GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:52:08

Sequence gi568815597f:207221766_207459607 : 237842 bp : 38.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6536   6737  202  2  1   62  106    39 0.213   1.47
 1.02 Intr +  10676  10837  162  1  0   97   47    98 0.847   5.85
 1.03 Term +  22141  22347  207  0  0   59   41   135 0.623   2.26
 1.04 PlyA +  23339  23344    6                               1.05

 2.06 PlyA -  23501  23496    6                               1.05
 2.05 Term -  34021  33382  640  0  1   43   42   251 0.435   8.69
 2.04 Intr -  34347  34149  199  1  1   52    2   141 0.348  -0.61
 2.03 Intr -  36821  36757   65  1  2   87   97    57 0.204   3.94
 2.02 Intr -  45844  45719  126  0  0   65   62    78 0.239   1.77
 2.01 Init -  51563  51490   74  2  2   75   71    42 0.225   1.79
 2.00 Prom -  52268  52229   40                              -6.35

 3.03 PlyA -  52298  52293    6                               1.05
 3.02 Term -  58474  58290  185  2  2  110   44   114 0.918   5.92
 3.01 Init -  59690  59612   79  2  1   91   87    25 0.395   3.97
 3.00 Prom -  62081  62042   40                              -4.55

 4.03 PlyA -  62481  62476    6                               1.05
 4.02 Term -  70414  70112  303  1  0   22   48   144 0.084  -2.01
 4.01 Init -  72749  72693   57  2  0   92  101    31 0.279   6.16
 4.00 Prom -  76372  76333   40                              -3.95

 5.00 Prom +  84893  84932   40                              -4.05
 5.01 Init +  85127  85296  170  1  2   44   81    88 0.590   2.75
 5.02 Intr +  86702  86806  105  2  0   97   86    88 0.367   7.91
 5.03 Term +  96988  97006   19  1  1   90   38    13 0.023  -6.69
 5.04 PlyA +  97515  97520    6                               1.05

 6.00 Prom +  98941  98980   40                              -3.95
 6.01 Init + 100001 100100  100  1  1   98   84   254 0.999  24.47
 6.02 Intr + 100617 100802  186  1  0  127   97   240 0.998  27.54
 6.03 Intr + 102794 102985  192  0  0   62   87   164 0.988  12.24
 6.04 Intr + 103857 103956  100  1  1   74  110    51 0.968   4.15
 6.05 Intr + 104987 105072   86  2  2  105   94    25 0.963   3.34
 6.06 Intr + 109343 109531  189  0  0   17   74   155 0.686   5.64
 6.07 Intr + 114928 115053  126  2  0  113   87    86 0.993  10.73
 6.08 Intr + 115264 115485  222  2  0   11  113   171 0.370   9.08
 6.09 Intr + 115513 115644  132  2  0   52   82    55 0.434   1.00
 6.10 Intr + 117632 117652   21  0  0  122  119    17 0.663   4.80
 6.11 Intr + 142859 142920   62  0  2  118   67    33 0.059   1.73
 6.12 Intr + 144822 144948  127  2  1   39   69   114 0.350   3.93
 6.13 Intr + 148769 148966  198  0  0   40   79   155 0.335   8.20
 6.14 Intr + 149047 149109   63  2  0   52   84    94 0.631   3.17
 6.15 Intr + 149606 149731  126  0  0   53   70    56 0.407   0.03
 6.16 Term + 185622 185728  107  1  2  -55   33   315 0.893   9.29
 6.17 PlyA + 185911 185916    6                               1.05

 7.06 PlyA - 185965 185960    6                               1.05
 7.05 Term - 193043 192767  277  1  1   36   44   130 0.085  -2.65
 7.04 Intr - 194100 193979  122  0  2   30   86    98 0.185   2.17
 7.03 Intr - 201499 201218  282  1  0   36   44   169 0.080   3.99
 7.02 Intr - 202192 202055  138  1  0    9   94   128 0.493   5.24
 7.01 Init - 203208 203077  132  0  0   71   12   146 0.501   5.49
 7.00 Prom - 229966 229927   40                              -3.25

