GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:31:30

Sequence gi568815597r:202231838_202435754 : 203917 bp : 43.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   4085   4160   76  2  1  130   47    94 0.694   6.81
 1.02 PlyA +   5624   5629    6                              -0.45

 2.07 PlyA -   7200   7195    6                               1.05
 2.06 Term -   7382   7241  142  1  1   63   43   127 0.496   3.10
 2.05 Intr -   8146   8088   59  1  2   88   48    23 0.379  -4.02
 2.04 Intr -  11998  11872  127  0  1  109   68    42 0.354   4.98
 2.03 Intr -  12776  12633  144  1  0   22   59   144 0.912   4.30
 2.02 Intr -  12935  12836  100  0  1   90   64    32 0.648   0.17
 2.01 Init -  21168  21105   64  0  1   80   69    61 0.603   4.71
 2.00 Prom -  27220  27181   40                              -3.36

 3.00 Prom +  28951  28990   40                              -4.96
 3.01 Init +  33434  33514   81  1  0   96   37    29 0.071  -0.43
 3.02 Intr +  39079  39191  113  0  2    0  110   130 0.511   5.58
 3.03 Intr +  44469  44684  216  0  0  118   68   362 0.985  34.82
 3.04 Intr +  48944  49015   72  2  0  111   74    97 0.987   9.12
 3.05 Intr +  50695  50824  130  1  1   58   75    37 0.715   0.10
 3.06 Intr +  51696  51822  127  2  1   81   80    56 0.577   4.35
 3.07 Intr +  56995  57094  100  2  1   18   94    30 0.041  -4.23
 3.08 Intr +  65671  65739   69  1  0  128   67   112 0.716  11.40
 3.09 Intr +  69012  69083   72  0  0   99   76   111 0.981   9.52
 3.10 Intr +  69327  69398   72  0  0   57   93    54 0.713   1.32
 3.11 Intr +  71442  71510   69  0  0   93   76    99 0.955   7.50
 3.12 Intr +  72722  72793   72  2  0  142   76    74 0.998  10.12
 3.13 Intr +  73847  73912   66  2  0  120   82    32 0.917   3.82
 3.14 Intr +  75031  75102   72  1  0   88   76   107 0.994   8.02
 3.15 Intr +  75493  75564   72  1  0  113   87    75 0.997   8.42
 3.16 Intr +  77214  77339  126  0  0   90   78    75 0.988   6.49
 3.17 Intr +  78360  78520  161  0  2   83   74   162 0.997  13.93
 3.18 Intr +  82965  83045   81  1  0  126   94    92 0.999  13.21
 3.19 Term +  86115  87370 1256  1  2   99   36  1260 0.902 113.65
 3.20 PlyA +  87901  87906    6                               1.05

 4.00 Prom +  92539  92578   40                              -5.96
 4.01 Sngl +  95003  95341  339  1  0  104   44   148 0.975   8.03
 4.02 PlyA +  99884  99889    6                               1.05

 5.05 PlyA - 100300 100295    6                               1.05
 5.04 Term - 101498 101331  168  2  0   56   55   143 0.349   5.68
 5.03 Intr - 101718 101613  106  2  1  107   87    17 0.999   3.72
 5.02 Intr - 103221 103152   70  1  1  116   88    58 0.994   6.84
 5.01 Init - 103917 103809  109  0  1   86   49    47 0.875   1.02
 5.00 Prom - 112246 112207   40                              -7.76

 6.00 Prom + 114177 114216   40                              -5.06
 6.01 Init + 115815 115817    3  2  0  108   81     0 0.847   1.30
 6.02 Intr + 116754 117305  552  2  0  -28   93   599 0.345  41.85
 6.03 Intr + 172583 172633   51  1  0   95   99     6 0.024   1.50
 6.04 Intr + 184950 185080  131  2  2   76   70   133 0.850   9.79
 6.05 Intr + 190783 190901  119  1  2  100   86   113 0.996  12.41
 6.06 Intr + 193729 193888  160  2  1   61   72   187 0.999  13.45
 6.07 Intr + 195203 195347  145  2  1   83   53   110 0.997   7.28
 6.08 Intr + 197018 197092   75  1  0   96   89    95 0.996  10.11
 6.09 Intr + 198894 198973   80  2  2  110   63    62 0.985   4.25
 6.10 Intr + 199643 199782  140  2  2   35   95   193 0.906  14.81
 6.11 Intr + 202819 202931  113  2  2   72   96    39 0.570   3.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:202231838_202435754|GENSCAN_predicted_peptide_1|25_aa
XMLQNNQLGGIPAEALWELPSLQSL

