GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:31:31

Sequence gi568815597f:84379282_84597467 : 218186 bp : 38.31% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.10 PlyA -   1604   1599    6                               1.05
 1.09 Term -  24237  24169   69  0  0   92   42   127 0.620   5.46
 1.08 Intr -  25157  24883  275  0  2   63   26   285 0.411  16.13
 1.07 Intr -  27327  27285   43  0  1  105  116    -2 0.418   1.19
 1.06 Intr -  32774  32698   77  0  2   87   91    88 0.908   7.32
 1.05 Intr -  33318  33201  118  0  1   30   65    82 0.867  -0.78
 1.04 Intr -  34706  34525  182  0  2   51   73   178 0.900  11.27
 1.03 Intr -  37864  37813   52  1  1   69  127    42 0.107   3.76
 1.02 Intr -  48611  48447  165  2  0   89   85   106 0.016   9.64
 1.01 Init -  54219  54097  123  0  0   96  -39   116 0.021  -0.08
 1.00 Prom -  61757  61718   40                              -3.65

 2.00 Prom +  63062  63101   40                              -4.05
 2.01 Sngl +  64829  65164  336  1  0   52   41   261 0.966  13.58
 2.02 PlyA +  65215  65220    6                               1.05

 3.00 Prom +  69483  69522   40                              -4.35
 3.01 Init +  76389  76462   74  2  2   87   92    21 0.509   2.99
 3.02 Intr +  77930  77995   66  2  0   88   56    85 0.345   2.40
 3.03 Intr +  84046  84216  171  1  0  107   -6   106 0.511   1.24
 3.04 Term +  84421  84688  268  1  1   18   49   226 0.386   5.68
 3.05 PlyA +  85737  85742    6                               1.05

 4.00 Prom +  92462  92501   40                              -5.35
 4.01 Init + 100001 100432  432  1  0   95   39   416 0.567  33.66
 4.02 Intr + 101675 101731   57  1  0   93   94    53 0.858   4.56
 4.03 Intr + 103634 103714   81  1  0   90   80   147 0.971  13.02
 4.04 Intr + 110352 110447   96  2  0  133   49    84 0.992   8.29
 4.05 Intr + 111038 111191  154  1  1   94    7   134 0.636   4.62
 4.06 Intr + 116092 116174   83  2  2   58  115    59 0.988   4.04
 4.07 Intr + 116601 116782  182  2  2   90   94    40 0.987   2.54
 4.08 Intr + 116963 117089  127  2  1   80   95    77 0.950   7.36
 4.09 Intr + 126757 126844   88  0  1   22   72    98 0.014   0.22
 4.10 Intr + 127119 127137   19  1  1  107   94     0 0.044  -2.75
 4.11 Intr + 143109 143226  118  0  1   27  103   111 0.864   6.05
 4.12 Term + 146564 146845  282  1  0   87   43   159 0.926   5.74
 4.13 PlyA + 146993 146998    6                               1.05

 5.00 Prom + 153500 153539   40                              -2.05
 5.01 Init + 164825 165023  199  1  1   41  106    86 0.891   4.81
 5.02 Intr + 166353 166478  126  1  0   53   58    72 0.563   0.43
 5.03 Intr + 169505 169683  179  0  2  101   62   154 0.968  12.82
 5.04 Intr + 171151 171249   99  0  0   72   86    43 0.750   1.89
 5.05 Intr + 176629 176698   70  0  1   72   90    67 0.030   3.14
 5.06 Term + 182387 182490  104  0  2   53   44   102 0.010  -0.24
 5.07 PlyA + 182525 182530    6                               1.05

