GENSCAN 1.0	Date run:  8-Nov-116	Time: 15:40:46

Sequence gi568815597f:230542607_230793390 : 250784 bp : 43.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 PlyA -   1457   1452    6                               1.05
 1.08 Term -   7008   6920   89  1  2   78   52    42 0.099  -2.58
 1.07 Intr -   8676   8530  147  1  0   69   96    63 0.194   5.41
 1.06 Intr -  25586  25531   56  1  2  105   57    46 0.171   1.82
 1.05 Intr -  35336  34992  345  1  0   14   37   807 0.203  62.71
 1.04 Intr -  35994  35954   41  0  2   41   80    24 0.295  -6.08
 1.03 Intr -  36782  36676  107  0  2   37  110    74 0.073   4.43
 1.02 Intr -  69819  69590  230  2  2   90   42   123 0.250   5.41
 1.01 Init -  82395  82364   32  0  2  105   73    40 0.214   3.44
 1.00 Prom -  84636  84597   40                              -2.16

 2.00 Prom +  95661  95700   40                              -0.76
 2.01 Init + 100001 100072   72  1  0   91   91   119 0.008  13.57
 2.02 Intr + 116858 117019  162  1  0  118   25   208 0.695  17.67
 2.03 Intr + 118152 118217   66  2  0   62  119    90 0.713   8.60
 2.04 Intr + 120535 120615   81  0  0   62   69    83 0.900   3.63
 2.05 Intr + 121878 121981  104  2  2   97  111   -23 0.919  -0.13
 2.06 Intr + 126070 126178  109  1  1   71  131    27 0.915   5.59
 2.07 Intr + 126750 126929  180  2  0   80   58   153 0.886  11.56
 2.08 Intr + 128910 129034  125  2  2   98   91    68 0.967   7.48
 2.09 Intr + 132392 132518  127  2  1   77   55    40 0.211   0.28
 2.10 Intr + 136307 136446  140  1  2   95   81     5 0.178  -0.24
 2.11 Intr + 140968 141029   62  1  2   91   93    48 0.937   3.98
 2.12 Intr + 142479 142630  152  1  2  105   94    22 0.962   4.38
 2.13 Intr + 144329 144526  198  1  0   33  115   166 0.971  13.35
 2.14 Intr + 147408 147547  140  2  2   81   97    72 0.969   6.66
 2.15 Intr + 148778 148958  181  2  1   65   91   165 0.982  14.37
 2.16 Intr + 152626 152741  116  0  2   78   82    49 0.528   2.55
 2.17 Term + 159022 159091   70  1  1   76   54    62 0.047  -0.99
 2.18 PlyA + 159140 159145    6                               1.05

 3.05 PlyA - 159352 159347    6                               1.05
 3.04 Term - 160723 160535  189  1  0  119   54   138 0.956  10.95
 3.03 Intr - 161731 161587  145  0  1   93   87   175 0.781  18.18
 3.02 Intr - 163594 163327  268  2  1   97   74   333 0.985  29.39
 3.01 Init - 168217 167389  829  1  1   67  116  1011 0.998  94.68
 3.00 Prom - 181628 181589   40                              -2.06

