GENSCAN 1.0	Date run:  7-Nov-116	Time: 16:47:34

Sequence gi568815597f:35473926_35694673 : 220748 bp : 44.05% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    191    242   52  1  1   59   67    59 0.137   2.22
 1.02 Intr +  28485  28574   90  1  0  -52   28   253 0.328   5.27
 1.03 Term +  33616  33728  113  2  2   62   48    84 0.616   0.52
 1.04 PlyA +  36415  36420    6                               1.05

 2.00 Prom +  39387  39426   40                              -4.16
 2.01 Init +  41520  41680  161  2  2   85   72    91 0.742   6.50
 2.02 Intr +  69540  69697  158  0  2   42   78   124 0.043   6.45
 2.03 Intr +  83260  83406  147  2  0   70   67   126 0.064   8.91
 2.04 Intr +  83449  83610  162  2  0   64   65   128 0.675   8.05
 2.05 Intr +  83796  83958  163  1  1   49   93    50 0.855   0.63
 2.06 Intr +  83998  84085   88  1  1   74  -44   189 0.965   4.27
 2.07 Intr +  85152  85322  171  2  0  117   66   220 0.863  22.84
 2.08 Intr +  86401  87369  969  0  0   84   94  1369 0.980 128.30
 2.09 Intr +  88467  88708  242  2  2   37  117   350 0.724  29.15
 2.10 Intr +  89277  89501  225  0  0   93   61   314 0.933  26.30
 2.11 Intr +  89842  89984  143  1  2  131  110    61 0.999  12.60
 2.12 Term +  91302  91738  437  1  2  104   55   621 0.999  55.85
 2.13 PlyA +  92830  92835    6                               1.05

 3.00 Prom +  97868  97907   40                              -6.86
 3.01 Init +  99677  99679    3  1  0   98  101     0 0.516   2.30
 3.02 Intr + 100002 100484  483  2  0   98   94   545 0.907  49.32
 3.03 Intr + 101024 101075   52  1  1  120  116    64 0.867  10.88
 3.04 Intr + 102235 102314   80  2  2   87  -29    99 0.797  -2.63
 3.05 Intr + 102836 103329  494  1  2   44   80   401 0.817  26.70
 3.06 Term + 103519 103660  142  1  1   96   49    83 0.934   2.60
 3.07 PlyA + 104504 104509    6                              -0.45

 4.00 Prom + 107168 107207   40                              -5.16
 4.01 Init + 109900 109975   76  0  1   87   86   -34 0.480  -2.45
 4.02 Intr + 114405 114627  223  1  1  120   91   207 0.900  21.39
 4.03 Intr + 116005 116123  119  1  2   37  113   204 0.912  17.91
 4.04 Intr + 116709 116850  142  1  1   73   89   284 0.999  26.41
 4.05 Term + 120469 120751  283  1  1   98   36   254 0.990  16.10
 4.06 PlyA + 121648 121653    6                               1.05

 5.07 PlyA - 122231 122226    6                               1.05
 5.06 Term - 129449 129342  108  2  0  125   38   137 0.996  10.91
 5.05 Intr - 131357 131308   50  0  2   86  105   -25 0.965  -2.60
 5.04 Intr - 135483 135321  163  0  1  114   91   196 0.999  22.05
 5.03 Intr - 157419 157349   71  1  2  107  114    60 0.972   9.40
 5.02 Intr - 167651 167417  235  2  1   48   93   267 0.711  20.46
 5.01 Init - 169589 169545   45  2  0   72  113    -4 0.612   1.19
 5.00 Prom - 170905 170866   40                              -5.46

