GENSCAN 1.0	Date run:  6-Nov-116	Time: 03:26:09

Sequence gi568815597r:19714421_19915101 : 200681 bp : 45.67% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2313   2465  153  2  0   87   80   143 0.832  13.67
 1.02 Term +   4394   4582  189  1  0   47   33    97 0.425  -2.45
 1.03 PlyA +   6219   6224    6                               1.05

 2.20 PlyA -   8035   8030    6                               1.05
 2.19 Term -  16760  16660  101  0  2   79   38    52 0.265  -2.41
 2.18 Intr -  23036  22952   85  2  1  111  105    39 0.972   7.29
 2.17 Intr -  25540  25404  137  2  2   96   82    91 0.817   9.59
 2.16 Intr -  26521  26357  165  2  0   67  119   197 0.968  20.63
 2.15 Intr -  31231  31112  120  2  0   50   56   171 0.758  10.57
 2.14 Intr -  32179  32036  144  2  0  134  110   131 0.999  20.15
 2.13 Intr -  32840  32743   98  1  2  100  109    94 0.400  12.35
 2.12 Intr -  38150  38007  144  1  0   70   55    60 0.394   0.30
 2.11 Intr -  41346  41214  133  1  1   43   43   177 0.650   8.40
 2.10 Intr -  56149  56122   28  1  1  128  115    25 0.573   6.89
 2.09 Intr -  57062  56888  175  1  1   34   86   126 0.182   6.94
 2.08 Intr -  58037  57753  285  1  0  110   43   108 0.014   4.96
 2.07 Intr -  66346  66160  187  2  1   66  109   124 0.494  11.05
 2.06 Intr -  71083  70986   98  0  2   51   97    85 0.967   5.35
 2.05 Intr -  72697  72606   92  1  2  111  106     7 0.778   3.59
 2.04 Intr -  77290  77111  180  1  0   46   66    98 0.159   3.46
 2.03 Intr -  82014  81898  117  0  0   67   92    23 0.592   1.26
 2.02 Intr -  82960  82883   78  1  0  122   84    10 0.675   3.75
 2.01 Init -  85757  85692   66  2  0   36   59   124 0.736   3.38
 2.00 Prom -  90155  90116   40                              -2.36

 3.03 PlyA -  91580  91575    6                               1.05
 3.02 Term - 100801  99998  804  1  0   -5   48   888 0.260  68.73
 3.01 Init - 111591 111553   39  0  0   64   92    59 0.446   4.09
 3.00 Prom - 113014 112975   40                              -3.46

 4.00 Prom + 126113 126152   40                              -2.66
 4.01 Init + 130738 130798   61  0  1   93   76    11 0.415   1.81
 4.02 Intr + 146072 146146   75  0  0   83   89    44 0.204   3.49
 4.03 Term + 157985 158121  137  0  2   77   42   153 0.445   7.78
 4.04 PlyA + 160429 160434    6                               1.05

 5.00 Prom + 162162 162201   40                              -5.86
 5.01 Init + 168094 168314  221  0  2   65   76   454 0.754  40.00
 5.02 Intr + 175965 176113  149  0  2   68   78    96 0.691   6.48
 5.03 Intr + 179948 180060  113  0  2   71   96    66 0.993   5.80
 5.04 Intr + 183120 183242  123  2  0  108   76   185 0.983  20.08
 5.05 Intr + 189853 189978  126  0  0   73   13   122 0.596   4.08
 5.06 Intr + 190471 190567   97  0  1   70   92    81 0.987   6.28
 5.07 Intr + 192012 192196  185  1  2   36   95    83 0.904   3.31
 5.08 Term + 193150 193326  177  0  0  108   41   230 0.995  17.99
 5.09 PlyA + 195992 195997    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:19714421_19915101|GENSCAN_predicted_peptide_1|113_aa
AGRADGGDTTCKGPDLKMVLHPSLGAVQQVSMEALSLGIHAGAASLKEAERFGEEQVFST
KFLPRNAAAPTKNHASHCSLSLRSRYNNNPMKQLLTTHNVKPLKRKSNLRLAT