 4.00 Prom + 188503 188542   40                              -4.56
 4.01 Init + 204891 205704  814  2  1   99   33   190 0.235   9.65
 4.02 Intr + 208454 208590  137  0  2   61  101    61 0.611   4.99
 4.03 Intr + 212731 212800   70  0  1   99   92    51 0.654   5.35
 4.04 Intr + 216906 217024  119  1  2   75  110    71 0.822   8.18
 4.05 Intr + 220047 220180  134  2  2   45   89   219 0.975  17.14
 4.06 Intr + 223835 223975  141  2  0   69   45    71 0.474   0.37
 4.07 Intr + 224935 225103  169  1  1  127   95   213 0.999  25.85
 4.08 Intr + 226574 226657   84  1  0   88   96    58 0.988   6.62
 4.09 Intr + 229408 229493   86  0  2  118   82   108 0.993  11.82
 4.10 Intr + 231414 231508   95  0  2   85   50    30 0.522  -1.49
 4.11 Intr + 231948 232083  136  1  1   77   60    76 0.549   3.33
 4.12 Intr + 235988 236053   66  2  0   80   61    55 0.393   0.02
 4.13 Intr + 236367 236527  161  0  2   96   69   173 0.757  15.83
 4.14 Intr + 237573 237730  158  1  2   32   92   109 0.943   5.43
 4.15 Intr + 237894 238102  209  2  2   92  117   211 0.992  22.28
 4.16 Intr + 243375 243411   37  0  1   99  105    31 0.941   4.16
 4.17 Intr + 244916 244996   81  1  0   43   75    77 0.400   1.73
 4.18 Intr + 247526 247583   58  1  1   66   89    36 0.310  -0.04
 4.19 Intr + 249746 249888  143  0  2   96   34   146 0.981  10.07
 4.20 Intr + 250244 250364  121  1  1   77   84   115 0.603  10.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  40404  40500   97  2  1   69   98   106 0.967  10.17
S.002 Init - 100107  99777  331  0  1   73   65   282 0.815  20.26
S.003 Init + 172163 172217   55  1  1   62  115    31 0.871   4.66


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:230542607_230793390|GENSCAN_predicted_peptide_1|348_aa
MGTQGDSHKARSPAIMNDTVTIWTRELMTNQLLQRKQMVIDILNTGKATVPKTEILEKLV
KIYKTTLDVIFVFGFRTYFGGGKIADFDGFEGVNIYRGKAGGRGKRENMVTVQNPQVARE
KEQEGFQDPVYSFFMFKTRPCLEKRKKKEKKKEKGKGKGKKEGKGKGEEKGEEEEEEKKD
EEEEEDEEEEEEEKKEEEGEEEKEEEEEEEEEKKEEEEEKKEEEGEEEEEEEKKKEEGEE
EEEEEKKKEEEGQQELQQLPPPHLFSLWWPAILLKDAHPDCSTIHNSKDVEPTQIPINDR
LDKENVGHIHHGILCSHKKEQGIPTAAMNAPALSISPPGSVHSIRVLF

>gi568815597f:230542607_230793390|GENSCAN_predicted_CDS_1|1047_bp
atggggacccagggagactcgcacaaggcgagatcacctgccatcatgaatgacacagta
actatctggaccagggaactcatgaccaaccaactacttcaaaggaaacaaatggtcata
gatatccttaacactgggaaggcaacagtaccaaagacagaaattctggaaaaattagtc
aaaatatacaagaccacactggatgtcatctttgtatttggattcagaacttattttggt
ggtggcaagatagctgactttgatggttttgagggcgtcaatatttacaggggaaaagca
ggtggaagaggaaagagggagaatatggtcacagtacagaacccacaagttgcaagagaa
aaggagcaggaaggtttccaggaccctgtgtacagctttttcatgttcaaaacaagacct
tgtctggagaagaggaagaagaaggagaagaagaaggagaaggggaaggggaaggggaag
aaggaggggaaggggaagggggaggagaagggggaggaggaggaagaggagaagaaggac
gaggaggaggaagaagatgaggaggaggaagaagaggagaagaaggaggaggagggggag
gaagagaaggaggaggaagaagaggaggaggaggagaagaaggaggaggaggaggagaag
aaggaggaggaaggggaggaagaggaggaggaggagaagaagaaggaggaaggggaggaa
gaggaggaggaggagaagaagaaggaggaggaggggcagcaggagctgcagcagctgcca
ccaccacacctcttcagcctctggtggccagcaatcctcctgaaagatgctcatcctgat
tgcagcactattcacaatagcaaagacgtggaaccaacccaaattcccatcaatgataga
ctggataaagaaaatgtgggacatatacaccatggaatactatgcagccataaaaaggag
cagggcatcccgacagcagctatgaatgcacctgctctgagcatctccccgccaggctct
gtgcactccatcagggtcctcttctga

