GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:21:41

Sequence gi568815597f:168476638_168681217 : 204580 bp : 39.28% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2746   2785   40                              -3.05
 1.01 Init +   4310   4371   62  1  2   81  103    54 0.178   6.99
 1.02 Intr +  10429  10508   80  1  2   73   99    50 0.035   2.88
 1.03 Intr +  19636  19679   44  2  2   61  115    10 0.006  -1.96
 1.04 Intr +  25612  25803  192  0  0   50   72    99 0.017   3.27
 1.05 Intr +  31592  31764  173  1  2   61   39    91 0.020  -0.68
 1.06 Intr +  35584  35722  139  1  1   73   84    41 0.023   1.75
 1.07 Intr +  35882  35966   85  1  1   72   96    32 0.017   0.87
 1.08 Intr +  41245  41439  195  2  0   68  110    76 0.154   6.26
 1.09 Term +  55460  55605  146  0  2   64   50    91 0.113  -0.01
 1.10 PlyA +  56461  56466    6                               1.05

 2.02 PlyA -  57180  57175    6                               1.05
 2.01 Sngl -  62540  61536 1005  2  0   43   42   356 0.881  23.21
 2.00 Prom -  63878  63839   40                             -10.35

 3.06 PlyA -  64150  64145    6                               1.05
 3.05 Term -  64483  64315  169  0  1  105   39   135 0.990   6.67
 3.04 Intr -  65470  65356  115  2  1  102   82    90 0.960   8.39
 3.03 Intr -  66538  66501   38  0  2   88   60    23 0.350  -3.51
 3.02 Intr -  67414  67267  148  2  1  108  115    65 0.434   9.57
 3.01 Init -  67882  67690  193  1  1   53   40   119 0.432   2.78
 3.00 Prom -  69278  69239   40                              -5.15

 4.00 Prom +  69932  69971   40                              -7.15
 4.01 Sngl +  70299  71045  747  2  0   44   49   271 0.921  14.73
 4.02 PlyA +  71142  71147    6                               1.05

 5.00 Prom +  92147  92186   40                              -4.15
 5.01 Init +  99440  99580  141  1  0   53   59   117 0.387   5.48
 5.02 Intr + 100168 100297  130  0  1   99   99    18 0.431   3.35
 5.03 Intr + 103426 103540  115  2  1  107   82   128 0.994  12.69
 5.04 Term + 104415 104583  169  0  1  106   39   142 0.983   7.47
 5.05 PlyA + 104683 104688    6                               1.05

 6.00 Prom + 110652 110691   40                              -5.15
 6.01 Init + 111686 111692    7  1  1   90   96     0 0.787   2.09
 6.02 Intr + 112193 112421  229  0  1   60   83   198 0.654  12.51
 6.03 Intr + 117052 117082   31  1  1   65   93    -4 0.032  -4.99
 6.04 Intr + 122942 123013   72  1  0   85  115    32 0.077   4.28
 6.05 Term + 127108 127221  114  0  0   70   41    90 0.262   0.09
 6.06 PlyA + 127841 127846    6                               1.05

 7.10 PlyA - 128335 128330    6                               1.05
 7.09 Term - 132642 132503  140  1  2   48   43   151 0.566   3.74
 7.08 Intr - 132811 132751   61  1  1   69   71    74 0.715   1.19
 7.07 Intr - 134098 134019   80  2  2  124   46    50 0.920   2.75
 7.06 Intr - 135618 135430  189  1  0   97   93    63 0.964   6.34
 7.05 Intr - 140019 139972   48  1  0   95   57    51 0.229   0.43
 7.04 Intr - 141451 141404   48  2  0   63   71    65 0.239   0.03
 7.03 Intr - 161327 161204  124  2  1   95   14    88 0.609   1.34
 7.02 Intr - 164635 164512  124  0  1   42  106    96 0.477   6.47
 7.01 Init - 164950 164865   86  1  2   44   49    89 0.812   0.94
 7.00 Prom - 167474 167435   40                              -3.35

 8.08 PlyA - 168209 168204    6                               1.05
 8.07 Term - 168315 168293   23  1  2   96   41    25 0.053  -3.90
 8.06 Intr - 173591 173455  137  1  2   84   61   123 0.384   8.49
 8.05 Intr - 178738 178554  185  1  2   33   96    64 0.378  -0.64
 8.04 Intr - 180498 180379  120  0  0   33   67   133 0.315   5.47
 8.03 Intr - 184960 183888 1073  2  2   64   -2   428 0.024  20.41
 8.02 Intr - 190875 190786   90  1  0  137   82    16 0.040   4.95
 8.01 Init - 204159 203799  361  0  1   48   40   132 0.392   1.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  10433  10508   76  1  1   83   99    38 0.906   5.70
S.002 Term - 203663 203308  356  0  2   35   48   198 0.927   4.17


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:168476638_168681217|GENSCAN_predicted_peptide_1|371_aa
MGSSLWGSSKAAKLLFFMYSMDMDEAGNHHSQQTNTGTENQTPHILTQKFSNIEISLHLW
EKMTDTKSGVPQATCYDELAMNLEISIIFSGLIFARMTCRTHGSVIITVIIIKDTIEDLL
SEETNRAPIEDSNSTVYIGFGDHGAKGSEGMQSSCNAGWENTSHEDIIVIVCSLNLKRYK
RVFRNSINLKDFYFMREYLNIIPSKANSLGCGFIGANGKPKVSFEHTEFEMRKGRHREVR
TFAESYKASKWWIQDVNSEYSTTLSKNSWPIKWATARKSLKLKLHEFLVHPLWLGSHLGL
ELWAESDVGWARLSFSEWNGPVTGFREFWHAALLSRANEAWITIPFTVALSDMDGIIVWQ
LDEVYILEVNA

