GENSCAN 1.0	Date run:  3-Nov-116	Time: 02:36:16

Sequence gi568815597r:219509630_219712062 : 202433 bp : 39.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  14888  15055  168  0  0   68   68    83 0.006   3.30
 1.02 Term +  19646  19890  245  0  2   52   35   196 0.023   5.78
 1.03 PlyA +  20872  20877    6                               1.05

 2.00 Prom +  23005  23044   40                              -6.65
 2.01 Init +  23062  23177  116  0  2   73   98    79 0.751   7.13
 2.02 Intr +  32537  32576   40  2  1   95   97    14 0.029   0.31
 2.03 Intr +  41185  41290  106  0  1   55   65    77 0.259   0.97
 2.04 Term +  42462  42613  152  1  2   47   43   138 0.682   2.29
 2.05 PlyA +  43806  43811    6                               1.05

 3.05 PlyA -  44209  44204    6                               1.05
 3.04 Term -  60931  60790  142  0  1   92   42   101 0.446   2.32
 3.03 Intr -  65569  65527   43  2  1   97   97    56 0.089   3.78
 3.02 Intr -  66573  66519   55  0  1   35   95    49 0.026  -2.07
 3.01 Init -  75950  75741  210  2  0   44   84   121 0.072   6.13
 3.00 Prom -  81808  81769   40                              -2.85

 4.05 PlyA -  81949  81944    6                               1.05
 4.04 Term -  82844  82761   84  2  0   84   48   133 0.797   5.57
 4.03 Intr -  84048  83957   92  1  2  117   47    37 0.585   1.29
 4.02 Intr -  90950  90881   70  2  1   93   89    15 0.209  -0.06
 4.01 Init -  93739  93731    9  1  0   44  119    14 0.282  -0.16
 4.00 Prom -  95438  95399   40                              -7.55

 5.02 PlyA -  95800  95795    6                               1.05
 5.01 Sngl - 102433 100016 2418  1  0   86   54  2267 0.977 215.26
 5.00 Prom - 118012 117973   40                              -5.75

 6.04 PlyA - 119797 119792    6                               1.05
 6.03 Term - 131216 130761  456  2  0   87   45   205 0.017  10.24
 6.02 Intr - 131528 131360  169  1  1   42   42   110 0.004   0.83
 6.01 Init - 146347 146169  179  1  2   64   42   200 0.261  11.78
 6.00 Prom - 147223 147184   40                              -9.35

 7.00 Prom + 149542 149581   40                              -4.25
 7.01 Init + 151288 151684  397  0  1   32   29   238 0.452   9.21
 7.02 Intr + 156664 156812  149  2  2   87   62    37 0.206   0.03
 7.03 Intr + 159576 159696  121  2  1   53   97    58 0.364   2.35
 7.04 Intr + 162172 162291  120  2  0   52    9   154 0.211   3.45
 7.05 Term + 170015 170190  176  0  2   48   41   162 0.266   4.44
 7.06 PlyA + 170240 170245    6                               1.05

 8.03 PlyA - 170645 170640    6                               1.05
 8.02 Term - 173123 172980  144  2  0   66   49   133 0.726   4.13
 8.01 Init - 183358 183299   60  1  0   82  116    13 0.406   4.80
 8.00 Prom - 184504 184465   40                              -6.55

 9.00 Prom + 189792 189831   40                              -6.55
 9.01 Init + 196569 196644   76  2  1   89   54    78 0.439   5.80
 9.02 Intr + 197532 197647  116  1  2   51   62    74 0.539   0.35
 9.03 Intr + 200448 200570  123  2  0   62   95    57 0.526   3.66
 9.04 Term + 200806 200970  165  0  0  107   38    74 0.516   1.23
 9.05 PlyA + 202077 202082    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  11767  11617  151  1  1   82   93   134 0.929  13.55
S.002 Sngl +  19688  19861  174  1  0   74   42   194 0.915   8.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:219509630_219712062|GENSCAN_predicted_peptide_1|137_aa
XCLYLQFSLNQAALILSLLKWSVLNLSATVQGFHLTWDFGFNCPNIRNRTFTASVTSPTS
TTTTLRIKFQHAFWWGPTISKPQQLVTCRVPVSNNQSHECQDAVRAAAAAAGTTAAQQQP
ADALATTMNSPVLGPRP

