GENSCAN 1.0	Date run:  6-Nov-116	Time: 15:29:54

Sequence gi568815597r:110748080_110948936 : 200857 bp : 38.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -     30     25    6                               1.05
 1.08 Term -   2919   2713  207  0  0  112   48   109 0.080   5.66
 1.07 Intr -  29390  29229  162  2  0   27   65    97 0.003   0.55
 1.06 Intr -  30281  30075  207  2  0  105   36    77 0.014   2.55
 1.05 Intr -  35183  35041  143  0  2   65   71    69 0.121   2.05
 1.04 Intr -  35474  35360  115  2  1   46   61   109 0.084   3.10
 1.03 Intr -  40545  40416  130  2  1   40   54    64 0.018  -2.02
 1.02 Intr -  54180  54091   90  2  0   84  113    39 0.931   4.19
 1.01 Init -  59665  59262  404  1  2   60   39   231 0.818  11.55
 1.00 Prom -  73397  73358   40                              -3.65

 2.03 PlyA -  74988  74983    6                               1.05
 2.02 Term -  75197  75024  174  2  0   12   40   150 0.143  -0.62
 2.01 Init -  94718  94635   84  2  0   60   94    63 0.183   4.97
 2.00 Prom -  98057  98018   40                              -3.45

 3.05 PlyA -  98569  98564    6                               1.05
 3.04 Term - 100644  99998  647  1  2   27   38   588 0.998  41.00
 3.03 Intr - 101890 101715  176  0  2  -40    4   203 0.220  -2.24
 3.02 Intr - 105609 105468  142  1  1   89  105    65 0.619   6.79
 3.01 Init - 106426 106369   58  1  1   80   96    26 0.610   4.12
 3.00 Prom - 110096 110057   40                              -3.75

 4.00 Prom + 125864 125903   40                              -4.05
 4.01 Init + 139921 139995   75  0  0   55   94    65 0.576   4.94
 4.02 Intr + 144266 144454  189  1  0   67  109   135 0.965  12.36
 4.03 Intr + 145507 145652  146  0  2   54   74    43 0.265  -2.34
 4.04 Intr + 151237 151420  184  1  1  130   28   134 0.095  10.47
 4.05 Intr + 163106 163212  107  1  2   95   13    75 0.115  -1.21
 4.06 Intr + 163298 163564  267  2  0   37   84   189 0.939   9.12
 4.07 Term + 165778 165964  187  1  1   52   38   129 0.899   0.28
 4.08 PlyA + 166226 166231    6                               1.05

 5.00 Prom + 177572 177611   40                              -6.05
 5.01 Init + 181636 181788  153  0  0   87   97    41 0.430   4.93
 5.02 Term + 186896 187048  153  1  0   33   49   156 0.693   3.14
 5.03 PlyA + 187167 187172    6                               1.05

 6.02 PlyA - 188394 188389    6                               1.05
 6.01 Sngl - 200278 199880  399  1  0   67   38   300 0.726  18.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  66029  66150  122  0  2   59   44   167 0.970   7.06
S.002 Sngl + 156693 157028  336  2  0   90   42   161 0.919   7.48


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:110748080_110948936|GENSCAN_predicted_peptide_1|485_aa
MSEFPFTIASKRIKYLGIHLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPRSWIGRINIV
KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITLP
DFKLYYKATITKTAWWRQEKGFLPRKLDDGESGCSPQTHVFVKKRARICDSEETPRSLDP
ESLVLAVSLPLCGGYIQLQGRKGALEFRVFTCDDQKGKAPALPRIHHMRATESNQTKQQQ
EKGSDEGFLGEKQKRPNFPLRLSGVIDLDMCMLSSLLSDSNKGSGSMAQWSGAQMTVCTL
CLLKPQEESQSRQLCKGLPSVDSGKNTVYSSPLHLSNASIPDLEKSVLARTGERYAQIHL
SFESPCFNYCAVVWHTKIPALLLTQSGKHKCLLADDNTDHHAYSAACQTVGQGLPLLDTL
QNDPGDTEGLCSILANSENSAATRRIVLRLLTGHKTPTHCPLATYSLSDSALPLTLHCLL
EQSSL