 6.13 PlyA - 182659 182654    6                               1.05
 6.12 Term - 183115 183101   15  1  0   99   43     1 0.352  -6.04
 6.11 Intr - 184137 183964  174  0  0   93   88   116 0.643  11.31
 6.10 Intr - 184551 184454   98  1  2   59   75    79 0.999   2.51
 6.09 Intr - 186731 186560  172  2  1   61   99   113 0.694   8.29
 6.08 Intr - 190858 190650  209  2  2   65   98   121 0.999   8.67
 6.07 Intr - 191439 191301  139  0  1   94   95   134 0.999  13.82
 6.06 Intr - 195172 194958  215  2  2   41   60   341 0.091  24.11
 6.05 Intr - 195473 195407   67  2  1   54   66    80 0.051  -0.04
 6.04 Intr - 203077 202997   81  1  0   83   74    81 0.120   5.12
 6.03 Intr - 204599 204446  154  1  1    9   86   143 0.553   5.35
 6.02 Intr - 210116 210080   37  0  1   32  115    38 0.053  -2.70
 6.01 Intr - 217254 217150  105  1  0   82  103   100 0.121  10.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  44755  44999  245  0  2   51   80   225 0.848  15.25
S.002 Term +  48437  48671  235  2  1   43   49   142 0.885   0.61
S.003 Term + 176629 176736  108  0  0   72   42   106 0.864   1.93


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:84379282_84597467|GENSCAN_predicted_peptide_1|367_aa
MVSFSDSAGAKPIKRGWQHRQQGASGNRALIWLLLCDLGQNSPDGKMVGLACLRSYWAEE
WTEVGCKSDFLDIGKQLACSMYQSLLGHQTLLHLTEVLQQGVTITKIYQHPYHGVTHGSG
KEFGEDTIHVSVIKDLELTEFDGLIEGSEKEEMGSDWVTMQNTRKSRFVGDDDASVQQQN
YTACCLMMVFHTVKKRIRLCKMEEFLSLGRLKCDELTENLHHTPKIMKFVIDEIDIRTQN
QSLKTLHVAGFTKGKAMKAIKPKTIHSCWKNLCSDVEHDFTGFMTESIKKVMKEIVDMAR
KVGGDGFQDMIPGEIQKLIDTTLEKLTEHNSMEPEPDDEQEDIEELTQQEDDKDEDTYDD
PFPLNEE

>gi568815597f:84379282_84597467|GENSCAN_predicted_CDS_1|1104_bp
atggtgtccttctcagactcagctggagcaaagcctatcaagcgagggtggcagcatcgt
caacagggagcatcgggcaaccgggctctcatctggcttctgctctgtgatctcggacag
aacagccctgatgggaagatggttggactggcctgcctccgttcctactgggccgaggaa
tggactgaggttggctgcaagtctgactttttggatatagggaaacaactggcttgcagc
atgtaccagtctctccttggtcaccagacactgctccatctcacagaggttctacaacaa
ggagttaccatcaccaaaatataccaacacccctaccacggtgtgacccatggcagtggc
aaagagtttggagaagatacaatacatgtgagtgttattaaggatctggaactgactgaa
tttgatggtttgatagaagggtcagaaaaagaagagatggggagtgactgggtaactatg
cagaatacaagaaaaagtagatttgtaggggatgatgacgcatcagttcaacagcagaat
tatacagcatgttgtttgatgatggtctttcataccgtcaagaaaagaatccgactttgc
aaaatggaggaatttttgtccctgggccgactgaagtgtgatgaattaactgagaattta
catcacacacccaagattatgaagtttgtaattgatgaaattgatattcgaacccagaac
caatcactcaagacattgcatgtggcaggttttactaaaggaaaagccatgaaagccatc
aagcccaaaacaatacattcctgctggaaaaatctgtgttcagatgttgagcatgacttc
acaggatttatgacagagtcaatcaagaaagtcatgaaagagattgtggatatggcaaga
aaggttgggggtgatggatttcaagatatgattcctggagaaattcaaaagctaatagac
accacactagagaaattaacagaacataactcaatggaaccagagccagatgatgagcaa
gaagacatagaagagctgactcaacaggaagatgacaaggatgaagacacttatgatgat
ccatttccacttaatgaagagtga

>gi568815597f:84379282_84597467|GENSCAN_predicted_peptide_2|111_aa
MRKNQYKKAENSKNQNTSSPKDHNSSSAREQTWTESEFDEFTEVGFRRWVITNSSELKEH
VLTQCKEVKTLEKRLEELLTRITSLEKNINDLMELKNTARELSEAYTSINS

