GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:24:04

Sequence gi568815597f:51959848_52186755 : 226908 bp : 43.35% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    224    295   72  1  0   75   97    31 0.755   3.87
 1.02 Intr +    777    937  161  2  2   76   89    36 0.692   1.29
 1.03 Term +   7033   7072   40  1  1  119   49    33 0.223  -0.84
 1.04 PlyA +   7471   7476    6                               1.05

 2.09 PlyA -   8608   8603    6                               1.05
 2.08 Term -  10354  10313   42  1  0   51   49    61 0.106  -4.34
 2.07 Intr -  17270  16974  297  2  0   85   59   447 0.019  38.57
 2.06 Intr -  38191  38102   90  1  0   81   85    30 0.084   2.19
 2.05 Intr -  38717  38689   29  0  2   73   92    16 0.050  -1.67
 2.04 Intr -  63727  63644   84  2  0   81   75    92 0.926   6.99
 2.03 Intr -  64732  64663   70  1  1   58   82    59 0.625   1.05
 2.02 Intr -  67501  67428   74  2  2   80   94    29 0.574   1.83
 2.01 Init -  68770  68731   40  1  1   56  115    -7 0.572  -0.84
 2.00 Prom -  69876  69837   40                              -3.26

 3.03 PlyA -  70094  70089    6                               1.05
 3.02 Term -  74039  72850 1190  0  2   50   47  1249 0.167 108.91
 3.01 Init -  95249  95153   97  2  1   88   36   150 0.473   8.27
 3.00 Prom -  97681  97642   40                              -6.36

 4.00 Prom +  98191  98230   40                              -8.16
 4.01 Init + 100001 100054   54  1  0   67  113    43 0.470   5.98
 4.02 Intr + 104978 105091  114  1  0  104   64    67 0.600   6.54
 4.03 Intr + 123493 123694  202  0  1   48  100    91 0.160   5.16
 4.04 Intr + 126265 126324   60  2  0   38  111   120 0.989   8.01
 4.05 Intr + 181930 182556  627  2  0   63  105   357 0.305  27.08
 4.06 Term + 199476 199558   83  1  2   50   49   108 0.019   0.96
 4.07 PlyA + 200904 200909    6                               1.05

 5.04 PlyA - 201192 201187    6                               1.05
 5.03 Term - 202560 202406  155  1  2   16   43   101 0.094  -3.52
 5.02 Intr - 203499 203384  116  2  2   34   93   113 0.547   6.49
 5.01 Init - 213592 211812 1781  1  2   37   53   469 0.337  26.99
 5.00 Prom - 214865 214826   40                              -4.96

 6.02 PlyA - 215034 215029    6                               1.05
 6.01 Sngl - 216269 215487  783  2  0   79   50   470 0.836  38.27
 6.00 Prom - 219893 219854   40                              -7.06

 7.00 Prom + 219934 219973   40                              -8.06
 7.01 Sngl + 220138 220575  438  0  0   56   48   354 0.999  24.46
 7.02 PlyA + 222897 222902    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  73914  72850 1065  0  0   71   47  1179 0.825 109.25
S.002 Init + 123499 123694  196  0  1   77  100    87 0.820   7.89
S.003 Term + 126865 126911   47  2  2  124   42    39 0.933   0.27


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:51959848_52186755|GENSCAN_predicted_peptide_1|90_aa
MEGKPEGRECHRAAAVQGGEQESKQHIRQVPSRLGESPALDGNWTSSGAEHCCSLHPLKM
GVKGPQLTTNFSVDDSALSPAYTQDEIAPS

>gi568815597f:51959848_52186755|GENSCAN_predicted_CDS_1|273_bp
atggagggcaagcctgagggcagggagtgccaccgggcagctgcagtccaagggggagaa
caggaatctaagcaacacatcaggcaggttccaagcaggctaggagaatctccagcctta
gatggcaactggacgtcttcaggggcagagcactgctgctctctccatccattgaaaatg
ggagtaaaagggccacaactcacaactaatttctctgttgatgactccgccttgtctcca
gcttacactcaagacgagattgcaccttcctga

>gi568815597f:51959848_52186755|GENSCAN_predicted_peptide_2|241_aa
MVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILF
LDPSGKVHPEIINENGNPSYKYFYVSAEQAGVREIFASWIPPLLTVCALAMEQCPCCRFE
PLSPRKQQLMASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAF
VSTVGIDFKVKTVYRHEKRVKLQIWVSPGNLGQDFPEKRLACQYKGLERLSGADQENNPE
D

