GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:01:31

Sequence gi568815597f:9897259_10115829 : 218571 bp : 45.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4508   4676  169  2  1  103   82    88 0.726   9.65
 1.02 Intr +   6105   6147   43  2  1   36   80    43 0.275  -3.89
 1.03 Term +   8533   8609   77  2  2   82   42   120 0.477   4.80
 1.04 PlyA +   9316   9321    6                               1.05

 2.09 PlyA -   9895   9890    6                               1.05
 2.08 Term -  25100  24997  104  0  2   85   42   101 0.887   3.64
 2.07 Intr -  34714  34633   82  1  1   56   97    80 0.981   4.91
 2.06 Intr -  37602  37504   99  0  0  103   83    67 0.990   8.01
 2.05 Intr -  38369  38234  136  1  1   57  119   124 0.804  12.97
 2.04 Intr -  46303  46091  213  0  0   60   96   181 0.828  13.93
 2.03 Intr -  55211  55143   69  1  0  136   38    93 0.520   7.40
 2.02 Intr -  63551  63456   96  1  0  115   87    22 0.418   3.92
 2.01 Init -  64067  64057   11  2  2   67   86    11 0.298  -1.25
 2.00 Prom -  64527  64488   40                              -5.46

 3.00 Prom +  66037  66076   40                              -5.86
 3.01 Init +  74816  74930  115  1  1   67   91    79 0.264   6.49
 3.02 Intr +  78334  78517  184  2  1   53   63   244 0.998  17.25
 3.03 Intr +  83773  83912  140  1  2   66   76    42 0.994   0.91
 3.04 Term +  85043  85443  401  0  2   68   49   313 0.969  20.68
 3.05 PlyA +  87286  87291    6                               1.05

 4.00 Prom +  99710  99749   40                              -4.56
 4.01 Init + 100001 100073   73  1  1   95   82   183 0.776  19.63
 4.02 Intr + 110312 110490  179  0  2   41   93   244 0.784  19.84
 4.03 Term + 151954 152076  123  0  0   47   36   164 0.709   5.48
 4.04 PlyA + 152322 152327    6                              -0.45

 5.08 PlyA - 153298 153293    6                               1.05
 5.07 Term - 157370 157182  189  2  0  -36   48   183 0.093  -0.65
 5.06 Intr - 161729 161469  261  2  0  -11   82   156 0.248   2.78
 5.05 Intr - 162376 162083  294  1  0   43   49   147 0.409   3.51
 5.04 Intr - 163138 163039  100  0  1   81  103     7 0.692   1.61
 5.03 Intr - 163327 163185  143  1  2   34  111    84 0.947   4.45
 5.02 Intr - 165390 165304   87  0  0  106   86    25 0.839   4.27
 5.01 Init - 166832 166683  150  2  0   56  110    87 0.903   7.74
 5.00 Prom - 167825 167786   40                              -9.16

 6.00 Prom + 167881 167920   40                              -4.46
 6.01 Init + 172833 172835    3  2  0  108   81     0 0.563   1.30
 6.02 Intr + 174845 174956  112  1  1   99  115     3 0.563   4.05
 6.03 Intr + 198203 198338  136  0  1   88   93    49 0.404   5.03
 6.04 Intr + 203850 203937   88  0  1   31   81   132 0.400   6.77
 6.05 Intr + 205690 205834  145  0  1   88   97    86 0.985   9.36
 6.06 Intr + 208258 208486  229  2  1   76   68   141 0.992   7.83
 6.07 Intr + 209062 209325  264  1  0   88   36    87 0.494   0.13
 6.08 Intr + 209964 210116  153  0  0   62   69   282 0.722  22.89
 6.09 Term + 211806 211929  124  0  1   89   55    13 0.280  -4.04
 6.10 PlyA + 213245 213250    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:9897259_10115829|GENSCAN_predicted_peptide_1|96_aa
XPCLPNQMLDAAAPPLSLKGQLISTGSATYSDMTRAGENNIAQGYASLSWHPPLTPNKFL
HYNTTMKNGATEDKLHKSMPLKDRVLGYVHSIRNSA