>gi568815597f:84379282_84597467|GENSCAN_predicted_CDS_2|336_bp
atgaggaaaaaccagtacaaaaaggctgaaaattccaaaaaccagaacacctcttctcca
aaggatcacaactcctcatcagcaagggaacaaacctggacagagagtgagtttgacgaa
ttcacagaagtaggcttcagaaggtgggtaataacaaactcctccgagctaaaggagcat
gttctaacccaatgcaaggaagttaagacccttgaaaaaaggttagaggaattgctaact
agaataaccagtttagagaagaacataaatgacctgatggagctgaaaaacacagcacga
gaacttagtgaagcatacacaagtatcaacagctga

>gi568815597f:84379282_84597467|GENSCAN_predicted_peptide_3|192_aa
MNKNTKWSYRVQNISYLHHEDSGKRLVAKGEEKESEEGLQVLRAKQIIAIKAPKLKTIYI
KEPPSFKENQWATERQQNWRSSSKHQSPILSSSLLRYLHIMCCTRKTSIGEQKEVAPVEM
LLGLEQDAWIFQKTLKKKAKLEVNCWYLPKGAVHQVMGPQHQEAREHIAKEGVRRGGLSR
IRELCRGPCMAS

>gi568815597f:84379282_84597467|GENSCAN_predicted_CDS_3|579_bp
atgaacaagaatacaaagtggtcctatagggtccagaatataagttacctccatcatgag
gatagtggtaagaggttggtggctaagggagaagagaaggagagtgaagaaggtctacag
gttctgagagcaaagcaaataattgccatcaaagctccaaagctgaagacaatatacatc
aaggaacccccatcatttaaagagaaccagtgggctactgagaggcaacagaactggcgt
tcctcctccaagcatcagtctcccatcctttcctcctccctactgcgttatctacatatt
atgtgttgtacgagaaaaacaagtattggagaacaaaaagaagtggcaccagttgagatg
ctacttggattggagcaagatgcttggattttccagaagacactgaagaagaaagccaag
cttgaagttaattgctggtacctgcccaagggggctgtgcaccaagtgatgggaccccaa
caccaagaggctagggagcacattgctaaggaaggtgtcagaagaggtggcctgtcccgc
ataagggaactgtgcagaggcccttgtatggcttcctga

>gi568815597f:84379282_84597467|GENSCAN_predicted_peptide_4|572_aa
MAKAGDKSSSSGKKSLKRKAAAEELQEAAGAGDGATENGVQPPKAAAFPPGFSISEIKNK
QRRHLMFTRWKQQQRKVRERRGLPGACALFLTLRAVAGRTSVVVCWSQKCSLWLRGKGGV
AAHVFWSPRPSLETLGSAFCLSVKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYD
ETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHV
YYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEI
KRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRF
HRYIFRSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPELLNHFLHSGDAGGA
RHGARDGRADSWVEGPIRERVSPQLTLRALRERLGEFLGEDAIAEKFLFLKCIGNNLAVA
LQPELYLLPVMDHLGNVYSPSTVILDERQTNNGVNEADGTIHRPISVTLFKEELGRDPSL
LENTLKELPNKNQEEGDFKLEWEKERGYYSTF