 6.00 Prom + 176675 176714   40                              -0.96
 6.01 Init + 179495 179548   54  1  0   52  110    -5 0.401  -0.62
 6.02 Intr + 180469 180703  235  0  1   77   18   139 0.138   3.06
 6.03 Intr + 193748 193857  110  0  2   90   30    85 0.194   2.90
 6.04 Term + 199116 199238  123  2  0   72   39    80 0.319  -0.12
 6.05 PlyA + 200121 200126    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:35473926_35694673|GENSCAN_predicted_peptide_1|84_aa
MGNDGPYNGPVRIGYNPVIAAVIIIIIIIIIIIITITIIKDYLSVHMGISQGQCENCGTR
RTGSNVRTVGPEEQFPQQTGSNTD

>gi568815597f:35473926_35694673|GENSCAN_predicted_CDS_1|255_bp
atgggaaacgatggtccttacaacggtcctgtgaggataggatataacccggttattgct
gctgtcatcatcatcatcatcatcatcatcatcatcatcatcaccatcaccatcattaaa
gactacctcagtgtccacatgggtatttctcagggacaatgtgagaactgtgggaccaga
agaacaggtagcaatgtgagaactgtgggaccagaagaacagtttccccagcaaactggc
agcaacacagactga

>gi568815597f:35473926_35694673|GENSCAN_predicted_peptide_2|1021_aa
MPLNDFWVNNEIKAEIKKLFETNKNKDTTYQNLWDTAKAVLKGKFIALNTHIKRYMKSRD
IMPPKKSPENAFPLKIKTNAYSKYTILLKEKDTTGSDWYNRGYSPQTSRPRPPTGAQGHI
AGPRLSAASASSWSMGSGTPNLRSPHPEEEEEEEEASLDSDGGRKHRLLPPPRDRPGNTL
SMLTKPSRPSPGKGNAGRETKGEEGQCWAEPGVKQPRIRQERCGGGGGAAAAWSQEWATR
REQRPEAPGASRWEKTSPLGAAACRGLSEPALIDADTPRGPYRDSIAPYRDTIRDAQSLL
CSQLGKASIMASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVTKAVKAGDI
DAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPELAAHPQVLN
KIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSALCQAYLGH
GYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFELCQLLPLFL
PPTTVPPECYRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAGSSGSKFLA
LLVNLACVEVRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQKVQLVSVM
KEAIGAVIHYLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPFLVRYAKTL
YEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREILIKEGAPS
LLCKYFLQQWELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDACFTSLMNT
LMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAILFLSQSHV
ARATPGSDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELL
QLLGSVSPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAALEQCLSE
P