>gi568815597f:9897259_10115829|GENSCAN_predicted_CDS_1|291_bp
nngccttgccttcctaatcagatgctggatgctgctgccccgcccctcagcttgaagggc
cagctgattagcaccgggagtgccacatacagtgacatgacaagggctggtgaaaataac
atcgcacaaggatatgcctcgctgtcctggcaccctcctctcactccaaataagtttcta
cactacaacacaaccatgaaaaatggagccacagaagataaacttcataagagcatgcct
cttaaagaccgtgttcttggctacgtccatagcatccgcaacagtgcctag

>gi568815597f:9897259_10115829|GENSCAN_predicted_peptide_2|269_aa
MEEGCSGPSVTMIHFCLAHTAYRLHCWLLRTHQLRLFYCAVCSDGAIATGTEVDVFCIWT
KSDQFLRGSLRGAYRALTVRRPECYRRSPAARTPASGTSRSHSHWFQGAGSACVQRKCSP
GAVRQASALREELDTDEYEETKKETLEQLSEFNDSLKKIMSGNMTLVDELSGMQLAIQAA
ISQAFKTPEVIRLFAKKQPGQLRTRLAELTADDEAFLSANAGAILSQFEKVSTDLGRPPS
YMNYLLDSHPSKNIDVPSKISFLLKIQDL

>gi568815597f:9897259_10115829|GENSCAN_predicted_CDS_2|810_bp
atggaagaagggtgctctgggcccagtgtcaccatgattcacttttgtttggcccacacg
gcctatcgcttgcactgctggctgctgagaactcaccagctcaggctgttttactgtgca
gtttgttcagatggagccattgccacgggcactgaagtggatgtcttctgcatttggaca
aaaagcgaccagtttctcaggggctccttgcggggagcttaccgcgccctcactgtccgc
cggcccgagtgctaccggagatcaccagcggcccggacgccagcgagtggaacatctcgg
tcgcactctcattggttccagggggccggaagtgcgtgcgtccagcggaagtgctccccc
ggcgcggtccgccaggccagtgccctcagagaggaacttgatacagatgaatatgaagaa
accaaaaaggaaactctggagcaactaagtgaatttaatgattcactaaagaaaattatg
tctggaaatatgactttggtagatgaactaagtggaatgcagctggctattcaggcagct
atcagccaggcctttaaaaccccagaggtcatcagattgtttgcaaagaaacaaccaggt
cagcttcggacaaggttagcagagctgactgcagatgatgaggccttcttgtcagcaaat
gcaggtgctatactcagccagtttgagaaagtctctacagaccttggacggcccccaagt
tacatgaactacctgctagactcacaccccagcaaaaatattgatgtccccagcaagatt
agcttcctgttaaagatccaggacctgtga

>gi568815597f:9897259_10115829|GENSCAN_predicted_peptide_3|279_aa
MENSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGL
IPAYHRVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTL
ERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVAN
YGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLV
PDLVQEYIEKHNLYSSESEDRNAGVILAPLQRNTAEAKT

>gi568815597f:9897259_10115829|GENSCAN_predicted_CDS_3|840_bp
atggaaaattccgagaagactgaagtggttctccttgcttgtggttcattcaatcccatc
accaacatgcacctcaggttgtttgagctggccaaggactacatgaatggaacaggaagg
tacacagttgtcaaaggcatcatctctcctgttggtgatgcctacaagaagaaaggactc
attcctgcctatcaccgggtcatcatggcagaacttgctaccaagaattctaaatgggtg
gaagttgatacatgggaaagtcttcagaaggagtggaaagagactctgaaggtgctaaga
caccatcaagagaaattggaggctagtgactgtgatcaccagcagaactcacctactcta
gaaaggcctggaaggaagaggaagtggactgaaacacaagattctagtcaaaagaaatcc
ctagagccaaaaacaaaagctgtgccaaaggtcaagctgctgtgtggggcagatttattg
gagtcctttgctgttcccaatttgtggaagagtgaagacatcacccaaatcgtggccaac
tatgggctcatatgtgttactcgggctggaaatgatgctcagaagtttatctatgaatcg
gatgtgctgtggaaacaccggagcaacattcacgtggtgaatgaatggatcgctaatgac
atctcatccacaaaaatccggagagccctcagaaggggccagagcattcgctacttggta
ccagatcttgtccaagaatacattgaaaagcataatttgtacagctctgagagtgaagac
aggaatgctggggtcatcctggcccctttgcagagaaacactgcagaagctaagacatag