>gi568815597r:110748080_110948936|GENSCAN_predicted_CDS_1|1458_bp
atgagtgaattcccattcacaattgcttcaaagagaataaaatacctaggaatccacctt
acaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaattaaa
gaggatacaaacaaatggaagaacattccacgctcatggataggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccacatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacct
gacttcaaactatactacaaggctacaataaccaaaacagcatggtggaggcaggaaaaa
ggtttcttgccaaggaaacttgatgatggggagtctggttgttcacctcaaactcacgta
tttgtgaaaaaacgagccaggatctgtgactctgaggaaacccctagaagcttggaccca
gagagtttggttttagctgtgagtctacccctgtgtggagggtatatccaactccaggga
agaaaaggagctctggagtttagggtttttacctgtgatgatcaaaagggaaaagctcct
gcacttccccgtatacaccacatgagggcgacagagtcaaaccagaccaagcagcagcag
gaaaagggcagtgatgaaggttttctaggagaaaagcagaaaaggcctaacttccctcta
agattgtctggagtaatagatctagatatgtgtatgctctccagtctcctttccgactct
aacaaaggctctggcagtatggcacagtggtcaggagcccagatgacagtatgcacattg
tgcctactgaagccccaggaggagtcacaaagcagacagctctgcaagggcctgccctct
gtggactcggggaagaacactgtgtactcttcccctctccatctcagcaatgcatcaatc
ccagacttggaaaaatcagtgttggcgaggacaggagaaagatatgctcagatacatttg
tcatttgagagcccgtgctttaactactgtgctgttgtgtggcacaccaagatccctgca
ctcctactcacccaatctggcaaacacaagtgcctgcttgcagatgacaacacagatcat
catgcctactcagctgcttgccagacagttggtcagggtctcccattgctggacacatta
caaaatgacccaggagacactgagggcctctgctccatccttgccaattctgagaatagt
gcagccacaaggaggattgttctgaggcttctcacagggcacaaaacccccacgcactgt
cctctggccacctacagcctctctgactctgcactgcctctgaccctgcactgcctgctt
gagcaaagcagtctttga

>gi568815597r:110748080_110948936|GENSCAN_predicted_peptide_2|85_aa
MAIIKKIKITNAGEDMGKEELLHTVGGKVNVKEKTLKEAKEKEKVVYKGNPIGLTVKLSA
ETLQARRDWGPIFSILKEKKFQPRI

>gi568815597r:110748080_110948936|GENSCAN_predicted_CDS_2|258_bp
atggctattatcaaaaagataaaaataacaaatgctggcgaggatatggggaaagaggaa
ctcttacacactgttggtggaaaggtcaatgtgaaagaaaaaaccttaaaggaagctaaa
gagaaggagaaagtcgtttacaaagggaaccccatcgggctaacagtgaaactgtcagca
gaaaccttacaagccagaagagattgggggcctatattcagcatcctgaaagaaaagaaa
tttcaaccaagaatttga

>gi568815597r:110748080_110948936|GENSCAN_predicted_peptide_3|340_aa
MNQRGEVTKEVISFIGSTEGAMSVFEENGNRGMQRKMEAGMQRGRRTKKERKNHLLYALP
ACTVFICFYPEIRHVVHLTKTMSELSLRMNVGGHLSLGLISQPSFFRINLSPSVGKAIIS
PDTGAQRWKRAQREERLKAQQNTDKDVAAHFQASHKPSAEDAEGQSPLSQKYSPSTEKCL
PEIQGIFDRDPDTLLYLLQQKSEPEEPCIGSKAPKDDKTIIEEQATKIADLKRHVEFLVA
ENKRLRKENKQLKAEKARLLKGPIEKELDVDADFVETSELWSLPPHSETATASSTWKKFA
ANTGKAKDIPIPNLPPLDFPSPELPLMELSEDILKGFMNN

>gi568815597r:110748080_110948936|GENSCAN_predicted_CDS_3|1023_bp
atgaaccagaggggtgaagtcacaaaagaagtgatcagtttcatagggtccacagaagga
gcaatgtcagtctttgaggaaaacggaaacagaggaatgcagagaaaaatggaagcagga
atgcaaaggggaaggaggacaaagaaagagaggaagaatcacctactatatgcccttcct
gcatgtactgtgttcatctgcttttatccagaaatacgccacgtggtgcacttgacaaaa
accatgtcagagctgtctctccgcatgaacgtaggaggacacttgagtttgggcctcatt
tctcaaccttcttttttccgtataaacttgagtccctctgtgggcaaagccatcatctcc
cctgatactggtgctcagagatggaaaagggcccagcgtgaagaaagattgaaagcccag
cagaacacagacaaggatgtagctgcccattttcaggcatctcacaaaccctctgcagag
gatgcagagggccagagtcccctttctcagaagtacagcccttccacagagaaatgcctg
cctgagattcaggggatctttgacagggatccagacacactactttatttacttcagcaa
aagagtgagccagaagagccatgtattggaagcaaagcccccaaagatgataaaacaatt
atagaggagcaggcaaccaaaattgcagatttgaagaggcatgtggaattccttgtggct
gagaataaaagattaaggaaagaaaataaacaactgaaggctgaaaaggccagacttcta
aaaggtccaatagaaaaggagctggatgtagatgctgattttgtagaaacgtcagagtta
tggagcttgccaccacattcagaaactgctacagcctcctcaacctggaagaagtttgca
gcaaacaccgggaaagccaaggacattccaatccccaatcttcctcccttggattttcca
tctccagaacttcctcttatggagctctctgaggatattctgaaaggatttatgaataat
taa