>gi568815597f:35473926_35694673|GENSCAN_predicted_CDS_2|3066_bp
atgcccctgaatgacttttgggtaaataatgaaattaaggcagaaatcaagaagttattt
gaaactaataagaacaaagatacaacataccagaatctctgggacacagctaaggcagtg
ttaaaagggaaattcatagcactaaatacccacatcaaaagatacatgaagagcagagat
ataatgccacctaaaaagtctcctgaaaatgcttttcccctgaagattaagaccaatgca
tattcaaaatataccattctcttaaaggaaaaagacaccactggctctgactggtacaac
agaggctacagccctcaaaccagccgcccccggccacctaccggggctcagggccacata
gcggggccccggctctcggcggcctccgcctcctcctggtccatgggctcggggaccccc
aaccttcgctcccctcacccggaggaggaggaggaagaggaagaagcctccctggacagc
gacggcggccggaaacaccgcctcctcccacctccccgggaccgacccggaaacacactc
tccatgctaaccaagccctcccgcccctcccccgggaagggcaatgccggccgcgagacc
aagggggaggaggggcagtgctgggcggagcccggagtgaagcagccgcggattcgtcaa
gagcggtgcgggggtgggggtggagctgcagcagcctggagccaggagtgggcaacgcgg
cgtgagcagcggcccgaggctcccggagcatcgcgctgggagaagacttcgccgctcggg
gccgcagcctgccggggcctctccgagccggcgctgatcgatgccgacacaccccgggga
ccctatcgcgactccatcgcgccatatcgcgacaccatcagggatgctcagtccctcttg
tgttcacagttgggcaaggcgagcatcatggcctcggattgcgagccagctctgaaccag
gcagagggccgaaaccccaccctggagcgctacctgggagccctccgtgaggccaagaat
gacagcgagcagtttgcagccctgctgctagtgaccaaggcagtcaaagcaggtgacata
gatgccaaaactcggcggcggatcttcgatgctgtcggcttcaccttccccaatcgtctc
ctgaccaccaaggaggcgccggatggctgccctgaccatgttctgcgggctttgggtgtg
gccctgctggcctgcttctgcagtgaccctgaactggccgcccatccccaagtcctgaac
aagattcccattcttagcaccttcctcacagcccggggggacccggacgatgctgcccgc
cgctccatgattgatgacacctaccagtgcctgacggctgtagcaggcacacccagaggg
cctcggcacctcattgctggtggcaccgtgtctgccctatgccaggcatacctggggcac
ggctatggctttgaccaggccctggcactcctggtggggctgctggctgctgccgagaca
cagtgctggaaggaggcggagcccgacctgctggccgtgttgcggggcctcagtgaggat
ttccagaaagctgaggatgccagcaagtttgagctctgccagctgctgcccctctttttg
cccccgacaaccgtgccccctgaatgctaccgggatctgcaggccgggctggcacgcatc
ctgggaagcaagctgagctcctggcagcgcaaccctgcactgaagctggcagcccgcctg
gcacacgcctgcggctccgactggatcccggcgggcagctccgggagcaagttcctggcc
ctgctggtgaatctggcgtgcgtggaagtgcggctggcactggaggagacgggcacggag
gtgaaagaggatgtggtgaccgcctgctatgccctcatggagttggggatccaggaatgc
actcgctgtgagcagtcactgcttaaggagccacagaaggtgcagctcgtgagcgtcatg
aaggaggccataggggctgttatccactacctgctgcaggtggggtcagagaagcagaag
gagccctttgtgtttgcctcggtgcggatcctgggtgcctggctggccgaggagacctca
tccttgcgtaaggaggtgtgccagctgctgcccttcctcgtccgctatgccaagaccctc
tacgaggaggccgaggaggccaatgacctttcccagcaggtggccaacctggccatctcc
cccaccaccccagggcccacctggccaggagacgctctccggctcctcctgcctggctgg
tgccacctgaccgttgaagatgggccccgggagatcctgatcaaggaaggggccccctcg
cttctgtgcaagtatttcctgcagcagtgggaactcacatcccctggccacgacacctcg
gtgctgcctgacagcgtggagattggcctgcagacctgctgccacatcttcctcaacctc
gtggtcaccgcaccggggctgatcaagcgtgacgcctgcttcacatctctaatgaacacc
ctcatgacgtcgctaccagcactagtgcagcaacagggaaggctgcttctggctgctaat
gtggccaccctggggctcctcatggcccggctccttagcacctctccagctcttcaggga
acaccagcatcccgagggttcttcgcagctgccatcctcttcctatcacagtcccacgtg
gcgcgggccaccccgggctcagaccaggcagtgctagccctgtcccctgagtatgagggc
atctgggccgacctgcaggagctctggttcctgggcatgcaggccttcaccggctgtgtg
cctctgctgccctggctggcccccgctgccctgcgctcccgctggccgcaggagctgctc
cagctgctaggcagtgtcagccccaactctgtcaagcccgagatggtggccgcctatcag
ggtgtcctggtggagctggcgcgggccaaccggctgtgccgggaggccatgaggctgcag
gcgggcgaggagacggccagccactaccgcatggctgccttggagcagtgcctgtcagag
ccctga