>gi568815597f:9897259_10115829|GENSCAN_predicted_peptide_4|124_aa
MPADLSGTWTLLSSDNFEGYMLALGIDFATRKIAKLLKPQKVIEQNGDSFTIHTNSSLRN
YFVKFKVGEEFDEDNRGLDNRKCKVLRADYVEMLLEYDEDLVFTFSDLRLQLGTQERNQL
DFKC

>gi568815597f:9897259_10115829|GENSCAN_predicted_CDS_4|375_bp
atgcccgccgacctcagcggtacttggaccctgctcagcagcgacaacttcgagggctac
atgctggccctaggtattgactttgccactcgtaaaatagccaagttgctgaagccacag
aaagtgattgagcagaatggggattcttttaccatccacacgaacagcagcctaaggaac
tactttgtgaaatttaaagttggagaagaatttgatgaagataacagaggcctggacaac
agaaaatgcaaggtactgagggctgactatgtggagatgctgctcgaatatgacgaagac
ctggtctttaccttcagtgacctcaggctgcagctggggacacaggaacgcaaccagcta
gacttcaagtgctaa

>gi568815597f:9897259_10115829|GENSCAN_predicted_peptide_5|407_aa
MSVYGHGEAQTRKTSCNKLMTSCEYHPKTLNLFVKARKTSFEGFKQGNNQERFKVINKKC
IKAAGTAAYACSPNTLGAKENAIHKHSGLIRTFWNQLSWGSQRGNTVMGCITTFQSMSDH
QILLVVRYTKTHCYCTTAHRIQYSYMQYRFVAQEQYLGHTPRFHGFMHSLFVSWELHELN
GLQAPPVQFIDNGNTSGQAQLHDGPFRESLPRLDCARKAAARSLNQHLFPLLDLGNYFFI
PKGQSSDNSVLQTLTEEQAQATAPSRHADLYLALMVLDNSFCFVEASQTLIVPLQEVHQV
ITTGSHIWSVASNTVQGVGIAVFRPEVTQMSKSQPAFLSASQKAQRINMHIEHIKRSKGQ
HHFLKLMKENDQKKKKAKEKGTREAHCVRTNGKKPELLEPITYEFMA

>gi568815597f:9897259_10115829|GENSCAN_predicted_CDS_5|1224_bp
atgagtgtgtatggacatggtgaggcacagacaagaaagacaagctgcaacaagctcatg
acgagctgtgaataccatcctaagacactgaacttgttcgtgaaggcaagaaagacatct
tttgaaggatttaagcaggggaataaccaggaaagatttaaagtgattaacaaaaaatgc
attaaggcggccggtacagcggcttacgcctgcagccccaacactttgggagccaaggaa
aatgccatacataaacattcaggactcatccgaaccttctggaaccagctctcctgggga
agtcagagaggaaatacagtcatgggctgcataacgacatttcagtcaatgtcagatcac
cagatcttactggtggtccgatacacaaaaactcactgttattgtacaactgcccacagg
attcagtatagttacatgcagtacaggtttgtagcccaggagcaatacctaggccatacc
ccacgcttccatggctttatgcacagcctcttcgtctcctgggaactgcatgagctcaat
gggcttcaagctcctcctgttcaattcatagacaatgggaataccagtgggcaggctcag
ctccatgatggccccttccgggagagcctcccaaggctcgactgtgccagaaaagctgct
gccaggagcctcaaccaacacctgtttcccctcctggatctggggaattatttcttcatt
ccaaaagggcagagctctgacaatagtgtccttcagactcttacagaagagcaggcacaa
gctaccgcgcccagccggcatgcagatctttatctggccctcatggttcttgacaacagc
ttctgctttgttgaggccagtcagacccttatagtgccactccaggaggtgcaccaagtc
atcactactgggagccacatctggtcagtggcatccaatactgtccagggggtcggcatt
gctgtcttccgccctgaggtgacacagatgtcaaaatcacagccagcatttctcagtgcc
tcccagaaggctcagagaattaatatgcatattgagcacattaagcgctctaaaggccag
catcatttcctaaaactcatgaaggaaaatgatcagaaaaagaagaaagccaaagagaaa
ggtaccagagaagcacactgtgtgagaaccaatgggaagaagcctgagctgctggaacct
attacctatgaattcatggcataa

