcacctcgtaaacagcagctgatggcttcagtgacagatggtaaaactggagtc
aaagatgcctctgaccagaattttgactacatgtttaaactgcttatcattggcaacagc
agtgttggcaagacctccttcctcttccgctatgctgatgacacgttcaccccagccttc
gttagcaccgtgggcatcgacttcaaggtgaagacagtctaccgtcacgagaagcgggtg
aaactgcagatctgggtgagtcccgggaatcttgggcaggattttcctgagaagcggctg
gcctgccagtacaagggcttagaggacacagctgggcaggagcggtaccggaccatcaca
acagcctattaccgtggggccatgggcttcattctgatgtatgacatcaccaatgaagag
tccttcaatgctgtccaagactgggctactcagatcaagacctactcctgggacaatgca
caagttattctggtggggaacaagtgtgacatggaggaagagagggttgttcccactgag
aagggccagctccttgcagagcagcttgnn

>gi568815597r:51932700_52133761|GENSCAN_predicted_peptide_2|428_aa
METRPRLGATCLLGFSFLLLVISSDGHNGLGKETRGSVKVKGDRKSSLHFRLTSETRTTR
KLAQRGCQWSLPERMPLVVFCGLPYSGKSRRAEELRVALAAEGRAVYVVDDAAVLGAEDP
AVYGDSAREKALRGALRASVERRLSRHDVVILDSLNYIKGFRYELYCLARAARTPLCLVY
CVRPGGPIAGPQVAGANENPGRNVSVSWRPRAEEDGRAQAAGSSVLRELHTADSVVNGSA
QADVPKELEREESGAAESPALVTPDSEKSAKHGSGAFYSPELLEALTLRFEAPDSRNRWD
RPLFTLVGLEEPLPLAGIRSALFENRAPPPHQSTQSQPLASGSFLHQLDQVTSQVLAGLM
EAQKSAVPGDLLTLPGTTEHLRFTRPLTMAELSRLRRQFISYTKMHPNNENLPQLANMFL
QYLSQSLH

>gi568815597r:51932700_52133761|GENSCAN_predicted_CDS_2|1287_bp
atggagacgcggcctcgtctcggggccacctgtttgctgggcttcagtttcctgctcctc
gtcatctcttctgatggacataatgggcttggaaaggaaacaagagggtctgtaaaagtc
aagggagacaggaagagcagtttgcacttccggcttacgtcggagacgcgtacaacccgg
aagttggcgcagcgcggttgccaatggtcgctccctgagaggatgccgctcgtggtgttt
tgcgggctgccgtacagcggcaagagccggcgtgctgaagagttgcgcgtggcgctggct
gccgagggccgcgcggtgtacgtggtggacgacgcagctgtcctgggcgcagaggaccca
gcggtgtacggcgattctgcccgtgagaaggcattgcgtggagctctgcgagcctccgtg
gaacggcgcctgagtcgccacgacgtggtcatcctggactcgcttaactacatcaaaggt
ttccgttacgagctctactgcctggcacgggcggcgcgcaccccgctctgcctggtctac
tgcgtacggcccggcggcccgatcgcgggacctcaggtggcgggcgcgaacgagaaccct
ggccggaacgtcagtgtgagttggcggccacgcgctgaggaggacgggagagcccaggcg
gcgggcagcagcgtcctcagggaactgcatactgcggactctgtagtaaatggaagtgcc
caggccgacgtacccaaggaactggagcgagaagaatccggggctgcggagtctccagct
cttgtgactccggattcagagaaatctgcaaagcatgggtccggtgccttttactctccc
gaactcctggaggccctaacgctgcgctttgaggctcccgattctcggaatcgctgggac
cggcctttattcactttggtgggcctagaggagccgttgcccctggcggggatccgctct
gccctgtttgagaaccgggccccaccaccccatcagtctacgcagtcccagcccctcgcc
tccggcagctttctgcaccagttggaccaggtcacgagtcaagtactggccggattgatg
gaagcgcagaagagcgctgtccccggggacttgctcacgcttcctggtaccacagagcac
ttgcggtttacccggcccttgaccatggcagaactgagtcgccttcgtcgccagtttatt
tcgtacactaaaatgcatcccaacaatgagaacttgccgcaactggccaacatgtttctt
cagtatttgagccagagcctgcactga

>gi568815597r:51932700_52133761|GENSCAN_predicted_peptide_3|158_aa
MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI
KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF
PRQVLDSKAPKPEDIDEEDDDVPDLVENFDEASKNEAN

>gi568815597r:51932700_52133761|GENSCAN_predicted_CDS_3|477_bp
atgaatcaagaaaagttagccaaacttcaggctcaggtccggatagggggcaagggtaca
gctcgcagaaagaagaaggtggtacatagaacagccacagctgatgacaaaaagcttcag
agttctctaaaaaaactggctgtgaataatatagctggtattgaagaggtgaacatgatt
aaagatgatgggacagttattcatttcaacaatcccaaagtccaagcttccctttctgct
aatacctttgcaattactggtcatgcagaagccaaaccaatcacagaaatgcttcctgga
atattaagtcagcttggtgctgacagtttaacaagccttaggaagttagctgaacagttc
ccacggcaagtcttggacagtaaagcaccaaaaccagaagacattgatgaggaagatgat
gatgttccagatcttgtagaaaattttgatgaggcatcaaagaatgaagctaactaa

>gi568815597r:51932700_52133761|GENSCAN_predicted_peptide_4|24_aa
MATGKVHRSTGDLKESHKDEMVLI

>gi568815597r:51932700_52133761|GENSCAN_predicted_CDS_4|75_bp
atggccacagggaaagtgcatagaagcactggggacctgaaagagagccacaaagatgag
atggtgctgatctga