 8.03 PlyA - 230666 230661    6                               1.05
 8.02 Term - 233086 232533  554  2  2   48   36   256 0.421   9.89
 8.01 Init - 234553 234412  142  1  1   59   89   125 0.524  10.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 124938 124814  125  1  2   26   54   189 0.887   6.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:207221766_207459607|GENSCAN_predicted_peptide_1|190_aa
XSVSETRDRKWKAVWVRICMLNLKMSPSSVTLAIKWLVLKISLWLVLKISLDQSTEHGRH
PEVPSCEWRLGYNGHGVLHESQCLCNDSIYSIDKRQEEALMDADIRCLGKSKDTEIWEDI
IKFAIRFPGLHTDTMKILVNSSLSTLMQCECKQGYALTGAANICRFAGCSSLASQRNGNP
NSPAKIVLSS

>gi568815597f:207221766_207459607|GENSCAN_predicted_CDS_1|573_bp
nnctctgtgtctgaaaccagagacagaaaatggaaagctgtctgggtaaggatctgtatg
ttgaacttgaaaatgtcaccatccagtgtgactctggctataaagtggttggtcctcaaa
atatcactttggttggtcctcaaaatatcacttgatcagagcacagaacatggcaggcac
ccagaggtgcccagttgtgagtggagacttggctataacgggcatggggtcttgcatgaa
tcccaatgtctatgcaatgatagtatttatagtattgacaaacgtcaagaggaggctctg
atggatgcggacatcagatgcttgggtaaatcaaaagatacagaaatatgggaggacatt
atcaagtttgcaattcgcttccccggattacacactgacactatgaaaatattagtgaat
tcctcactcagcactctaatgcagtgtgaatgcaagcaaggatatgctctgactggagca
gctaacatctgcaggtttgcaggttgttcatctctagcttctcaacgcaacgggaatcca
aactccccagccaaaatagtgctgagcagctaa

>gi568815597f:207221766_207459607|GENSCAN_predicted_peptide_2|367_aa
MENTLEVPQKSKNRTTIPSSNPTPGKCSEDLPERSITYLQEAEVFGSVHWFGVVSRMKTI
LYKMGVLNWQTSTSIQTIHENMVLQNELNLWNFEFERDDLGYLAEEISKEQGIQEEAEHK
SLENLQPDNAIGKKNKKQNDIFWGEIQASCRHLLNFGTWGTASKLLQLQLWLKGANVQLG
PLLQRVQAPSLGNFHVVVEPVGAQKSRIEVWEPSPRFQRLYGNHLDVQAEVCYRAEHSWK
TSTRALWKGNVWLEPLHRVPTGALHSRAVRRGPLFSRPQNSRSTDRLCYVPGKATGTQHQ
PIKATRRGAVPCKATGVELPKAMGAHLLHQHDLNVRYRVKRGHFGTLRFNDFPIGFQTCV
GPITPWF

>gi568815597f:207221766_207459607|GENSCAN_predicted_CDS_2|1104_bp
atggagaacactttagaggttcctcaaaaatctaaaaatagaaccaccataccatccagc
aatcctactcctggaaaatgctctgaagatcttccagaaagatctatcacatatttacaa
gaagctgaagtttttggcagtgttcattggtttggtgtggtgtcaaggatgaaaacaata
ctttataaaatgggtgtgttaaattggcaaacatccacaagcatccagaccatccatgaa
aacatggttttacaaaatgaactaaatctgtggaactttgaatttgagagagatgattta
gggtatctggcagaagaaatttctaaggagcaaggcattcaagaggaagcagagcataaa
agtttggaaaatttgcagcctgacaatgcaataggaaaaaaaaacaaaaaacaaaacgac
attttctggggagaaattcaagccagctgcagacatttgcttaactttgggacatggggc
actgcgtccaaacttcttcagctccagctgtggctgaaaggagccaatgtacagcttggg
ccattgcttcagagggtgcaagccccaagccttggcaacttccacgtggttgttgagcct
gtaggtgcacagaagtcaagaattgaggtttgggaaccttcacctagatttcagaggttg
tatggaaaccacctagatgtccaggcagaagtttgctacagggcagagcactcatggaaa
acctctactagggcactgtggaagggaaatgtgtggttggagcccctacacagagtcccc
actggggcactgcatagtagagctgtgagaagagggccattgttctccagaccccagaat
agtagatccactgacagattgtgctatgtgcctggaaaagccacaggcactcaacaccag
cccatcaaagcaacaaggaggggagctgtaccctgcaaagccacaggagtggagctgccc
aaggccatgggagcccacctcttgcatcagcatgacctgaatgtgagatatagagttaaa
agaggtcattttggaactttaaggtttaatgacttccctattggatttcagacttgtgtg
gggcctataaccccttggttttag