>gi568815597f:84379282_84597467|GENSCAN_predicted_CDS_4|1719_bp
atggcgaaagccggggataagagcagcagcagcgggaagaaaagtctaaaacggaaagcc
gctgccgaagaacttcaggaggctgcaggcgctggggatggggcgacggaaaacggggtc
caacccccgaaagcggctgcctttccgccaggctttagcatttcggagattaaaaacaaa
cagcggcgacacttaatgttcacgcggtggaaacagcagcagcggaaggtacgcgagagg
cgggggctgccgggcgcttgcgcgttgttcctgacgcttagggcggtcgcggggcgcaca
tctgtggttgtctgctggtctcaaaagtgttctctgtggctccgtgggaagggtggcgtc
gcggcccacgtgttctggtcccctcgccctagtttggagactctaggttcagccttttgc
ctgagcgtcaaggaaaagttggcagctaagaaaaaacttaaaaaagaaagagaggctctt
ggcgataaggctccaccaaagcctgtacccaagaccattgacaaccagcgagtgtatgat
gaaaccacagtagaccctaatgatgaagaggtcgcttatgatgaagctacagatgaattt
gcttcttacttcaacaaacagacttctcccaagattctcatcacaacatcagatagacct
catgggagaacagtacgactctgtgaacagctctccacagttataccaaactcacatgtt
tattacagaagaggactggctctgaaaaaaattattccacagtgcatcgcaagagatttc
acagacctgattgttattaatgaagatcgtaaaaccccaaatggacttattttgagtcac
ttgccaaatggcccaactgctcattttaaaatgagcagtgttcgtcttcgtaaagaaatt
aagagaagaggcaaggaccccacagaacacatacctgaaataattctgaataattttaca
acacggctgggtcattcaattggacgtatgtttgcatctctctttcctcataatcctcaa
tttatcggaaggcaggttgccacattccacaatcaacgggattacatattcttcagattt
cacagatacatattcaggagtgaaaagaaagtgggaattcaggaacttggaccacgtttt
accttaaaattaaggtctcttcagaaaggaacctttgattctaaatatggagagtatgaa
tgggtccataagccggagctgttgaaccactttcttcatagcggcgacgctggaggagcc
agacatggtgcacgcgacggccgggccgattcgtgggtcgaggggccgattagggagaga
gtatctcctcaacttactttacgagccctgagggagcgtcttggtgagttcctgggtgaa
gatgctattgcagaaaaatttttatttctgaaatgcattggaaataatttagctgtggct
cttcaaccagaattatatttgcttcctgtaatggaccatttaggaaatgtttattcacca
tcaacagttattttagatgagcggcagactaataatggtgttaatgaggctgatggaaca
atccacagaccaattagtgtaactttgttcaaggaggaacttggaagagatcccagtttg
ttagaaaacactttgaaagagcttcctaacaagaatcaggaagaaggtgattttaaactg
gaatgggaaaaagaaagaggctattatagtacattttag

>gi568815597f:84379282_84597467|GENSCAN_predicted_peptide_5|258_aa
MHFWFALSNTYGQVKKECDSVADLTHFHVCLQTAEKEYITLPDHPSLPCQPVLSSGITDI
SLLQTEREKIIKQMKQVKEERRYLERNREELVKTVEKLFEQSKLKRYHAYNGWKKKYLET
KKVTASMEEVLTKLREDLELYYKKLLMQLEAREIKMRPKNLANITDSKNYLIIQITEVQH
AIDQLKRKLDTDKMKLIVEVKLLEVCLARRSTEDFVYDESAKSKEIAIATPTFSNHHPDQ
SAAINDKARHSSSKQVIT

>gi568815597f:84379282_84597467|GENSCAN_predicted_CDS_5|777_bp
atgcatttctggtttgcattatcaaatacctacgggcaagtgaaaaaagaatgtgacagt
gtagccgatcttactcattttcacgtttgcttacagacagctgaaaaagagtacatcacc
ctaccagatcacccttcacttccttgtcaacctgttctttcttcaggaataactgatata
tctttattacaaactgaaagagagaagattatcaaacaaatgaaacaagtaaaggaagaa
agaaggtatctggaaagaaatagagaagaactagtaaaaacggttgaaaagctatttgaa
caaagcaaattaaaacgatatcatgcctacaatggttggaagaaaaaatacttggaaaca
aagaaagtcacagcatcaatggaggaggttttaacaaaacttcgagaagatttggaactc
tactataaaaaactgctcatgcaacttgaagccagggagatcaagatgagaccaaagaat
ctggcaaacatcacagactccaagaattacctaataatccagatcactgaggtacagcat
gcaattgaccagcttaagagaaaactagatactgacaaaatgaaactcatagtagaagtt
aagttgctagaagtgtgcctggctaggaggtctacagaagattttgtttatgatgaatca
gccaagtcaaaagaaattgccatagccaccccaaccttcagcaaccaccaccctgatcag
tcagcagccatcaatgacaaggcaagacactcttccagcaagcaggttataacttga