>gi568815597r:202231838_202435754|GENSCAN_predicted_CDS_1|78_bp
nngatgctgcagaacaatcagctgggaggaatccccgcagaggcgctgtgggagctgccg
agcctgcagtcgctgtga

>gi568815597r:202231838_202435754|GENSCAN_predicted_peptide_2|211_aa
MTRECQNVFLLGALKPSIKECVGEMEAPEDIQLPEPVNGTLFRKGAFANVLRILGDHRET
QRERGESYVKAEGRDWSDAATRNASSCRKLEEAKKHPPQHPQSAQETQENDSLRKISKFM
HNWLLLLESPRAPTWALLKICFREALPHPVSITTTNDHCRSSNKRPSRQAQGYLRTPARQ
QKQEKSRPEDTYPGWKTPTPEDGERGHPGTA

>gi568815597r:202231838_202435754|GENSCAN_predicted_CDS_2|636_bp
atgactcgagagtgtcagaatgtcttcctgctgggtgcgttgaagccctcaattaaggag
tgtgtgggtgaaatggaggccccagaagatatacaacttccagaacctgtaaatgggaca
ttatttagaaaaggggcctttgcaaatgtattaaggatcttgggagaccacagagagaca
cagagagaaagaggagaaagctacgtgaaggcagaaggcagagactggagtgatgcagcc
acaaggaacgccagcagctgccggaagctggaagaggcaaagaagcacccaccccagcac
cctcagagtgctcaggagacccaagaaaatgactccttgagaaaaatctccaaattcatg
cacaactggctccttctcttggaatcacccagggctcccacttgggccctcttgaagatt
tgcttccgggaggctctcccacatccagtcagcattactactactaatgatcattgtaga
agtagcaacaaaaggcccagtcgccaggcgcagggctacttgcgtacgccagcaagacag
cagaagcaggaaaagagccggccggaagacacctaccctggttggaagacacctacccct
gaagatggagaaagaggccatccgggtaccgcgtag

>gi568815597r:202231838_202435754|GENSCAN_predicted_peptide_3|1008_aa
MGLSHQEYSGSDSPELSLLGSSGLVCSLGEYEKQFGPRQVKLFPQSLSKPELACEVPANL
PHYCRRLDANLISLVPERSFEGLSSLRHLWLDDNALTEIPVRALNNLPALQAMTLALNRI
SHIPDYAFQNLTSLVVLHLHNNRIQHLGTHSFEGLHNLETLHLPSGDIRAFRAVFGVAMD
EQGRRESNAMNPGVWALLALLGNQQREDQTPAAQAAVWLELWFGSSADSSKWGKRPPAIP
PGEEGPGPSLWERLSGHILLWSGTPQSLQVACINGPQTSRDLNYNKLQEFPVAIRTLGRL
QELGFHNNNIKAIPEKAFMGNPLLQTIHFYDNPIQFVGRSAFQYLPKLHTLSLNGAMDIQ
EFPDLKGTTSLEILTLTRAGIRLLPSGMCQQLPRLRVLELSHNQIEELPSLHRCQKLEEI
GLQHNRIWEIGADTFSQLSSLQALDLSWNAIRSIHPEAFSTLHSLVKLDLTDNQLTTLPL
AGLGGLMHLKLKGNLALSQAFSKDSFPKLRILEVPYAYQCCPYGMCASFFKASGQWEAED
LHLDDEESSKRPLGLLARQAENHYDQDLDELQLEMEDSKPHPSVQCSPTPGPFKPCEYLF
ESWGIRLAVWAIVLLSVLCNGLVLLTVFAGGPVPLPPVKFVVGAIAGANTLTGISCGLLA
SVDALTFGQFSEYGARWETGLGCRATGFLAVLGSEASVLLLTLAAVQCSVSVSCVRAYGK
SPSLGSVRAGVLGCLALAGLAAALPLASVGEYGASPLCLPYAPPEGQPAALGFTVALVMM
NSFCFLVVAGAYIKLYCDLPRGDFEAVWDCAMVRHVAWLIFADGLLYCPVAFLSFASMLG
LFPVTPEAVKSVLLVVLPLPACLNPLLYLLFNPHFRDDLRRLRPRAGDSGPLAYAAAGEL
EKSSCDSTQALVAFSDVDLILEASEAGRPPGLETYGFPSVTLISCQQPGAPRLEGSHCVE
PEGNHFGNPQPSMDGELLLRAEGSTPAGGGLSGGGGFQPSGLAFASHV