>gi568815597r:19714421_19915101|GENSCAN_predicted_CDS_1|342_bp
gctggccgtgcagatggaggagacaccacttgcaaagggcccgacctgaaaatggtactt
catccttctcttggtgcagttcaacaggtatccatggaggccctgtccctgggcatccat
gctggagccgccagcctcaaggaagctgagcggtttggagaggagcaggtattctccacc
aaatttctgccgaggaatgcggcggcaccaactaaaaatcatgcttcccattgctccctg
agcctgagatccaggtacaacaacaatcccatgaagcaactgctaactacacacaacgta
aaaccactcaaacgaaaatccaacttgagactcgccacctag

>gi568815597r:19714421_19915101|GENSCAN_predicted_peptide_2|810_aa
MWRRGLAGHLQRPAPLSRWVVEVTSSHSSHFSPSQTCTPNAQATRLLLGDRHISNRPLCP
RRGGGAQTKSLELQSWQAPHSLDKSREGTEVLLVLTEGAFSRRRNPALSWNQCNFSDTLE
IQFYFGLDPDPKSDQGVEAPKNQYTQQGNLHISPKNHPEPEQPVFRQREAHGCFLKSGKY
FLNAYSDPGPVQKARGVAVKKQPGNCLVHTALGMAMWNRPCQRLPQQPLVAEPTAEGEPH
LPTGRELTEANRFAYAALCGISLSQLFPEPEHRAAPSHPPLGTPVGLHSDAHYGQRLAVA
VHVEGTLPFTSSTFAAASVFQKARPWQHPGEQMAFSGKPFLVAAVTSAGGSGAPSVGCTE
LISTSVLGSFCTEFMAGLVQWLELSEAVLPTMTAFASGLGGEGADVFVQILLKDPILKDD
PTVITQDLLSFSLKDGHYDARARVLVCHMTSLLQVPLEELDVLEEMFLESLKEIKEEESD
TKKSDLKTEGGGEDKDRKHPLMGDKMTESKTDLWIYEMGNAGVLLFRRMAEASRKKKENR
RKWKRYLLIGLATVGGGTVIGVTGGLAAPLVAAGAATIIGSAGAAALGSAAGIAIMTSLF
GAAGAGLTGYKMKKRVGAIEEFTFLPLTEGRQLHITIAVTGWLASGKYRTFSAPWAALAH
SREQYCLAWEAKYLMELGNALETILSGLANMVAQEALKYTVLSGIVAALTWPASLLSVAN
VIDNPWGVCLHRSAEVGKHLAHILLSRQQGRRPVTLIGFSLGARVIYFCLQEMAQEKAPP
TLFLNHSPPKSLPLYYQWGIFTPPDGRDRQ