>gi568815597r:219509630_219712062|GENSCAN_predicted_CDS_1|414_bp
nattgcttatacctacaattctccctgaaccaagctgctctgattctatccctcttaaag
tggtcagtcctcaatctctctgcaactgttcaaggtttccatcttacatgggactttggc
ttcaactgccccaacattcgcaacagaacatttactgcctctgtaactagccccacctcc
accaccaccacattaagaatcaaatttcaacatgcattttggtggggaccaaccatatcc
aaaccacagcagctggtcacttgcagggttccagtgtcaaataaccagtcccatgaatgt
caggatgcagttagagcagcagcagcagcagcagggaccacagcagcacagcagcagcct
gctgatgccttggccacaaccatgaatagtcctgtgctgggacctcgaccctaa

>gi568815597r:219509630_219712062|GENSCAN_predicted_peptide_2|137_aa
MEESSTALRWEEQRDSTEASGGQKQGRRETTRDEIKHIRWLEEIENLRPKHLEHKLETPC
QLLLVNGSKLLLLQSNEDPALLYLGTISLASLKGDNECISEEEIISEQSGKWRNADQGPE
NPLAYIGDEESLIILGS

>gi568815597r:219509630_219712062|GENSCAN_predicted_CDS_2|414_bp
atggaggagagttccacagccctaaggtgggaagagcagagggacagcacagaggccagt
ggaggtcagaaacagggaagaagggagacgacaagagatgagatcaaacacataaggtgg
cttgaagaaatagagaatttaaggccaaaacatttggagcataagctggaaacgccctgc
cagctgctgcttgtcaatggatctaaacttctacttttacagtctaatgaagacccagcc
cttctctatctggggacaatctctctggcatcacttaaaggagacaatgaatgtatttct
gaggaagagatcatctcagaacagtcaggcaaatggagaaatgctgaccaaggaccagag
aacccacttgcttacattggagatgaagaaagtcttattattctggggagctaa

>gi568815597r:219509630_219712062|GENSCAN_predicted_peptide_3|149_aa
MKKQGNTTPSKEHMNSPVTDPKAKEIYEMPEKEFKIMFLRKLNKIQENRDSQFNEIRKTI
HDLNEKFHKEGCLFFVRYQYENSRSSERSLQRFSGSIQGETQRCRTKSHPKKKLFGFGSL
ASGCDSIVLLRSPTLTTVLRFGGGGGGEY

>gi568815597r:219509630_219712062|GENSCAN_predicted_CDS_3|450_bp
atgaaaaaacaaggaaacacaacaccttcaaaggaacatatgaattctccagtgacagat
cccaaagcaaaggaaatctatgaaatgccagaaaaggaatttaaaataatgttcttaagg
aaactgaataagatacaagagaacagagatagtcaatttaatgaaatcagaaaaacaatt
catgatttgaatgagaaattccacaaagagggatgccttttctttgtccgttatcaatat
gaaaacagcagatccagtgagagatcgctccagcgcttctccgggagcatccaaggagag
acacaaaggtgccgaacaaagtcccatccaaaaaaaaaattatttggctttggttccttg
gcaagtggctgtgactcaattgttctccttcgatctcctacccttactactgtacttcgt
tttggagggggtggagggggagagtattaa

>gi568815597r:219509630_219712062|GENSCAN_predicted_peptide_4|84_aa
MFLKPNISPLSAFPLAVPSAWIALPSAVGPKGYPRNILNAKHCLRSAVGQLNPWQCSDLI
IQTYPQREEPDEMRKARFTFKRKK

>gi568815597r:219509630_219712062|GENSCAN_predicted_CDS_4|255_bp
atgtttctgaagccaaacatttccccacttagtgcctttccattggctgttccatctgcc
tggattgctcttccttcagctgttggtcccaagggataccctagaaatatactaaacgct
aaacattgtctcaggtctgctgttggacaactcaacccatggcagtgctctgatctaatt
atccagacgtatccacagagagaggaaccagatgaaatgcggaaagcacggttcaccttc
aagagaaagaagtag