>gi568815597f:51959848_52186755|GENSCAN_predicted_CDS_2|726_bp
atggtgattattcataaatcctggtgtggagcttgcaaagctctaaagcccaaatttgca
gaatctacggaaatttcagaactctcccataattttgttatggtaaatcttgaggatgaa
gaggaacccaaagatgaagatttcagccctgacgggggttatattccacgaatccttttt
ctggatcccagtggcaaggtgcatcctgaaatcatcaatgagaatggaaaccccagctac
aagtatttttatgtcagtgccgagcaagcaggtgttcgggagatatttgctagctggatt
ccacccctgctgacagtgtgtgccctggcgatggagcagtgtccttgttgcagatttgaa
ccactttcacctcgtaaacagcagctgatggcttcagtgacagatggtaaaactggagtc
aaagatgcctctgaccagaattttgactacatgtttaaactgcttatcattggcaacagc
agtgttggcaagacctccttcctcttccgctatgctgatgacacgttcaccccagccttc
gttagcaccgtgggcatcgacttcaaggtgaagacagtctaccgtcacgagaagcgggtg
aaactgcagatctgggtgagtcccgggaatcttgggcaggattttcctgagaagcggctg
gcctgccagtacaagggcttagagaggctgtctggtgctgatcaagagaacaatccagag
gattga

>gi568815597f:51959848_52186755|GENSCAN_predicted_peptide_3|428_aa
METRPRLGATCLLGFSFLLLVISSDGHNGLGKETRGSVKVKGDRKSSLHFRLTSETRTTR
KLAQRGCQWSLPERMPLVVFCGLPYSGKSRRAEELRVALAAEGRAVYVVDDAAVLGAEDP
AVYGDSAREKALRGALRASVERRLSRHDVVILDSLNYIKGFRYELYCLARAARTPLCLVY
CVRPGGPIAGPQVAGANENPGRNVSVSWRPRAEEDGRAQAAGSSVLRELHTADSVVNGSA
QADVPKELEREESGAAESPALVTPDSEKSAKHGSGAFYSPELLEALTLRFEAPDSRNRWD
RPLFTLVGLEEPLPLAGIRSALFENRAPPPHQSTQSQPLASGSFLHQLDQVTSQVLAGLM
EAQKSAVPGDLLTLPGTTEHLRFTRPLTMAELSRLRRQFISYTKMHPNNENLPQLANMFL
QYLSQSLH

>gi568815597f:51959848_52186755|GENSCAN_predicted_CDS_3|1287_bp
atggagacgcggcctcgtctcggggccacctgtttgctgggcttcagtttcctgctcctc
gtcatctcttctgatggacataatgggcttggaaaggaaacaagagggtctgtaaaagtc
aagggagacaggaagagcagtttgcacttccggcttacgtcggagacgcgtacaacccgg
aagttggcgcagcgcggttgccaatggtcgctccctgagaggatgccgctcgtggtgttt
tgcgggctgccgtacagcggcaagagccggcgtgctgaagagttgcgcgtggcgctggct
gccgagggccgcgcggtgtacgtggtggacgacgcagctgtcctgggcgcagaggaccca
gcggtgtacggcgattctgcccgtgagaaggcattgcgtggagctctgcgagcctccgtg
gaacggcgcctgagtcgccacgacgtggtcatcctggactcgcttaactacatcaaaggt
ttccgttacgagctctactgcctggcacgggcggcgcgcaccccgctctgcctggtctac
tgcgtacggcccggcggcccgatcgcgggacctcaggtggcgggcgcgaacgagaaccct
ggccggaacgtcagtgtgagttggcggccacgcgctgaggaggacgggagagcccaggcg
gcgggcagcagcgtcctcagggaactgcatactgcggactctgtagtaaatggaagtgcc
caggccgacgtacccaaggaactggagcgagaagaatccggggctgcggagtctccagct
cttgtgactccggattcagagaaatctgcaaagcatgggtccggtgccttttactctccc
gaactcctggaggccctaacgctgcgctttgaggctcccgattctcggaatcgctgggac
cggcctttattcactttggtgggcctagaggagccgttgcccctggcggggatccgctct
gccctgtttgagaaccgggccccaccaccccatcagtctacgcagtcccagcccctcgcc
tccggcagctttctgcaccagttggaccaggtcacgagtcaagtactggccggattgatg
gaagcgcagaagagcgctgtccccggggacttgctcacgcttcctggtaccacagagcac
ttgcggtttacccggcccttgaccatggcagaactgagtcgccttcgtcgccagtttatt
tcgtacactaaaatgcatcccaacaatgagaacttgccgcaactggccaacatgtttctt
cagtatttgagccagagcctgcactga