>gi568815597f:207221766_207459607|GENSCAN_predicted_peptide_3|87_aa
MEVPSEEVALKLRCEGWVGINQVREESSSHMVCGGGRAQLLWDFALKLRAALLQQKATQG
EIQLVLMGEAFRQALARGDSSIPVARP

>gi568815597f:207221766_207459607|GENSCAN_predicted_CDS_3|264_bp
atggaagtgccctctgaggaagtggcattgaagctaaggtgtgagggatgggtaggaatt
aaccaggtgagagaagaaagcagcagccacatggtgtgtggaggagggagagcacagtta
ctgtgggattttgcattaaaactcagagctgccctgttacagcagaaggcaacacagggt
gaaattcagctggtgctcatgggggaagcatttagacaagccctagccagaggggactct
tccatcccagtggccagaccttga

>gi568815597f:207221766_207459607|GENSCAN_predicted_peptide_4|119_aa
MGKYISQGYKVSGTLVGGNLCLCGFAGYNLPPGCFHGLVLNVCSFSRLSIQAVGGSTILG
SSRLWPSSHSSIGGAPVGTLCGGSDPTFPFDTALAEVLHESPTPAANFCLDIQALPYIL

>gi568815597f:207221766_207459607|GENSCAN_predicted_CDS_4|360_bp
atggggaagtatattagtcaagggtacaaagtttcaggtactctggttggtggaaatctc
tgcctctgtggctttgcagggtacaacctccctcctggctgctttcatgggctggtattg
aatgtctgcagcttttccaggctctcaatacaagctgtcggtggatctaccattctgggg
tctagcagactgtggccctcttctcacagctccataggtggtgctccagtaggaactctg
tgtgggggctctgaccccacatttcccttcgacactgccctagcagaggttctccatgag
agccccacccctgcagcaaacttctgcctggacatccaggcacttccatacatcctctga

>gi568815597f:207221766_207459607|GENSCAN_predicted_peptide_5|97_aa
MVLLLIEVLFDKEGFCHFSYPEKRQGALNGKIKIRVVLNSRKTDSERRRVGKANIEWKLL
ENTHLRNAEKYKKRKTRVQEARHPTIITKEARMLKFG

>gi568815597f:207221766_207459607|GENSCAN_predicted_CDS_5|294_bp
atggttttgcttctaattgaagtgctgtttgacaaagaaggtttttgccatttctcctat
ccagagaagaggcaaggggcattaaatggaaaaatcaaaatcagagtagttctcaactct
aggaaaactgacagtgaaagaagaagggtaggaaaggcaaacattgaatggaagctattg
gagaatacacaccttcgaaatgcggagaaatataagaaaaggaagacaagagttcaagaa
gccaggcatccaacaataataactaaagaggcaagaatgttgaaatttggctga

>gi568815597f:207221766_207459607|GENSCAN_predicted_peptide_6|678_aa
MTVARPSVPAALPLLGELPRLLLLVLLCLPAVWGDCGLPPDVPNAQPALEGRTSFPEDTV
ITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNRSCEVPTRLNSASLKQPYITQNYFP
VGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGI
LFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGER
DHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRGKSLTSKVPPTVQKPT
TVNVPTTEVSPTSQKTTTKTTTPNAQGTLPTLQKPTRANDSATKSPAAAQTSFISKTLST
KTPSAAQNPMMTNASATQATLTAQKFTTAKVAFTQSPSAALTNGLKSTQRFPSAHITATR
STPVSRTTKHFHETTPNKGSGTTSGTTRLLSGTTPFKGYQLRSHYVYGPFLKGLRPKDQG
CWCADANPGVQRIENQELWCLRAVEDGCSSSRREIINFMGIKICGSVSGIAGFLVSLTSR
MKPQTLTVSVTVLKDDVSGVSSYWWVCGLADFRIEAADLHRMKLQTFVVSVTAHKGGADP
KELPASRTLRRGHSSALGQSMGPGVAEQGAAPIWEAQATQEPTEEEEEEEEEEEEEEEEE
EEEEEEEKEKKKKQNPKS