>gi568815597r:219509630_219712062|GENSCAN_predicted_peptide_5|805_aa
MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRRVCRFRHMEIDKK
RSEIPCYWENQPTGCQKLNCVFHHNRGRYVDGLFLPPSKSVLPTVPESPEEEVKASQLSV
QQNKLSVQSNTSPQLRSVMKVESSENVPSPKHPPVVINAADDDEDDDDQFSEEGDETKTP
TLQPTPEVHNGLRVTSVRKPAVNIKQGECLHFGIKTLEEIKSKKMKEKSEEQGEGSSGVS
SLLLHPEPVPGPEKENVRTVVRTVTLSTKQGEEPLVRLGLTETLGKRKFSTGGDSDPPLK
RSLAQRLGKKVEAPETNTDETPKKAQVSKSLKERLGMSADPNNEDATDKVNKVGEIHVKT
LEEMLLERASQKHGESQTKLKTEGPSKTDDSTSGARSSSTIRIKTFSEVLAEEEHRQQEA
ERQKSKKDTTCIKLKTDSEIKKTVVLPPIVASKGQSEEPAGKTKSMQEVHMKTVEEIKLE
KALRVQQSSESSTSSPSQHEATPGARLLLRITKRTWRKEEKKLQEGNEVDFLSRVRMEAT
EASVETTGVDITKIQVKRCEIMRETRMQKQQEREKSVLTPLQGDVASCNTQVAEKPVLTA
VPGITWHLTKQLPTKSSQKVEVETSGIADSLLNVKWSAQTLEKRGEAKPTVNVKQSVVKV
VSSPKLAPKRKAVEMHPAVTAAVKPLSSSSVLQEPPAKKAAVDAVVLLDSEDKSVTVPEA
ENPRDSLVLPPTQSSSDSSPPEVSGPSSSQMSMKTRRLSSASTGKPPLSVEDDFEKLTWE
ISGGKLEAEIDLDPGKDEDDLPLEL

>gi568815597r:219509630_219712062|GENSCAN_predicted_CDS_5|2418_bp
atgcctaatcaaggagaagactgctatttttttttctattctacatgtaccaaaggtgac
agctgcccattccgtcactgtgaagctgcactaggcaatgaaactgtttgcacattatgg
caagaagggcgctgttttcgacgggtgtgcaggtttcggcacatggagattgataaaaaa
cgcagtgaaattccttgttattgggaaaatcagccaacaggatgtcaaaaattaaactgc
gttttccatcacaatagaggacgatatgttgatggccttttcctacctccgagcaaaagt
gtgttgcccactgtgcctgagtcaccagaagaggaagtgaaggctagccaactttcagtt
cagcagaacaaattgtctgtccagtccaatacttcccctcagctgcggagcgttatgaaa
gtagaaagttccgaaaatgttcctagccccaagcatccaccagttgtaattaatgctgca
gatgatgatgaagatgatgatgatcagttttctgaggaaggtgatgaaaccaaaacacct
accctgcaaccaactcctgaagttcacaatggattacgagtgacttctgtccggaaacct
gcagtcaatataaagcaaggtgaatgtttgcattttggaataaaaactcttgaggaaatt
aagtcaaagaaaatgaaggaaaaatctgaggagcaaggtgagggttcttcaggagtttcc
agtcttttactccaccctgagcctgttccaggtcctgaaaaagaaaatgtcaggactgtg
gtgaggacagtaactctctccaccaaacaaggagaagaacccttggttagattgggcctt
actgagacactggggaaacgaaaattttcgacaggcggtgacagtgatcctccattaaag
cgtagcctggcacagaggctagggaagaaagttgaagctccagaaactaacactgacgaa
acaccaaagaaagctcaagtttccaagtctcttaaggagcgattaggcatgtcagctgat
ccaaataatgaggacgcaacagataaagttaataaagttggtgagatccatgtgaagaca
ttagaagaaatgcttcttgaaagagccagtcagaaacatggggaatcgcaaactaaactc
aagacagaaggaccttcaaaaactgatgattctacttcaggagcaagaagctcctccact
atccgtatcaaaaccttctctgaggtcctggctgaagaagaacataggcagcaggaagca
gagagacaaaaaagcaaaaaggatacaacttgcatcaagctaaagactgatagtgaaatt
aaaaaaacagtagttttgccacccattgttgccagcaaaggacaatcagaggagcctgca
ggtaaaacaaagtccatgcaggaggtgcacatgaagacggtggaagaaattaaactggag
aaggcactgagggtgcagcagagctctgagagcagcaccagctccccgtctcaacatgag
gccactccaggggcaaggttgctgctgcgaatcaccaaaagaacatggaggaaagaagag
aagaaacttcaggaaggaaatgaagttgattttctgagccgtgttagaatggaagctaca
gaggcttcagttgagaccacaggagttgacatcactaaaattcaagtcaagagatgtgag
atcatgagagagacgcgcatgcagaaacagcaggagagggaaaaatcagtcttgacacct
cttcagggagatgtagcctcttgcaatacccaagtggcagagaaaccagtgctcactgct
gtgccaggaatcacatggcacctgaccaagcagcttcccacaaagtcatcccagaaggtg
gaggtagaaacctcagggattgcagactcattattgaatgtgaaatggtcagcacagacc
ttggaaaaaaggggtgaagctaaacccacagtgaacgtgaagcaatctgtggttaaagtt
gtgtcatcccccaaattggccccaaaacgtaaggcagtggagatgcaccctgctgtcact
gccgctgtgaagccactcagctccagcagcgtcctacaggaacccccagccaaaaaggca
gctgtggatgctgttgtcctgcttgactctgaggacaaatcagtcactgtgcctgaagca
gaaaatcctagagacagtcttgtgctgcctccaacccagtcctcttcagattcctcaccc
ccggaggtgtctggcccttcctcatcccaaatgagcatgaaaactcgccgactcagctct
gcctcaacaggaaagcccccactctctgtggaggatgattttgagaaactaacatgggag
atttcaggaggcaaattggaagctgagattgacctggatcctgggaaagatgaagatgac
cttccgcttgagctatga