>gi568815597f:9897259_10115829|GENSCAN_predicted_peptide_6|417_aa
MRENPPGPPIAASAPGPSQSLGLNVHNMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNS
LETQSQSLSRSQSMDIDGVSCEKSMSQVDVDSGIENMEVDENDRREKRSLSDKEPSSGPE
VSEEQALQLVCKIFRVSWKDRDRDVIFLSSLSAQFKQNPKEVFSDFKDLIGQILMEVLMM
STQTRDENPFASLTATSQPIAAAARSPDRNLLLNTGSNPGTSPMFCSVASFGASSLSSPH
SAASGTAAGSQPSSPRYRPYTVTHPWASSGVSILSSSPSPPALASSPQAVPASSSRQRPS
STGPPLPPASPSATSRRPSSLRISPSMYDNPFSFLFLALSGDSSDEEDEEEDDDDGDGDD
EGGGGGDDFSCVQFGSRRNKMYQVYKNSCKYSWSIVRQMWCQLCPCISPFTPRCSLL

>gi568815597f:9897259_10115829|GENSCAN_predicted_CDS_6|1254_bp
atgagggagaaccctccggggcctcccatagcggcatcagccccaggaccctctcagagt
cttggtctcaatgtccacaacatgaccccagctacctccccaataggtgcatcaggagta
gcccatcgaagccagagcagtgaaggagtcagttctctcagcagctcgccctctaatagc
cttgaaacgcaatctcagtctctctcacgttcccagagcatggatatcgatggtgtctca
tgtgagaaaagcatgtcccaggtggatgtggattcaggaattgaaaacatggaggttgat
gaaaatgatcgaagagaaaagcggagcctcagtgataaggagccttcctcgggccctgaa
gtgtctgaagagcaggccttacagctggtctgtaagatcttccgtgtctcttggaaggac
cgggacagagatgtcatctttctttcttctctttctgcacagtttaagcagaacccaaaa
gaagtattctccgattttaaggacttgattggccagattttaatggaagtgctaatgatg
tccactcagaccagagatgaaaacccatttgccagtctgacagccacatcacagccaatt
gctgcagcagcacggtcaccagacagaaatctcttgctaaacactggctccaatccagga
acaagccccatgttctgcagcgtggcttcctttggtgccagctctttgtctagtcctcac
agtgcagcctctggaactgctgcgggaagccagccttcatccccgcggtatcgcccctac
actgtcactcacccatgggcgtcctcaggcgtctccattctgtcgagctccccaagtccc
cctgccctcgccagtagcccccaagcagtgcccgccagcagttccagacagaggcccagc
agcacgggtccacccctaccacccgcctcacccagtgccacgagcagacgcccctcctcc
ctgaggatctctcctagtatgtacgacaatcctttctccttcctcttcctcgcactttct
ggggacagtagtgatgaagaagatgaagaagaagatgatgatgatggtgatggtgatgat
gaaggtggtggtggtggtgatgatttttcttgtgtccagtttgggtccaggaggaataaa
atgtaccaagtgtataaaaatagctgcaaatactcatggagcattgtgcgccagatgtgg
tgtcagctctgtccatgtatcagcccctttactcctcgctgtagcctgctgtga