>gi568815597f:230542607_230793390|GENSCAN_predicted_peptide_2|694_aa
MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAM
VELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQ
EDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQL
QFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKT
RDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMYNKLLEFVPHHCRLLREVTGGAISS
EKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNPGNPDAFHEKYTISMDFVRRLERQCGS
QASVKRLRAHPAYHSFNKKWNLPVYFQIRFREIAGSLEAALTDVLEDAPAESPYCLLASH
RTWSSLRRCWSDEMFLPLLVHRLWRLTLQILARYSVFVNELSLRPISNESPKEIKKPLVT
GSKEPSITQGNTEDQGSGPSETKPVVSISRTQLVYVVADLDKLQEQEVPTTASSYVDSAL
KPLFQLQSGHKDKLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARK
TTPANPVGPSGGMSDDDKIRLQLALDVEYLGEQLFPVTKANLKPSQEGSRGEHRSSLAKP
IQCKATSVATWSSSEKLGILQPFRRVHVCQLYPL

>gi568815597f:230542607_230793390|GENSCAN_predicted_CDS_2|2085_bp
atggagaaaagtaggatgaacctgcccaaggggccggacacgctctgcttcgacaaggac
gagttcatgaaggaagatttcgatgtcgatcattttgtgtctgactgtaggaagcgggtc
cagctggaagaactgagagatgacctggagctctactataaacttcttaaaacagccatg
gtcgaactcatcaacaaggattatgcagattttgtcaatctttcaacaaacttggttggc
atggacaaagccctcaaccagctttctgtgcctttgggacaattacgagaagaggttctg
agccttagatcgtctgtcagtgaaggaattcgggcagttgatgaacgaatgtctaaacaa
gaggacattaggaaaaaaaagatgtgtgtattgaggcttatacaagttattcggtcagtt
gagaaaattgaaaaaatcttaaactctcaaagttctaaagaaacctctgcactagaagca
agcagcccccttttgactggacaaattttggagagaattgccacagaatttaatcagtta
cagtttcatgctgttcaaagcaaaggcatgcctcttttggacaaagtaagaccgcgtata
gctggcattacagccatgttacagcagtcactggaaggtctcctattagaaggccttcag
acgtctgacgtcgatataatacggcactgcttgcggacttacgccacgattgacaagaca
cgggacgcggaggccttagttggccaagtactagtgaaaccatacatagacgaggtgatt
atagagcagtttgttgaatctcatcccaatggccttcaggtcatgtataataaactcctg
gagtttgttcctcaccattgccgccttcttcgagaagtcacaggaggtgccatctccagt
gaaaaaggcaatactgttcctggatatgactttttggtgaattctgtttggccacaaata
gtacaaggattagaagaaaagttaccctcgctttttaatcctgggaatcccgatgcattt
catgagaaatataccataagtatggattttgtcagaagattggaacggcagtgtggatca
caggctagtgtaaagagattaagagcccatcctgcctatcacagcttcaataagaagtgg
aacttgcctgtttattttcaaataagatttagagaaatagcgggatccttagaagcagca
cttacagatgtcctggaagatgccccagctgaaagtccgtattgccttttggcttctcat
agaacttggagcagccttaggaggtgttggtcagatgagatgttcttgccattactggtg
catcgcctgtggagactcactctgcagattttggcacgatactctgtgtttgtcaatgag
ctttcactcaggcccatttctaatgaaagtcccaaggagatcaagaaacctttggtaact
ggtagcaaagaaccttccatcacccaaggaaacactgaagaccaaggaagtggtccttcg
gaaacaaagcctgtggtttccatttcccgcactcagctcgtgtatgtggttgcagacctg
gacaagcttcaggagcaggaggtcccaaccacagcttcctcctatgtggacagtgctctg
aagcccttattccagcttcagagcggacacaaggataagctcaaacaagcaataattcag
cagtggctagaaggcactctcagtgaaagcactcataagtactatgaaaccgtgtcagat
gtattaaactctgtgaagaagatggaagagagcctgaaaaggctgaaacaagccagaaaa
accactcccgccaaccccgtcggtcccagtggtggcatgagcgacgacgacaaaatcagg
ctgcagttggccctagatgttgagtacttgggagagcagctgtttcctgtgaccaaggcc
aacctcaaaccatcccaggaagggagtcgtggggaacacaggtccagcctcgctaagccg
atccagtgcaaagctacctcagtagccacatggagttcttccgagaaacttggcatcttg
cagccgtttcggagagtccatgtgtgccagctctacccgctttga