>gi568815597f:207221766_207459607|GENSCAN_predicted_CDS_6|2037_bp
atgaccgtcgcgcggccgagcgtgcccgcggcgctgcccctcctcggggagctgccccgg
ctgctgctgctggtgctgttgtgcctgccggccgtgtggggtgactgtggccttccccca
gatgtacctaatgcccagccagctttggaaggccgtacaagttttcccgaggatactgta
ataacgtacaaatgtgaagaaagctttgtgaaaattcctggcgagaaggactcagtgatc
tgccttaagggcagtcaatggtcagatattgaagagttctgcaatcgtagctgcgaggtg
ccaacaaggctaaattctgcatccctcaaacagccttatatcactcagaattattttcca
gtcggtactgttgtggaatatgagtgccgtccaggttacagaagagaaccttctctatca
ccaaaactaacttgccttcagaatttaaaatggtccacagcagtcgaattttgtaaaaag
aaatcatgccctaatccgggagaaatacgaaatggtcagattgatgtaccaggtggcata
ttatttggtgcaaccatctccttctcatgtaacacagggtacaaattatttggctcgact
tctagtttttgtcttatttcaggcagctctgtccagtggagtgacccgttgccagagtgc
agagaaatttattgtccagcaccaccacaaattgacaatggaataattcaaggggaacgt
gaccattatggatatagacagtctgtaacgtatgcatgtaataaaggattcaccatgatt
ggagagcactctatttattgtactgtgaataatgatgaaggagagtggagtggcccacca
cctgaatgcagaggaaaatctctaacttccaaggtcccaccaacagttcagaaacctacc
acagtaaatgttccaactacagaagtctcaccaacttctcagaaaaccaccacaaaaacc
accacaccaaatgctcaaggaaccctaccaactcttcagaaacccaccagagcaaatgat
tcagccaccaaatccccagcagcagctcagacatctttcatatcaaaaaccctatctaca
aagaccccttctgcagctcagaatcccatgatgacaaatgcttctgctacacaggccaca
ctaacagcccaaaaattcaccacagcaaaagttgcatttacgcagagtccttcagcagca
ctgactaatggtctcaagagtacacaaagattcccttctgctcatattacagcaacacgg
agtacacctgtttccaggacaaccaagcattttcatgaaacaaccccaaataaaggaagt
ggaaccacttcaggtactacccgtcttctatctggaactacacctttcaaaggctatcaa
ctcagatcacattatgtttatggccctttcctgaagggcttaaggcccaaggaccagggc
tgctggtgtgcagatgcaaatcctggagttcaaaggattgagaaccaggagctctggtgt
ctgagggcagtagaagatggatgttccagctcaagaagggaaatcatcaactttatggga
ataaaaatctgcggtagtgtgtctggaattgctgggttcttggtctcgctgacttcaaga
atgaagccgcagaccctcacggtgagtgttacagttcttaaagatgatgtgtctggagtt
tcttcttactggtgggtttgtggtctcgctgacttcaggattgaagctgcagaccttcac
agaatgaagctgcagaccttcgtggtgagtgttacagctcataagggtggtgcggaccca
aaggagctgcccgccagtcgcacgctgcggcgtgggcactcctcagcccttgggcagtcg
atgggaccaggcgtggcagagcagggggcagcacccatctgggaggctcaggccacgcag
gagcccaccgaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaaaaagaaaaaaagaagaagcaaaacccaaagagctaa