>gi568815597r:19714421_19915101|GENSCAN_predicted_CDS_2|2433_bp
atgtggcgccgcgggcttgccggtcacctgcagaggccggcacccctgtcgcgatgggtg
gtggaggtaacatcttctcattcttcacattttagccctagccagacttgtactccaaat
gcccaggccacaagacttctactgggagacagacacattagcaaccggccattatgtcca
aggagaggtggaggggcccagacgaagtctttggagcttcagagttggcaggccccacat
tcgctggacaaatccagggagggcacagaggtactgctggtcctgacagaaggggctttt
tctcgtcgcaggaatccagcactctcttggaatcagtgtaacttctcagacacacttgag
atccagttttattttggactggatcctgatcccaaatcagatcaaggggtggaggccccc
aagaaccagtatacacagcagggcaatttgcatatttctccaaagaaccatccagaacct
gagcagcctgtcttcagacagagagaggcccacggctgtttcttgaaatctggcaagtat
ttcctgaatgcctacagtgatccaggtcctgtccagaaagctcggggtgtggcagtgaaa
aaacaaccagggaactgcctcgtacacacagcgctgggaatggccatgtggaacaggcca
tgccagaggctgcctcagcagcctctggtagctgagcccactgcagagggggagccacac
ctgcccacgggccgggagctgactgaggccaaccgcttcgcctatgctgccctctgtggc
atctccctgtcccagttatttcctgaacccgaacacagagcggccccatcccatcctccc
ctggggactcctgtaggactgcactcagatgcccactatggacagagactggcggtggca
gtgcacgtggagggcactcttcccttcacttcttccacttttgcagcagccagcgttttc
cagaaagcacgtccttggcagcatccaggagagcagatggccttctctgggaagcctttt
ctggtggctgccgtcacttctgcaggtggatccggggctccctctgtgggctgcactgaa
ctgatctccacctctgtcctaggctccttctgcacagagttcatggcaggcctggtgcag
tggctggagttgtctgaagctgtcttgccaaccatgactgcttttgcgagcggcctggga
ggtgaaggagcagatgtgtttgttcaaattttactgaaggaccccatcttgaaggacgac
ccgacggtgatcactcaggaccttctgagcttctcactcaaggatgggcactatgacgcc
cgggccagagtcctcgtttgccacatgacctccctgctccaagtgcccttggaggagctg
gatgtccttgaagagatgttcctggagagcctgaaggaaatcaaagaagaggaatctgac
acaaaaaaaagtgatttaaaaacagaaggtggtggtgaggataaggacagaaaacaccct
cttatgggagataagatgacagagagtaagaccgatttatggatctatgagatgggcaat
gcgggcgtcttgctcttcaggagaatggccgaggcatcccgaaagaagaaagaaaaccgg
aggaaatggaagcgttatctcctgataggcctggcgactgtcggaggcggaacggtgatc
ggtgtgactggaggtctagctgcaccccttgttgccgctggagcagcgacgattattggc
agcgccggggcagcggctctgggctcagcagccggcatagccatcatgacctcgctgttt
ggtgcagctggagctggcctgacaggatacaagatgaagaagcgagtgggagccattgaa
gagttcacgtttctgcctctgacggagggcaggcagctgcacatcaccatcgccgtcacg
gggtggctcgcttctggcaaataccgcaccttcagtgccccgtgggctgccctggcccac
agccgtgagcagtactgcctggcctgggaagccaagtacctgatggagctcggcaatgcc
ctggagaccatcctcagtggtctcgccaacatggtggcccaggaggccctaaagtacaca
gtgttgtctggcattgtggctgccctgacctggccagcctcactcctcagtgtcgccaat
gtcatcgacaacccctggggggtgtgtctccatcgatcagcagaggttggcaagcacctg
gcccacatcctgctctcccggcagcaggggcgacgacctgtcaccttgattggcttcagc
ctgggagccagagtcatctacttctgtctgcaggagatggctcaagagaaagcgcctcct
accctcttcctcaaccattcccctcccaagtccttgcccttgtattaccaatggggcatc
ttcacacctccagatggtcgagatcgtcaatga

>gi568815597r:19714421_19915101|GENSCAN_predicted_peptide_3|280_aa
MSEKSAKDQDKVQAPGQSEKEGQIPSKSQRRQLTLSANAQVLSDSVPPVPVPRMACTKTL
QQSQPISAGATTTTTAVAPAGGHSGSTECDLECLVCREPYSCPRLPKLLACQHAFCAICL
KLLLCVQDNTWSITCPLCRKVTAVPGGLICSLRDHEAVVGQLAQPCTEVSLCPQGLVDPA
DLAAGHPSLVGEDGQDEVSANHVAARRLAAHLLLLALLIILIGPFIYPGVLRWVLTFIIA
LALLMSTLFCCLPSTRGSCWPSSRTLFCREQKHSHISSIA

>gi568815597r:19714421_19915101|GENSCAN_predicted_CDS_3|843_bp
atgagcgagaagtcagcaaaagaccaggacaaagtccaggcacctggccagagtgaaaag
gaggggcagattccatccaagtcccagcggcgccagctgacactctctgccaatgcccag
gtgctgagcgacagtgtcccaccggtccctgtgcccagaatggcctgcaccaagaccctg
caacagtcccagcccatctccgcaggagccaccacaaccaccaccgctgtggcccctgct
gggggtcattctggctccacagaatgtgacctggagtgtctggtgtgccgggagccctac
agctgtccccggttgcccaagctgctggcctgccagcatgccttctgcgccatctgcctg
aagctcctgctgtgcgtgcaggacaacacctggtccatcacctgcccgctgtgccgcaag
gtcaccgccgtccccgggggcctcatctgcagcctgcgcgaccatgaggcggtggtgggg
cagctggcccagccatgcacagaggtatcgctctgtcctcaggggctggtggatcctgct
gacttggcagcaggacaccccagcttggtgggagaggatggacaggatgaagtaagtgca
aaccacgtggcagcccggcgcctggccgcgcacctactcctgctggccttgctcattatc
ctcatcgggcccttcatctacccgggtgtcttacgatgggtgctcaccttcatcatcgcc
ctggccctgctgatgtccaccctcttctgctgtctccccagcacccggggcagctgctgg
ccctcctccaggactctcttctgcagagagcagaaacacagccacatctcttccattgcc
tga