>gi568815597r:202231838_202435754|GENSCAN_predicted_CDS_3|3027_bp
atgggactgtcccaccaggagtactcaggctccgactccccagagttgtcacttttgggc
tcttcagggcttgtgtgctctctgggggagtatgagaagcagtttggccctcgacaggtt
aagctgtttccccagagcctaagcaagcccgaactggcctgtgaggtccctgctaatctg
ccccattactgcaggcgcctagatgccaacctcatctccctggtcccggagaggagcttt
gaggggctgtcctccctccgccacctctggctggacgacaatgcactcacggagatccct
gtcagggccctcaacaacctccctgccctgcaggccatgaccctggccctcaaccgcatc
agccacatccccgactacgcgttccagaatctcaccagccttgtggtgctgcatttgcat
aacaaccgcatccagcatctggggacccacagcttcgaggggctgcacaatctggagaca
ctccaccttccctcaggagatataagagcttttagggcagtgtttggagttgccatggat
gagcagggcaggagggagtccaatgccatgaaccctggagtgtgggcgctgttagctttg
ctgggaaatcagcagagggaagatcaaacccctgcggcccaagctgcggtttggctggag
ctgtggtttggctcctctgcagactcctctaagtggggaaagcggcccccagccatacca
cctggggaggaggggccaggtccaagtctctgggaaagattatcgggccacattctgctg
tggtcaggaacacctcagagccttcaggtcgcctgcattaacgggccccaaacatccaga
gacctgaattataacaagctgcaggagttccctgtggccatccggaccctgggcagactg
caggaactggggttccataacaacaacatcaaggccatcccagaaaaggccttcatgggg
aaccctctgctacagacgatacacttttatgataacccaatccagtttgtgggaagatcg
gcattccagtacctgcctaaactccacacactatctctgaatggtgccatggacatccag
gagtttccagatctcaaaggcaccaccagcctggagatcctgaccctgacccgcgcaggc
atccggctgctcccatcggggatgtgccaacagctgcccaggctccgagtcctggaactg
tctcacaatcaaattgaggagctgcccagcctgcacaggtgtcagaaattggaggaaatc
ggcctccaacacaaccgcatctgggaaattggagctgacaccttcagccagctgagctcc
ctgcaagccctggatcttagctggaacgccatccggtccatccaccccgaggccttctcc
accctgcactccctggtcaagctggacctgacagacaaccagctgaccacactgcccctg
gctggacttgggggcttgatgcatctgaagctcaaagggaaccttgctctctcccaggcc
ttctccaaggacagtttcccaaaactgaggatcctggaggtgccttatgcctaccagtgc
tgtccctatgggatgtgtgccagcttcttcaaggcctctgggcagtgggaggctgaagac
cttcaccttgatgatgaggagtcttcaaaaaggcccctgggcctccttgccagacaagca
gagaaccactatgaccaggacctggatgagctccagctggagatggaggactcaaagcca
caccccagtgtccagtgtagccctactccaggccccttcaagccctgtgagtacctcttt
gaaagctggggcatccgcctggccgtgtgggccatcgtgttgctctccgtgctctgcaat
ggactggtgctgctgaccgtgttcgctggcgggcctgtccccctgcccccggtcaagttt
gtggtaggtgcgattgcaggcgccaacaccttgactggcatttcctgtggccttctagcc
tcagtcgatgccctgacctttggtcagttctctgagtacggagcccgctgggagacgggg
ctaggctgccgggccactggcttcctggcagtacttgggtcggaggcatcggtgctgctg
ctcactctggccgcagtgcagtgcagcgtctccgtctcctgtgtccgggcctatgggaag
tccccctccctgggcagcgttcgagcaggggtcctaggctgcctggcactggcagggctg
gccgccgcgctgcccctggcctcagtgggagaatacggggcctccccactctgcctgccc
tacgcgccacctgagggtcagccagcagccctgggcttcaccgtggccctggtgatgatg
aactccttctgtttcctggtcgtggccggtgcctacatcaaactgtactgtgacctgccg
cggggcgactttgaggccgtgtgggactgcgccatggtgaggcacgtggcctggctcatc
ttcgcagacgggctcctctactgtcccgtggccttcctcagctttgcctccatgctgggc
ctcttccctgtcacgcccgaggccgtcaagtctgtcctgctggtggtgctgcccctgcct
gcctgcctcaacccactgctgtacctgctcttcaacccccacttccgggatgaccttcgg
cggcttcggccccgcgcaggggactcagggcccctagcctatgctgcggccggggagctg
gagaagagctcctgtgattctacccaggccctggtagccttctctgatgtggatctcatt
ctggaagcttctgaagctgggcggccccctgggctggagacctatggcttcccctcagtg
accctcatctcctgtcagcagccaggggcccccaggctggagggcagccattgtgtagag
ccagaggggaaccactttgggaacccccaaccctccatggatggagaactgctgctgagg
gcagagggatctacgccagcaggtggaggcttgtcagggggtggcggctttcagccctct
ggcttggcctttgcttcacacgtgtaa