>gi568815597f:84379282_84597467|GENSCAN_predicted_peptide_6|488_aa
XFCHVRMWHKGAIWEQKLDPHQTPDLPEFKSIRGHGLFDKVQLFILAREGPAARKYRLVH
IRPDHREMVKVRQRNSDFTQEFLLVLKQENEKWPQGIRKDPLVLMNGVIHKPEDLVETSV
LTHHIPTPQGVHDQPRQNEMQTIGRTINGGRNPLRPARPAAMSRPQLRRWRLVSSPPSGV
PGLALLALLALLALRLAAGTDCPCPEPELCRPIRHHPDFEVFVFDVGQKTWKSYDWSQIT
TVATFGKYDSELMCYAHSKGARVVLKGDVSLKDIIDPAFRASWIAQKLNLAKTQYMDGIN
IDIEQEVNCLSPEYDALTALVKETTDSFHREIEGSQVTFDVAWSPKNIDRRCYNYTGIAD
ACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYNDYIKMSINPKKLVMGVPWYGYDYT
CLNLSEDHVCTIAKVPFRGAPCSDAAGRQVPYKTIMKQINSSISGNLWDKDQRAPYYNYK
VRLFRALV

>gi568815597f:84379282_84597467|GENSCAN_predicted_CDS_6|1467_bp
nccttctgccatgtgaggatgtggcacaaaggtgccatttgggagcagaaactggaccct
caccagacaccagacctgccagagtttaagagcattagaggccacggtttatttgataaa
gtccagttgttcatccttgcaagagaagggcctgcagcgcggaaatacagacttgtccac
attaggccagatcacagagaaatggtaaaagtccggcagaggaattcggacttcactcag
gagttcctgctggttctgaagcaggaaaatgagaagtggcctcagggaattagaaaggat
ccactggtgttgatgaatggagtaatccacaagccggaggatctggtggaaacatcggtg
ctcacacatcacattccgactccacaaggagtacacgaccagccacgacaaaacgagatg
cagactattgggaggactataaacggcggtaggaacccactccggcccgctagacctgct
gctatgtcccggccgcagcttcgacgctggcgcctcgtctctagcccgccgagcggcgtc
ccgggtctagcgctgctggcgctgctggcgctgctggcgctgcggctcgcggccgggacc
gactgcccatgcccggagcctgagctctgccgcccgattcgccaccatccagatttcgag
gtctttgtgtttgatgttggacagaaaacttggaaatcttatgattggtcacagattaca
actgtggcaacatttggaaaatatgactcagaacttatgtgctacgctcattcaaaagga
gccagagtagtacttaaaggagatgtatccttaaaggatatcattgatcctgctttcaga
gcatcctggatagctcaaaaacttaatttggccaaaacacaatatatggatggaattaat
atagatatagagcaagaagttaattgtttatcacctgaatatgatgcattaactgcttta
gtcaaagaaactacagactctttccatcgtgaaattgagggatcacaggtaacctttgat
gtagcttggtctccaaagaacatagacagaagatgctataattatactggaatcgcagat
gcttgtgacttcctctttgtgatgtcttatgatgaacaaagtcagatctggtcagaatgt
attgcagcagccaatgctccctataatcagacattaactggatataatgactacatcaag
atgagcattaatcctaagaaacttgtaatgggtgttccttggtatggttatgattatacc
tgcctgaatctgtctgaggatcatgtttgtaccattgcaaaagtccctttccggggggct
ccttgtagtgacgctgcaggacgtcaggtgccctacaaaacgatcatgaagcaaataaat
agttctatttctggaaacctatgggataaagatcagcgggctccttattataactataaa
gtaagacttttcagagctttagtgtag