>gi568815597r:219509630_219712062|GENSCAN_predicted_peptide_6|267_aa
MALEYSTLTLVGMSKIQEITTTATTTTTATKQDLSMGQMDSEKTCSEVTEEFPIQECGPQ
TKASTALGLAEGPQLPLPGYYLCSFKAQGLYNQQVVNPARLASFPSGQRVPAIPAQMSPC
GHHWLRPTASTTRLLPMFTQGLFSQFVVNAVKHGSLPSGMWAPFWPRKDPEMLSSSQSLK
LGMPGIHLVLYPTVAQLVPKLQDKVSFAFHSCLLKHKEFLPIATIARNVLGHNRRQQSFD
FSLRACSEYCLATTADYSEPKGSLVSR

>gi568815597r:219509630_219712062|GENSCAN_predicted_CDS_6|804_bp
atggcattggagtactccacactcacactggttggaatgtcaaagatacaggaaataaca
acaacagccacaacaacaacaacagcaacaaagcaggatctttccatgggccaaatggac
tctgaaaaaacttgtagtgaagtcactgaggagttccccattcaagaatgtgggccacag
accaaagctagcacagcactgggtcttgccgaaggcccacagttaccactgcctggatac
tacctatgttcattcaaggcccaagggctctacaatcagcaagtggtgaatccagccagg
cttgcatccttcccttcagggcagcgagttcctgcaatcccagcacagatgagtccctgc
ggccaccactggctcaggccgacagcgagtaccaccaggctactgccaatgttcacccaa
gggctcttcagtcagtttgtggtgaatgctgtcaagcatgggtctctcccttcagggatg
tgggcccccttctggcccaggaaagatccagaaatgctgtccagtagccaaagcctgaaa
ctggggatgccaggaatccacttggtgctctaccccactgtggctcagctggtacctaag
ctgcaagacaaagtgtcctttgcttttcactcttgtttgctcaagcataaggagtttctc
cccatagccaccatagctaggaatgtgctgggtcataaccgaagacagcagagctttgat
ttttcacttagggcctgcagtgagtactgcctggctaccactgctgattactcagagccc
aagggctctttagtcagcaggtga