>gi568815597r:202231838_202435754|GENSCAN_predicted_peptide_4|112_aa
MHGLNRNFNEQKYVIRQKYCQDELTGRDCGPGWKILSRLAGNLRQENAEEVKIMKREDEK
EQTNLIYFITKPEIHRLSPEPLDYTGSFGIAELSSVSFGRNLREHSSHACIL

>gi568815597r:202231838_202435754|GENSCAN_predicted_CDS_4|339_bp
atgcatggcctgaataggaatttcaatgagcaaaagtatgtgataagacagaagtactgt
caggatgagttaacaggtagagactgtgggcctgggtggaagatccttagcaggttagca
gggaacctacggcaagagaatgctgaagaagtaaagataatgaaaagggaagatgagaag
gaacagaccaacctaatttacttcatcactaaaccggagatccacaggctctcccctgag
cccctggattacacaggaagtttcggaattgcagagctgtcgagtgtcagctttgggaga
aatctcagagagcattcaagccatgcctgcattttatag

>gi568815597r:202231838_202435754|GENSCAN_predicted_peptide_5|150_aa
MQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPER
YPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNP
DDPLMADIVNIPIFLCNTYPTLSIPLTLPV

>gi568815597r:202231838_202435754|GENSCAN_predicted_CDS_5|453_bp
atgcagagagcttcacgtctgaagagagagctgcacatgttagccacagagccaccccca
ggcatcacatgttggcaagataaagaccaaatggatgacctgcgagctcaaatattaggt
ggagccaacacaccttatgagaaaggtgtttttaagctagaagttatcattcctgagagg
tacccatttgaacctcctcagatccgatttctcactccaatttatcatccaaacattgat
tctgctggaaggatttgtctggatgttctcaaattgccaccaaaaggtgcttggagacca
tccctcaacatcgcaactgtgttgacctctattcagctgctcatgtcagaacccaaccct
gatgacccgctcatggctgacatagtaaatatccccattttcctctgcaacacatatcct
accttgtctataccgctaactctccctgtgtga