>gi568815597f:230542607_230793390|GENSCAN_predicted_peptide_3|476_aa
MAPAGVSLRATILCLLAWAGLAAGDRVYIHPFHLVIHNESTCEQLAKANAGKPKDPTFIP
APIQAKTSPVDEKALQDQLVLVAAKLDTEDKLRAAMVGMLANFLGFRIYGMHSELWGVVH
GATVLSPTAVFGTLASLYLGALDHTADRLQAILGVPWKDKNCTSRLDAHKVLSALQAVQG
LLVAQGRADSQAQLLLSTVVGVFTAPGLHLKQPFVQGLALYTPVVLPRSLDFTELDVAAE
KIDRFMQAVTGWKTGCSLMGASVDSTLAFNTYVHFQGKMKGFSLLAEPQEFWVDNSTSVS
VPMLSGMGTFQHWSDIQDNFSVTQVPFTESACLLLIQPHYASDLDKVEGLTFQQNSLNWM
KKLSPRTIHLTMPQLVLQGSYDLQDLLAQAELPAILHTELNLQKLSNDRIRVGEVLNSIF
FELEADEREPTESTQQLNKPEVLEVTLNRPFLFAVYDQSATALHFLGRVANPLSTA

>gi568815597f:230542607_230793390|GENSCAN_predicted_CDS_3|1431_bp
atggctcctgccggtgtgagcctgagggccaccatcctctgcctcctggcctgggctggc
ctggctgcaggtgaccgggtgtacatacaccccttccacctcgtcatccacaatgagagt
acctgtgagcagctggcaaaggccaatgccgggaagcccaaagaccccaccttcatacct
gctccaattcaggccaagacatcccctgtggatgaaaaggccctacaggaccagctggtg
ctagtcgctgcaaaacttgacaccgaagacaagttgagggccgcaatggtcgggatgctg
gccaacttcttgggcttccgtatatatggcatgcacagtgagctatggggcgtggtccat
ggggccaccgtcctctccccaacggctgtctttggcaccctggcctctctctatctggga
gccttggaccacacagctgacaggctacaggcaatcctgggtgttccttggaaggacaag
aactgcacctcccggctggatgcgcacaaggtcctgtctgccctgcaggctgtacagggc
ctgctagtggcccagggcagggctgatagccaggcccagctgctgctgtccacggtggtg
ggcgtgttcacagccccaggcctgcacctgaagcagccgtttgtgcagggcctggctctc
tatacccctgtggtcctcccacgctctctggacttcacagaactggatgttgctgctgag
aagattgacaggttcatgcaggctgtgacaggatggaagactggctgctccctgatggga
gccagtgtggacagcaccctggctttcaacacctacgtccacttccaagggaagatgaag
ggcttctccctgctggccgagccccaggagttctgggtggacaacagcacctcagtgtct
gttcccatgctctctggcatgggcaccttccagcactggagtgacatccaggacaacttc
tcggtgactcaagtgcccttcactgagagcgcctgcctgctgctgatccagcctcactat
gcctctgacctggacaaggtggagggtctcactttccagcaaaactccctcaactggatg
aagaaactatctccccggaccatccacctgaccatgccccaactggtgctgcaaggatct
tatgacctgcaggacctgctcgcccaggctgagctgcccgccattctgcacaccgagctg
aacctgcaaaaattgagcaatgaccgcatcagggtgggggaggtgctgaacagcattttt
tttgagcttgaagcggatgagagagagcccacagagtctacccaacagcttaacaagcct
gaggtcttggaggtgaccctgaaccgcccattcctgtttgctgtgtatgatcaaagcgcc
actgccctgcacttcctgggccgcgtggccaacccgctgagcacagcatga