>gi568815597r:219509630_219712062|GENSCAN_predicted_peptide_7|320_aa
MALANGTKSRRAKLRECEVGDVAGEEKVILGQDSCKMTDNENENMGSSLESPEFFSSSSA
AYIWLSGALCFLADDPFIFPVLHLKEKERSGEVGSNYSSQPVLERPLPCTWELFVLTLQA
LTPGCCFPLSTEGKPVSQSQAHFYKCFMWEGTKPISQKADSEMIGSVSFLPPADLLLHGD
FPHTVPERAQVTFVLYGATTASSSTLSKLLSITNLVSFIYKEALSEAADHPADKDSEEDT
KENTEYGLPLIRVHKRPKELNKERNLDTQTDTKREEGRLKTGAATGVMQLQAQEHHELPA
TTRRWEEIRKNSSLEPLEGA

>gi568815597r:219509630_219712062|GENSCAN_predicted_CDS_7|963_bp
atggctctggccaacgggaccaaatctcggagggccaaattgagggagtgtgaagtgggg
gatgtggctggagaagagaaggtgatactaggccaggacagctgcaaaatgactgacaac
gagaatgagaatatgggttcctctcttgagtccccagaatttttttcaagttcttcagct
gcatacatttggctctctggcgccctttgttttctggctgatgatccttttatttttcct
gtcctacatttaaaagagaaggaaagaagcggggaagtcggttccaactactcctcgcag
ccagtcctcgagcgccctctgccgtgtacatgggagctctttgtcttaaccttgcaagcg
cttactcctgggtgttgctttccgctatcaacagaagggaagcccgtttctcagagccaa
gcacatttctataaatgcttcatgtgggaaggaacaaaaccaataagtcagaaagctgac
tcagaaatgattggaagtgtttcctttcttcccccagcagatttgttgctccatggtgat
tttccgcatactgtgccggaaagagcacaggtcacctttgttctttatggcgctaccact
gccagtagctcgaccttgagcaaattactcagcatcacaaatcttgtctccttcatctat
aaagaagcactgagtgaggcagctgaccacccagcagacaaggactcagaggaagatacc
aaggagaatacagagtatggcttacccctgatcagagtgcacaagagacccaaggagctc
aacaaagagagaaatctggacacacagacagacacaaagagggaagaaggccgtttgaag
acaggggcagccactggagtgatgcagctacaagcccaggaacaccatgagttgccagca
accaccagaaggtgggaagagattaggaagaattcttccctagagcctttggaaggagca
tag

>gi568815597r:219509630_219712062|GENSCAN_predicted_peptide_8|67_aa
MQPNILTETRVSPGKASTLKITKGGDLDEISYINAREGTMKLCMGRKGVFSSFPKLLEDL
SDPMDSQ

>gi568815597r:219509630_219712062|GENSCAN_predicted_CDS_8|204_bp
atgcagccaaacatactgacagagaccagggtatcccctgggaaagccagtaccctgaag
atcactaaaggtggggatcttgatgaaattagctatatcaatgcaagagaaggtactatg
aagctgtgcatgggaagaaaaggtgtcttttcatccttcccaaagcttttggaggatctc
agtgatccaatggattcacaatga

>gi568815597r:219509630_219712062|GENSCAN_predicted_peptide_9|159_aa
MAIIKKSRNNRCREVAEKKECFYTVETASAIPAFCNHHPDQSAAINIKARPSISKKDYNS
LKVQISWTTSLRISFPAWGEARIDNKRNVHKFWKAERSSSHCTLKPILSIHSNFKPTPGA
ETTASHRILYQIPQLWRIRIILPLFQIIHCGSASLIEPN

>gi568815597r:219509630_219712062|GENSCAN_predicted_CDS_9|480_bp
atggcgattattaaaaagtcaagaaacaacagatgccgtgaggttgcagagaagaaggaa
tgcttttacacggttgaaactgcctcagccatcccagccttctgcaaccaccaccctgat
cagtcagcagccatcaacattaaggcaagaccctccatcagcaaaaaagattacaactcg
ctaaaggttcagataagctggactacatctctcagaatttccttccctgcatggggcgag
gctaggattgacaacaagagaaatgttcataagttttggaaagcagaacgaagtagcagc
cattgcacactgaagcccatcctatccatccacagcaacttcaagcccacaccaggtgca
gagaccacagcatcccatagaattctttatcagatcccacagttatggaggatccgtatc
atactccccttatttcagatcattcactgtggctctgcttctctgatcgagccaaactaa