>gi568815597r:202231838_202435754|GENSCAN_predicted_peptide_6|523_aa
MFPYGHQVHLGQASYYESRDDPRPGSACVLKPRERAGGTTGGRSKDGGARVSALCSGLKR
SERGGSGNSSPNSNLVLVVLAAAAEAGAMAELEHLGGKRAESARMRRAEQLRRWRGSLTE
QEPAERRGAGRQPLTRRGSPRVRFEDGAVFLAACSSGDTDEVRKLLARGADINTVNVDGL
TALHQILFIAAVSVFSFFFITQACIDENLDMVKFLVENRANVNQQDNEGWTPLHAAASCG
YLNIAEYFINHGASVGIVNSEGEVPSDLAEEPAMKDLLLEQVKKQGVDLEQSRKEEEQQM
LQDARQWLNSGKIEDVRQARSGATALHVAAAKGYSEVLRLLIQAGYELNVQDYDGWTPLH
AAAHWGVKEACSILAEALCDMDIRNKLGQTPFDVADEGLVEHLELLQKKQNVLRSEKETR
NKLIESDLNSKIQSGFFKNKEKMLYEEETPKSQEMEEENKESSSSSSEEEEGEDEASESE
TEKEADKKPEAFVNHSNSESKSSITEQIPAPAQNTFSASSARR

>gi568815597r:202231838_202435754|GENSCAN_predicted_CDS_6|1569_bp
atgttcccttacggccaccaagtgcacttagggcaggcctcttactacgagtcccgtgat
gacccgaggccgggcagcgcctgcgtattgaagccgagggagcgtgcgggcggtactact
ggcgggaggagtaaagatggcggcgcgagggtctccgccctctgctccgggctgaagcgc
tctgagagaggcggcagcggcaactcgagccccaacagtaatttagtgttggtagttttg
gcagcagctgccgaggccggagcaatggcggaactggagcacctaggagggaagcgggca
gagtcggcgcgaatgcggcgggcagagcagcttcggcgctggcggggctcgctgacagag
caggagcctgcggagcgacgaggcgcggggcggcagccgctgaccaggcgcgggagcccc
agggtccgcttcgaggacggtgctgtctttctggccgcctgctctagcggggacaccgac
gaggtgagaaagcttctggcaagaggtgctgatatcaacacggtcaacgtggacggcttg
acagccctgcaccagattctcttcatcgctgctgtttcagtgttctctttcttctttata
actcaggcatgtattgatgaaaatttggacatggtgaagtttctggtggagaacagagcc
aatgtaaaccagcaagacaacgagggctggacaccccttcatgcagcagcttcctgtggc
tatctcaacatagcagagtatttcattaatcacggagccagtgtaggtattgtcaatagt
gaaggtgaagttccctctgaccttgcagaagagccagccatgaaggatcttcttctggag
caagtaaagaagcaaggagttgatctagagcagtcaagaaaagaagaagagcagcagatg
ttgcaggatgcccgccagtggctcaacagtgggaaaatagaggatgtgaggcaggctcgc
tcaggggctacagcccttcatgtggctgctgccaagggctactctgaagtcctcagactt
ttaattcaggctggctatgaactcaatgttcaggattatgatggctggactcccctccat
gctgctgcacactggggagtgaaggaggcttgctccatcctggcagaagcactttgtgac
atggatattcgaaataaactgggccagacaccatttgatgtggctgatgagggtctcgtg
gagcatttggagttgctccagaagaagcagaatgtgcttcgaagtgaaaaggagacacgg
aataaactcattgagtcagatctgaacagcaagattcagagtgggttctttaagaacaaa
gagaagatgctctatgaggaggagacacctaagtcccaagaaatggaggaagaaaataaa
gaatctagtagctccagctcagaggaggaggaaggtgaagatgaagcttctgagtcagaa
actgagaaggaggcagataaaaagccagaagcctttgtcaatcattccaactctgaaagc
aagagtagtatcacagagcagataccagcaccagctcaaaataccttctctgcctcttct
gctaggagg