>gi568815597f:51959848_52186755|GENSCAN_predicted_peptide_4|379_aa
MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI
KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF
PRQVLDSKAPKPEDIDEEDDDVPGAGPSDKNVHVSSGENEKVLGSGGGGERQGLVGTEGL
PVPGKRSPGPAAGRGLRREHGALAAPRPRSLAFPAARAQRGRRSPDAVAGRGVQGALWPS
GAGGRSGHPTLEASLRIPACRTSVVPPQPCAPGPARRRSSGIRVAAAARAPMRLGGCRAL
AAVAAAAAATAAPTGVGGFAAAPGAAPVPSGGGFRLRDDPRGHAEAEAAAARVNFWYQLC
QFESFRKQLLRQDYKRYMK

>gi568815597f:51959848_52186755|GENSCAN_predicted_CDS_4|1140_bp
atgaatcaagaaaagttagccaaacttcaggctcaggtccggatagggggcaagggtaca
gctcgcagaaagaagaaggtggtacatagaacagccacagctgatgacaaaaagcttcag
agttctctaaaaaaactggctgtgaataatatagctggtattgaagaggtgaacatgatt
aaagatgatgggacagttattcatttcaacaatcccaaagtccaagcttccctttctgct
aatacctttgcaattactggtcatgcagaagccaaaccaatcacagaaatgcttcctgga
atattaagtcagcttggtgctgacagtttaacaagccttaggaagttagctgaacagttc
ccacggcaagtcttggacagtaaagcaccaaaaccagaagacattgatgaggaagatgat
gatgttccaggtgcgggtccgagtgacaagaacgttcacgtatcttcgggagagaacgaa
aaggtgctcgggtctggcgggggcggggaacgccaggggttggtgggaactgaggggctt
ccggttcccgggaagcggagtcccgggccggccgcgggccgcgggctacgcagggagcac
ggggccctcgccgcccccaggccgcgctccttagcgttccctgcggctcgtgcccagcgc
ggccgccgcagtcccgacgccgtagccggacgtggggtccagggggcgctgtggcccagc
ggcgccggcggcaggagcggccacccgacgctggaggcttcgctgaggatccccgcctgc
cgcacctcggtcgtcccgccgcagccttgcgcccccggcccggctcggcggcgctcctcc
gggatccgcgtggctgccgcggcccgggcgccgatgcggctgggcgggtgccgggcctta
gcagcagtagcagccgcagctgcggctaccgcagctcctacaggagtgggaggtttcgcg
gcggcgcctggggccgcgccggtgccctccggaggaggctttcggctcagggacgacccc
cgtggccatgctgaagcggaggcggccgctgctcgagtcaatttctggtaccagctgtgc
cagtttgagtccttcaggaagcagctgctgagacaggactataagagatacatgaagtag

>gi568815597f:51959848_52186755|GENSCAN_predicted_peptide_5|683_aa
MNIDAKILNKILANQIQQHIKKLIHHDQVGFIPGMQDQFNISKSINVIQHINRTKDKNHM
IISVDAEKAFDKIQQHFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKT
GTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFVDDMIVYLENPIVSA
QNLLKLISNFGKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTR
DVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGTINTVKMAILPKVIYRFNAIPIKLPMT
FFTELEKTTLKFIRNQKRARITKSILSQKNKAGGIMLPDFKLYYKATVTKTAWYWYQNRD
IDQWNRTEPSEITPHIYNYLIFDKSEINKQWGKDSLFNKWCWENWLAICRKLKLDPFLTS
YKKFNSRWTKDLNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIK
LKSFCTAKETTIRVNRQPTKWKKIFATYSSDKELISRIYNEHKQIYKKKTNNPIKKQAKD
MNRHFSKEDIYVAKRHMKKCSSSLAIREMQIKTTMRYHLIPVRMAIIKKSGNNSSGEHLI
DMSDVEENNFKGIVNVHEETEEFFPKMLKINQGIYMGRTHSGGGGGGGKGGSGGGHRRRD
SYYDRGYHRGYDRYEDYDYRYRR