>gi568815597f:35473926_35694673|GENSCAN_predicted_peptide_3|417_aa
MERPDGLGAAAGGARLSSLPQAAYGPAPPLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQ
APDAAAAFPHLAGDPYGGLAPLAQPQPPQAAWAAPRAAARAHEEPPGLLAPPARALGLDP
RRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLLDQSVIKKG
EAKVEVVVAGLGLDFQELGLSYQELGILGVRRNPPKQSKEHNESPNIPGGGALAPWSGAG
RGRADSRAQPRGTGPRGLTCTTAGPQRQRDPSASGTPAPAGPQRQRDPSASGTPAPAGPQ
RQRVCGPVERVERWRPERRLRPGRPSLDVKLQPAQQQQRGRGRSRAQLDPEVVTQGKAWA
VDPGQLRRRGRPSASAECGTGACPARALESEKVALWPPEASDPYSASQPGRERRLRR

>gi568815597f:35473926_35694673|GENSCAN_predicted_CDS_3|1254_bp
atggagcgccccgacgggctgggagcagctgccggcggggcccgcctgtcgtctctgccc
caggcggcctacgggccggcgcccccgctctgccacacgccggccgccacagctgccgcc
gaattccagccgccctacttcccgccgccctacccgcagccaccgctgccctacggtcag
gcgcccgacgccgccgcagcctttccccacctggcaggggacccatatggcggcctggcg
cccctggcgcagccgcagcctcctcaggccgcctgggccgcgccccgcgcagccgcccgc
gcccacgaggagcctcccggcctgctggcaccgcccgcccgcgccctgggccttgacccg
cgccgtgactatgccactgccgtgccccggctcctgcacggcctggccgacggcgcgcac
ggcctggcagacgcacctctcggccttccggggctggcggcggcccccggtctggaggac
ctgcaggcaatggacgagccgggaatgagcctcctagaccagtccgtgatcaagaaaggg
gaggccaaggtggaagtggtggtagcagggctggggctggacttccaggagctggggctg
agttaccaggagctggggatcctaggggtacgccgaaatcccccaaagcagtccaaagaa
cacaacgagagtcctaacatcccaggtggcggcgcgctggctccctggagcggggcggga
cgcggccgcgcggactcacgtgcacaaccgcgcgggacggggccacgcggactcacgtgc
acaaccgcgggaccccagcgccagcgggaccccagcgccagcgggaccccagcgccagcg
ggaccccagcgccagcgggaccccagcgccagcgggaccccagcgccagcgggaccccag
cgccagcgggtctgtggcccagtggagcgagtggagcgctggcgacctgagcggagactg
cgccctggacgccccagcctagacgtcaagttacagcccgcgcagcagcagcaaagggga
aggggcaggagccgggcacagttggatccggaggtcgtgacccaggggaaagcgtgggcg
gtcgacccagggcagctgcggcggcgaggcagaccttcggcctccgccgagtgcggtact
ggagcctgccccgccagggccctggaatcagagaaagtcgctctttggccacctgaagcg
tcggatccctacagtgcctcccagcctgggcgggagcggcggctgcgtcgctga

>gi568815597f:35473926_35694673|GENSCAN_predicted_peptide_4|280_aa
MDSIPLAIFKGRSSEKKRDRWGKQQVPIPSKASSLSALSLAKDSLVGGITNPGEVFCSVP
GRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLN
LPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRK
SMLLAAKQICKEFADLMAQDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAAL
TAFQNYLLESLKGLDKMFLSSVGSGHGETKASEKDAKHRK