>gi568815597f:230542607_230793390|GENSCAN_predicted_peptide_4|1007_aa
MPYLYRAPGPQAHPVPKDARITHSSGQSFEQMRQECLQRGTLFEDADFPASNSSLFYSER
PQIPFVWKRPGVSGASRGRSIDEAEVQQPPQEVETGVLGRGRLRSVQLRCIIPVYRGKLC
SLEAENNVQAWDALRWGPGASGCTRSPAPSCLTPTEAEDLESEWVLSAGDRHESKPYPQG
QAPTLCVVTLRSRYAQCSVASGPELRVLSVDGCLAQQGLSNRVTDGIQGKQESSPENHAP
PIPRDQGEQCPTSDSLEVSSQEAPAGHWVPRGNSPPPILSVNPGHLPESAHTPLAHVNNP
CGRPVHSVACDHSLSCTEIVKNPEFILGGATRTDICQGELGDCWLLAAIASLTLNQKALA
RVIPQDQSFGPGYAGIFHFQFWQHSEWLDVVIDDRLPTFRDRLVFLHSADHNEFWSALLE
KAYANPSLTRRKNIRQILILQYACPGLLKTVKVIKNKDSLINCHSHKKPKDMLNGSYEAL
KGGSAIEAMEDFTGGVAETFQTKEAPENFYEILEKALKRGSLLGCFIDTRSAAESEARTP
FGLIKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQVEWNGSWSDRTGTPSSQNPTWLASE
VTYKRCRVQTTSSMGRFLRSGVLLVQLSRSVCVTLLWMMGNSGTVLVPVLTADTSKSHGP
GAPPESCPAQDLVVQVSTQNVPHQMAFKDFKAHFDKVEICNLTPDALEEDAIHKWEVTVH
QGSWVRGSTAGGCRNFLDTFWTNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN
VLTIGYAIYECPDKDEHLNKDFFRYHASRARSKTFINLREVSDRFKLPPGEYILIPSTFE
PHQEADFCLRIFSEKKAITRDMDGNVDIDLPEPPKPTPPDQETEEEQRFRALFEQVAGED
MEVTAEELEYVLNAVLQKIPELRSHEEPQVETLLMSPLTHMAQTSGNGKLEFDEFKVFWD
KLKQWINLFLRFDADKSGTMSTYELRTALKAAGKEKTGVQVADCMPX