>gi568815597r:110748080_110948936|GENSCAN_predicted_peptide_4|384_aa
MKQEIRVESSRCDDKSKKLHDARKEICGCCILGFGIYLLIHNNFGVLFHNLPSLTLGNVF
VIVGSIIMVVAFLGCMGSIKENKCLLMSCWDYRRKPLRPVCMGQLLNWSQEKEFFKKSLF
SDSCQTNGKGWKIADMGSLSYTTREVGVGQAHPISGSKTIFHSLTAAAMSLKVVKLISEH
LLDKRGKDKLDLMAQHQRGKKKPGDYYEQFYAHKLENLEEMDEFLEAYNLPRLKKSPGPE
RFTAEFFQICKEEVVPILLKLLKNIEEEGLFPNSFYKASIILILKPGKDKKKKENLRPIY
LMNTNTKSSTKYEQIESSSKSKSTIHNSKDMESTWMPINSGLDKENVVLIHYGIQHNHKK
EQNYVLCSDMDASGVHYPKQTCLG

>gi568815597r:110748080_110948936|GENSCAN_predicted_CDS_4|1155_bp
atgaagcaggagataagagtggaaagtagcagatgtgatgacaaaagcaagaagttgcac
gatgcaagaaaggagatctgtggctgctgcattttgggctttgggatctacctgctgatc
cacaacaacttcggagtgctcttccataacctcccctccctcacgctgggcaatgtgttt
gtcatcgtgggctctattatcatggtagttgccttcctgggctgcatgggctctatcaag
gaaaacaagtgtctgcttatgtcgtgttgggattataggcgtaagccactgcgcccagtc
tgtatgggtcaactcttaaactggagccaagagaaagaattttttaaaaagtccctcttc
tcagatagttgtcagactaatggcaaaggatggaagatagcagacatggggtccctgtct
tatacaaccagagaagtgggtgttggccaggcacatcccatctcaggcagcaagacaatc
tttcactcactgacggcagcagccatgtctctcaaagtggtgaaactaatatctgagcat
cttttagacaagagaggcaaagacaaactggatttaatggcccaacatcaaaggggaaaa
aaaaaacctggagactattatgaacagttctatgcacacaaactggaaaacctagaagaa
atggatgaattcttagaagcatacaacctcccaagactgaaaaaaagccctggaccagaa
agattcacagctgaattcttccagatatgtaaagaagaggtggtaccaattctactaaaa
ttactcaaaaatattgaggaggaggggctttttcctaactcattctacaaggccagcatc
attctcatactaaaacctggcaaagataaaaagaaaaaagaaaacttaaggccaatatac
ctgatgaacacaaacacaaaatcctcaacaaaatacgagcaaattgaatccagcagcaaa
tcaaaaagcactattcacaatagcaaagacatggaatcaacctggatgcccatcaacagt
ggactagataaagaaaatgtggtacttatacactatggaatacaacacaaccataaaaaa
gaacaaaattatgtcctttgcagcgacatggatgcttctggagtccattatcctaagcag
acttgcttaggataa

>gi568815597r:110748080_110948936|GENSCAN_predicted_peptide_5|101_aa
MDGARGHYPQQTNAGTENQIPHVLTYKWELNDEITWKQRGNNRYWGLPGEKVVQDREKHS
ASLEESEEREQEPLPSNPENSGFVQDRQGSTSMSLQEPQNY

>gi568815597r:110748080_110948936|GENSCAN_predicted_CDS_5|306_bp
atggatggagctagaggccattatcctcagcaaactaacgcaggaacagaaaaccaaata
ccacatgttctcacttataaatgggagctaaatgatgagatcacgtggaaacaaagagga
aacaacagatactggggcctaccaggagagaaggtggttcaggacagagagaaacactct
gcttctttggaagaaagtgaggaaagagaacaggagcctctgcctagtaatccagagaat
tctggatttgtccaagaccgtcaaggcagtacctctatgagtctgcaagaaccacagaat
tactga

>gi568815597r:110748080_110948936|GENSCAN_predicted_peptide_6|132_aa
MDHIKKRKTENAYNAIINGEANVTGSQLLSSILPTSDVSQHNILTSHSKTRQEKRTEMEY
YTHEKQEKGTLNSNAAYEQSHFFNKNYTEDIFPVTPPELEETIRDEKIRRLKQVLREKEA
ALEEMRKKMHQK

>gi568815597r:110748080_110948936|GENSCAN_predicted_CDS_6|399_bp
atggatcacataaagaagagaaaaacagagaatgcttataacgcaatcataaatggggaa
gctaatgtcaccggttcccaactcctaagcagtattttaccaacttcagatgtgtcacaa
cataacattctcacgagtcacagcaaaaccagacaagaaaagagaactgagatggaatac
tatacccatgagaagcaagagaaaggcactttgaattcaaatgcagcttatgaacaaagt
catttcttcaataaaaattataccgaagatattttcccagtgacaccaccggagttagaa
gaaaccattcgagatgaaaaaataagaagacttaagcaggtgctgagagagaaagaagca
gctcttgaagaaatgcgtaagaagatgcaccaaaaataa