>gi568815597f:35473926_35694673|GENSCAN_predicted_CDS_4|843_bp
atggattccatccctcttgccattttcaagggaagaagctctgagaaaaaaagggacagg
tgggggaagcagcaagtgcccatcccctccaaagccagcagcctctcagccctctccttg
gccaaagacagcctggtgggcggcatcacaaatcctggtgaggtcttctgctccgtgccc
ggccggctttcactgctcagctcaacgtccaagtacaaggtgacggtgggggaggtgcag
cggcgactctcgcctcccgagtgcctcaacgcctccctcctggggggtgtcctccgcagg
gccaagtccaaaaatgggggccggtgtttgcgggaacggttagagaagattgggctcaac
ctgccagctggccgtcgcaaggccgccaatgtgacgctgctgacttcgctagtggaagga
gaggccgtgcacctggcccgagacttcggttacgtctgtgagacggagttcccagccaag
gcagctgccgagtacctgtgccgacagcacgctgacccgggggagctgcacagccgcaag
agcatgctgctggctgccaagcagatctgcaaggagtttgcagacttgatggctcaggac
cgctcaccgctgggcaacagccgcccagcactcatcctggagcccggagtacagagctgc
ttgacacactttagcctcatcacccatggcttcggtgggcctgccatctgtgctgccctc
actgccttccagaactatttgctggagtcactcaaggggctggacaagatgtttctaagc
agtgtgggcagtgggcatggtgaaaccaaggcttcggagaaggatgccaagcatcggaaa
taa

>gi568815597f:35473926_35694673|GENSCAN_predicted_peptide_5|223_aa
MSHHTRPNNVSTFRHLYVIRERRGSRAAGVAPIFALRCCLTGETWKRASLVLCRTCSPWP
SATMEYLIGIQGPDYVLVASDRVAASNIVQMKDGYELSPTAAANFTRRNLADCLRSRTPY
HVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVE
LLRKCLEELQKRFILNLPTFSVRIIDKNGIHDLDNISFPKQGS

>gi568815597f:35473926_35694673|GENSCAN_predicted_CDS_5|672_bp
atgagccaccacacccggcccaacaatgtctccacttttagacacttgtacgtcatccga
gagcgccgtggaagtcgtgctgcaggcgtcgcgccaatcttcgctctgaggtgctgtctc
accggtgagacctggaagcgggcgagtctcgtgctgtgtcggacctgcagcccctggcct
tccgccaccatggagtacctcatcggtatccaaggccccgactatgttcttgtcgcctcc
gaccgggtggccgccagcaatattgtccagatgaaggacggatatgaattgtctcccacg
gcagcagctaacttcacacgccgaaacctggctgactgtcttcggagtcggaccccatat
catgtgaacctcctcctggctggctatgatgagcatgaagggccagcgctgtattacatg
gactacctggcagccttggccaaggccccttttgcagcccacggctatggtgccttcctg
actctcagtatcctcgaccgatactacacaccgactatctcacgtgagagggcagtggaa
ctccttaggaaatgtctggaggagctccagaaacgcttcatcctgaatctgccaaccttc
agtgttcgaatcattgacaaaaatggcatccatgacctggataacatttccttccccaaa
cagggctcctaa

>gi568815597f:35473926_35694673|GENSCAN_predicted_peptide_6|173_aa
MFKPQSHPIVIQRAKQCQKCVVGLKRKHQGCLMSSAAGSSIPAAFRQMAPSYSLHYPQGS
GQSHLLMTKNTTLVGLTGADADPVELKWSMIRDWLYEPSSLESLESEADLVGNSQPGQRG
GRMAKERNTDNEELGLAYDGLYDDGHGQTPLTTIRCLRISNTEECEACAWEAL

>gi568815597f:35473926_35694673|GENSCAN_predicted_CDS_6|522_bp
atgttcaagccccagagccatccaatagttattcaaagggccaagcaatgccagaagtgt
gtggttggtctaaaacgcaagcatcagggctgcctgatgtcttcagcagcaggctccagt
atcccagcggctttcagacaaatggcaccttcctactccttgcattatccccaggggtca
gggcagtcacatctgctgatgactaaaaacacaacacttgtaggcctcacaggagctgat
gcagacccagtagaactgaagtggtccatgatcagagactggttgtacgaaccttcatct
ttagagagccttgaaagtgaggccgatttggttggaaacagccagccagggcagcgaggt
ggaagaatggccaaggagagaaacacagacaatgaggagctaggtctagcttacgatggc
ttgtatgatgacgggcatggtcagacacccctcaccaccatacgctgtctgaggatctca
aacacagaggagtgtgaggcctgtgcctgggaagccttataa