>gi568815597f:51959848_52186755|GENSCAN_predicted_CDS_5|2052_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaagaccagttcaat
ataagcaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatg
attatctcagtagatgcagaaaaagcctttgacaaaattcaacaacacttcatgctaaaa
actctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctatgac
aaaccaacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgtagatgacatgattgtatatctagaaaaccccattgtctcagcc
caaaatctccttaagctgataagcaacttcggcaaagtctcaggatacaaaatcaatgta
caaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacttaggaatccaacttacaagg
gacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggat
acaaacaaatggaagaacattccatgctcatgggtaggaacaatcaataccgtgaaaatg
gccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactactttaaagttcataaggaaccaaaaaagagcccga
atcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgacttc
aaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaatagagat
atagatcaatggaacagaacagagccctcagaaataacgccgcatatctacaactatctg
atctttgacaaatctgagataaacaagcaatggggaaaggattccctatttaataaatgg
tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacatct
tataaaaaatttaattcaagatggactaaagacttaaacgttagacctaaaaccataaaa
accctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatg
tctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctcattaaa
ctaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaaaa
tggaagaaaattttcgcaacctactcatctgacaaagagctaatatccagaatctacaat
gaacacaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagcaggcaaaggat
atgaacagacacttctcaaaagaagacatttatgtagccaaaagacacatgaaaaaatgc
tcatcatcactggccatcagagaaatgcaaatcaaaactacaatgagataccatctcata
ccagttagaatggcgatcattaaaaagtcaggaaacaacagttctggggagcacctcata
gacatgagtgatgtagaggagaacaacttcaagggcatagttaatgttcatgaagaaact
gaagagttttttccaaaaatgttgaagataaatcaaggcatctatatgggcagaactcat
agtggtggtggcggaggtggtggcaaaggcggcagtggaggtggtcacagacgtcgagat
tcttactatgatagaggatatcatcgtggatatgacagatatgaagactatgattaccgg
tacagaagatga

>gi568815597f:51959848_52186755|GENSCAN_predicted_peptide_6|260_aa
MRKKQSRKTGNSKKQRVSPPPKERSSSPAMEQTWMENDFDELREEGFRRSNYSKLQEEIQ
TKGKEVENFEKNLDKCITRITNTEKCLKELKAKARELREECRSLRSRCDQLEETVSVMED
EMNEMKQEGKFREKRIKRNEQSLQEKWDYVKRPNLHLNGVPESDGENGTKLANTLQDIIQ
ENFPNLARQANIQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAATEKGRVTHK
GKPIRLTADLSAETLRARRE

>gi568815597f:51959848_52186755|GENSCAN_predicted_CDS_6|783_bp
atgaggaaaaaacagagcagaaaaactggaaactctaaaaagcagcgtgtctctcctcct
ccaaaggaacgcagttcctcaccagcaatggaacaaacctggatggagaatgactttgac
gagctgagagaagaaggcttcagacgatcaaactactccaagctacaggaggaaattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaacttagacaaatgtataactagaata
accaatacagagaagtgcttaaaggagctgaaagccaaggctcgagaactacgtgaagaa
tgcagaagcctcaggagccgatgcgatcaactggaagaaacggtttcagtgatggaagat
gaaatgaatgaaatgaagcaagaagggaagtttagagaaaaaagaataaaaagaaacgaa
caaagcctccaagaaaaatgggactatgtgaaaagaccaaatctacatctgaatggtgta
cctgaaagtgacggggagaatggaaccaagttggcaaacactctgcaggatattatccag
gagaacttccccaatctagcaaggcaggccaacattcagattcaggaaatacagagaacg
ccacaaagatactcctcgagaagagcaactccaagacacataattgtcagattcaccaaa
gttgaaatgaaggaaaaaatgttaagggcagccacagagaaaggtcgggttacccacaaa
gggaagcccatcagactaacagctgatctctcggcagaaactctacgagccagaagagag
tag

>gi568815597f:51959848_52186755|GENSCAN_predicted_peptide_7|145_aa
MTLEELEDREDKFNEEDECAIEMYRQQRLAEWKATKLKNKFEEVLEISGKDYVQEVTKAS
EGLWVVLHLYKQGIPLCALINQHLSGVARKFPDVKFIKAISTTCIPSYPDRNLPMIFVYV
EGDIKAQFIGPLVFGGINLTRDELQ

>gi568815597f:51959848_52186755|GENSCAN_predicted_CDS_7|438_bp
atgactttggaagagctggaggatcgtgaagacaagtttaatgaggaggatgaatgtgct
attgaaatgtacagacagcagagactggctgagtggaaagcaactaaattgaagaataaa
tttgaagaagttttggagatctcagggaaggattatgttcaagaagttaccaaagccagt
gagggtttgtgggtcgtcttgcacctttacaaacaaggaattcccctctgtgccctgata
aatcagcacctcagtggagttgccaggaagtttcctgatgtcaaatttatcaaagccatt
tcaacaacctgcatacccagttatcctgataggaatctgcccatgatatttgtttacgtg
gaaggagatatcaaggctcagtttattggtcctctggtgtttggcggcattaacctgaca
agagatgagttgcagtga