>gi568815597r:19714421_19915101|GENSCAN_predicted_peptide_4|90_aa
MTERGGKKDTMFSKCDTEFKEKRREQQWEELAPFMAIWVVEQVSPGWGPGTGADDAVVNN
EFTQDDDDCKYCGPLGSLAQTPNKDIAMEL

>gi568815597r:19714421_19915101|GENSCAN_predicted_CDS_4|273_bp
atgactgaaaggggaggaaagaaagacacaatgttttccaaatgtgatacagaattcaag
gaaaagagaagagagcaacagtgggaagaacttgctccattcatggccatctgggtggtg
gagcaggtgtctccagggtggggtcctggcacaggtgctgatgatgcagttgtaaataat
gagtttacacaggatgacgatgactgcaaatactgtgggccattaggatctctggcacag
acaccaaacaaagacattgctatggagctgtaa

>gi568815597r:19714421_19915101|GENSCAN_predicted_peptide_5|396_aa
MSRKQAAKSRPGSGSRKAEAERKRDERAARRALAKERRNRPESGGGGGCEEEFVSFANQL
QALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIPF
EKHVASLAKPGTFAGNDAIVAFARNHQLNVVIHQLNAPLWQIRGTEKSSVRELHIAYRYG
EHYDSVRRINDNSEAPAHLQTDMLHQDESNKREKIKTKGMDSEDDLRDEVEDAVQKVCNA
TGCSDFNLIVQNLEAENYNIESAIIAVLRMNQGKRNNAEENLEPSGRVLKQCGPLWEEGG
SGARIFGNQGLNEGRTENNKAQASPSEENKANKNQLAKVTNKQRREQQWMEKKKRQEERH
RHKALESRGSHRDNNRSEAEANTQVTLVKTFAALNI

>gi568815597r:19714421_19915101|GENSCAN_predicted_CDS_5|1191_bp
atgtcccgaaagcaggcggcgaagagccggccgggcagcggcagccggaaagccgaggcc
gagcgcaagcgggacgagcgggcggcgcgccgggccctggccaaggagcggcggaatcgg
ccggagtctggcggcggcggcggctgcgaggaggagttcgtcagcttcgccaaccagctg
caggccctggggctgaagctgcgggaggtgccgggggacggcaattgcttgttcagagct
cttggtgatcaattggagggacactcacgaaatcatctcaagcacagacaggagacagtg
gactacatgataaagcagcgggaagattttgaaccctttgtagaagatgacattcctttt
gagaagcatgtggccagtttggcaaagcctggtacttttgctggcaatgatgcaattgta
gcctttgcaagaaatcatcagttgaatgtagtgattcatcaacttaatgcccctttgtgg
cagattcgtggtacagagaaaagcagcgtgagggagttacacatcgcatatcggtatgga
gagcactacgacagtgttcggaggatcaatgacaactcagaggcacctgcacatctccag
acggatatgcttcatcaagatgaatcaaataaaagagaaaagatcaagacaaagggaatg
gactctgaagacgacctgagagatgaagtagaggatgctgtccagaaagtttgtaatgca
actggatgttcagattttaatttaatagtccagaacctggaagctgaaaattataatatt
gaatctgcaataattgccgtgcttcggatgaaccaagggaagagaaataatgcagaagag
aatcttgagcccagtggtcgagtgctgaagcagtgtggccctttgtgggaggagggtggc
agtggtgccagaatctttggaaatcagggcttaaatgaaggcaggaccgaaaacaataag
gcacaggccagccctagtgaagaaaacaaagcaaataaaaaccagctcgcaaaggtcaca
aacaaacagaggcgagaacagcagtggatggagaagaagaagcggcaggaggagaggcac
cgccacaaagccctggagagcagaggtagccacagggacaataacagaagcgaagcagag
gcgaacacgcaggtcaccttggtgaagaccttcgccgctctcaacatctga