>gi568815597f:207221766_207459607|GENSCAN_predicted_peptide_7|316_aa
MRKAVDRSSPSVEKALKQLEAHSTKKERTFDGRVRWAFLTALRENNAGEIPKTVSKRQSC
TDLVQILWEMRQAVFDLQTQGPNNERFTSQWVLALVDTGAHCCLLYGNPDKFPGKAAFTH
GYGGQSVKVKPAFLHLGIGCLAPHLYTVYVSPIPEYILGVNILHGLDLYTMAGEFRLPVH
VAKLAGVWWHDHSVAGQATDKTSQTRPNKAKSFLNPLSESSVFETSCMTSEGNGSMLQLE
SRTDRSWVPLPYENVSCLTCGVEATETCQLGKCQTAENNMSVITFVDPRAQAPTLCISPL
DFDTQPSVGCAGQKKE

>gi568815597f:207221766_207459607|GENSCAN_predicted_CDS_7|951_bp
atgaggaaggcagtggataggtcttccccgagtgtggagaaagcactaaagcagctggaa
gcacacagcaccaagaaggaacgcaccttcgatggcagagtcagatgggcgtttctgact
gcactgagggaaaataatgccggagagataccaaaaactgtgagtaaacggcaatcgtgt
actgatttggtgcagatactctgggagatgcggcaggctgtgtttgatctgcaaacccag
gggccaaataatgaacgctttacctctcagtgggtcctagcactggtagatactggtgca
cactgctgtcttctttatgggaacccggataagtttccgggcaaagctgctttcactcac
ggttatggtggccagtcggtgaaggtgaaacctgcgttcctgcatcttggcattggctgc
ttggccccccacctgtacactgtgtatgtctctcccatacctgaatatattctgggggtg
aacattttgcatggtctggacttatacaccatggccggagaattcagactcccagttcat
gtagcaaagctggctggagtgtggtggcatgatcatagtgtagcaggacaagccacggac
aaaacctctcagacacggccaaataaagccaaatccttccttaacccactgtctgagagc
tcggtttttgagacgtcttgcatgacctcagagggaaatggcagcatgctacagctggag
agtagaactgacaggagctgggtgcctctgccttatgagaatgtctcatgtctcacgtgt
ggtgtagaagccacagaaacctgccaactcggaaagtgtcagacagcagaaaataacatg
tcagtgataacttttgtggacccaagggctcaagccccaacactttgtataagtcccttg
gactttgacacacagccttcggttgggtgtgcagggcagaagaaggaatga

>gi568815597f:207221766_207459607|GENSCAN_predicted_peptide_8|231_aa
MMCGEHAVAVKVSSGEWAKHEPWETGGEDHEQRIQDRQLEKSGGVSFVGRFPVASGSADR
RPESDEHLQNPGGGEPGRRPRAPARRQPHRADQTAPLCGAASNSGGPSSRRGQWGQSGPG
GLLQWSLKASGRRTRVEHCPHRLAFGPLLCIAAQKLSLPGTRPHLRAPPPSSPRTPGATR
AKKTPSRPAAPMPRPKPPRRDAFRDPRASGSSGRARLEQQAAVSQERRALK

>gi568815597f:207221766_207459607|GENSCAN_predicted_CDS_8|696_bp
atgatgtgtggagagcatgcagtagcagtaaaagttagcagtggagagtgggcaaagcat
gagccatgggagacaggtggggaagaccatgagcagcgcatacaagacaggcagctggag
aaatcagggggtgtgagcttcgtgggtaggtttcccgtggcgagcggtagcgctgaccgc
cggccagagagcgatgagcacctgcagaatcctgggggcggggagcccggcaggagaccg
cgagcacccgcacgccgccagccacaccgggccgaccagacagcgcccctctgtggcgca
gcctccaattctggaggtcccagctcccggaggggccagtggggacaatcaggaccaggc
ggtttattgcagtggtccctcaaagctagcgggaggcggacacgcgtcgagcactgcccc
caccgtctcgcttttggccccctgctttgcatcgcggcacagaaactttccctgcccggg
acgcgtccccacctccgtgctccccctcccagctcaccgaggacccccggtgcgacgaga
gccaagaaaaccccgagcaggcccgcggcgcccatgccacggccgaagcccccgcggcgg
gatgcgttccgagacccgcgagcgtccggcagctctgggagggcaaggctggagcagcaa
gcagctgtgagccaggagaggcgggcccttaaatag