>gi568815597f:230542607_230793390|GENSCAN_predicted_CDS_4|3021_bp
atgccttacctctaccgggccccagggcctcaggcacacccggttcccaaggacgcccgg
atcacccactcctcaggccagagctttgagcaaatgaggcaggagtgcctgcagagaggc
accctgtttgaggatgcagacttcccagccagcaattcctccctgttctacagtgagagg
ccgcagatcccctttgtgtggaaacgaccaggggtgagtggggcgagcaggggaaggagc
atagatgaggccgaggttcagcagcccccgcaggaagtggaaacaggggtgctggggagg
ggccggctacgctcagtgcaactgaggtgcatcatcccagtctaccgtggaaagctttgc
agtttggaggcagaaaataatgtacaggcctgggatgctctgcggtggggacccggggca
tctggttgtacccgctccccggctccaagctgtctgactcccaccgaggctgaggacctg
gagtcagagtgggtcttgtcagcaggtgataggcacgaatcaaaaccttatccacaagga
caggcccccaccctgtgtgtggtaacactgagatcacgttatgcacagtgttctgtggct
tctggcccagagctgagggtgctcagtgtggatggatgtttggctcagcaaggtctcagc
aaccgggtgacagatggaatacaagggaagcaggaatcttctcccgagaaccatgcaccc
cccattcccagagatcagggtgaacagtgccccacctctgacagtctggaggtgtcgtcc
caagaggcaccagctggtcactgggtcccaagaggcaattcccccccaccaattctcagt
gtaaatccaggacacctccccgaaagtgcccacacccctctagcccatgtgaacaacccc
tgtggcagacctgtgcacagcgtggcatgtgaccacagcctctcctgcacggaaatcgtg
aaaaacccagaattcattcttggaggggccaccaggactgatatctgccagggagagctg
ggagactgctggctattagccgccatcgcctcccttacgcttaatcaaaaagcactggcc
agagtcatcccccaggaccaaagctttggccctggttatgccgggatattccatttccag
ttctggcagcacagtgagtggctggacgtggtgatcgatgaccgcctgcccaccttcagg
gaccgcttggttttcctccactctgccgaccacaacgagttctggagcgccttgctggaa
aaagcctacgccaaccctagtcttaccaggagaaaaaacattagacaaattctaatcctg
cagtatgcctgcccaggactcctcaaaaccgtcaaggtcatcaaaaacaaggacagtctt
ataaactgtcacagccacaaaaagcctaaggatatgctaaatgggagctatgaagctctg
aagggaggcagcgccatcgaggccatggaagacttcactgggggtgtggcagagaccttc
caaactaaagaggcccccgagaacttctatgagattctagagaaggctttgaagagaggc
tccctgctgggctgcttcattgataccagaagtgctgcagaatctgaggcccggacgccg
tttggtcttattaagggtcatgcctacagtgtaacgggaattgaccaggtaagcttccga
ggccagagaatcgagctcatccgaatccggaacccttggggccaggttgagtggaacggg
tcgtggagcgacaggacgggcacacctagctcacagaaccccacctggcttgccagcgag
gtcacatacaaaaggtgccgggtacagacaacatcaagcatgggcaggtttctccggagt
ggcgttctgttggtccagctgagcagaagcgtctgtgtcacactgctctggatgatgggg
aattctggtaccgtgcttgttcctgtgttaactgcagatacgagcaagtcccatggccct
ggggcacccccagagagctgccctgcccaggacctggtagttcaggtctccactcagaat
gtgccccatcagatggcatttaaggacttcaaggcccactttgataaagtggagatctgc
aacctcactcccgatgccctggaggaagacgcgatccacaaatgggaggtgacggtccat
cagggaagctgggttcgcggctccacggctgggggctgccgcaatttcctggataccttt
tggaccaatccacaaataaaattgtctctgactgagaaagatgaggggcaggaggagtgt
agtttccttgtagccctgatgcagaaagatagaaggaaactcaagagatttggtgccaat
gtgctgacaatcggctatgccatttatgagtgccctgacaaagacgaacacctgaacaaa
gacttcttcagataccacgcttctcgggccagaagcaagacgttcatcaacctgagagaa
gtctccgaccggttcaagctgccccctggggagtacatcctgattcccagcacttttgag
ccccaccaggaagctgatttctgtctgagaatcttttcagagaaaaaagccattacccgg
gatatggatggaaatgtagacattgaccttcctgagcctccaaagccaactccacctgac
caggagacagaggaggagcagcggtttcgggctctgtttgaacaagtcgctggtgaggac
atggaggtgacagcagaggaacttgagtatgttttaaatgctgtgctgcaaaagatccca
gagctgaggtcccacgaggagcctcaggttgaaacactgctcatgtctcccttaacccac
atggcacagaccagcggcaatgggaagctggagtttgatgaattcaaagtgttctgggac
aagctgaagcagtggattaaccttttccttcggtttgatgctgacaagtccggcaccatg
tctacctatgaactacggactgcactgaaagctgcaggtaaagaaaagactggagtacag
gtggctgactgcatgccagnn