>gi568815597f:168476638_168681217|GENSCAN_predicted_CDS_1|1116_bp
atggggagcagcctgtggggcagcagcaaagctgccaaacttctgtttttcatgtactcc
atggacatggatgaagctggaaaccatcattctcagcaaactaacacaggaacagaaaac
caaacaccacatattctcactcaaaagttttccaacattgaaattagcctgcatctctgg
gaaaagatgacagacacaaagtcaggggttccccaggccacctgctatgatgaactggct
atgaatttggagatttccatcatcttctctggtctgatatttgctagaatgacttgcaga
actcatggaagtgttataattacagttataattataaaggataccattgaggacctgcta
agtgaagagactaacagggcacccatagaagactcaaacagcactgtgtacattggcttt
ggggatcatggggctaaagggtctgaggggatgcagtcttcttgtaatgctggatgggaa
aacacttcccatgaagatatcatagttattgtttgctccttaaatcttaagagatacaaa
agagttttcaggaactctattaacctaaaggatttttatttcatgagagaatacttaaac
ataattccaagtaaagccaattcactaggttgtggatttattggggctaacggcaaaccc
aaggtgagttttgagcacactgagtttgagatgaggaaggggaggcacagagaggtgagg
acatttgcggagagttacaaagccagcaaatggtggatccaagatgtgaactcagaatat
tctacaactctcagcaaaaactcttggcccattaaatgggccactgcaagaaaaagcctg
aagcttaagcttcatgagtttttggtacatcctctttggctgggctcccatctgggttta
gaattgtgggcagagtcggatgttggatgggccagactctctttcagtgagtggaatggt
ccagtcacaggtttcagagaattctggcatgctgcccttctttccagagctaatgaggca
tggataaccattccttttacagttgctctgtctgacatggatggcatcattgtctggcaa
cttgatgaagtatatattttggaggtgaatgcatga

>gi568815597f:168476638_168681217|GENSCAN_predicted_peptide_2|334_aa
MNIDAKILNKILAKQIQQHIKKLIHHDQVGFIPGMQGWFNICKSIEVVHHIKRTKEKNHM
IISIGKAFDKIQQPFMLKTLNKLGIDVTYLKIMRAIYDKPTANIILNGQKLEAFPLKTGT
KQGCPLSPLLFNIVLEVLARAIRLEKEIKGIQLGKEEVKLSLFADDMLVYLENPIVSAQN
LLKLISNFSKVSGYKINGQKSQAFLYTNNRLTENRIMSELPFTIASKRIKYLGIQLTRDV
KDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIMKMDILPKEIYRFNAIPIQLPMTLF
TKLEKTTLKFIWNQKTARIAKTILSQKNKAKCSN

>gi568815597f:168476638_168681217|GENSCAN_predicted_CDS_2|1005_bp
atgaacatcgatgcaaaaatcctcaataaaatactggcaaaacaaatccagcagcacatc
aaaaagcttatccaccacgatcaggtgggcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaatagaagtagtccatcatataaagagaaccaaagaaaaaaaccacatg
attatctcaataggtaaggcctttgacaaaattcaacagcccttcatgctaaaaactctc
aataaactaggtattgatgtgacatatctcaaaataatgagagctatttatgacaaaccc
acagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggcaca
aaacagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagg
gcaatcaggctggagaaagaaataaagggcattcaattaggaaaagaggaagtcaaattg
tccctgtttgcagatgacatgcttgtatatctagaaaaccccattgtctcagcccaaaat
ctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgggcaaaaa
tcacaagcattcctctacaccaataacagactaacagagaaccgaatcatgagtgaactc
ccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtg
aaggacctcttcaaggagaactacaaaccgctgctcaatgaaataaaagaggacacaaac
aaatggaagaacattccatgctcatggataggaagaatcaatatcatgaaaatggacata
ctgcccaaggaaatttatagattcaatgccatccccatccagctaccaatgactctcttc
acaaaattggaaaaaactactttaaagttcatatggaaccaaaaaacagcccgcattgcc
aagacaatcctaagccaaaagaacaaagctaaatgctccaattaa

>gi568815597f:168476638_168681217|GENSCAN_predicted_peptide_3|220_aa
MRTKKAKDREAQCGSSLSSPPERVKGWHQGLMIHGCGSLMSHWMSHEVGWNTVTTPPHFL
YSFRGSALTIGGIKEILKEPDPHSPCTAQRDLSHETSHPGPPWHLLSHCIHCGSKVVMML
TPAQRTGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEGSLRAVIFITKRGLKVCADPQA
TWVRDVVRSMDRKSNTRNNMIQTKPTGTQQSTNTAVTLTG

>gi568815597f:168476638_168681217|GENSCAN_predicted_CDS_3|663_bp
atgagaaccaagaaagcaaaggatcgagaagctcagtgtggcagcagcctctcttcccct
cctgagagagtcaaagggtggcatcagggactcatgatccatggttgtggaagcctcatg
tcacactggatgtcacatgaggtgggatggaacacagtgaccaccccacctcatttcctt
tacagcttccgtggaagtgcactgaccattggaggcataaaagagatcctcaaagagccc
gatcctcactctccctgcacagctcagcgggacctcagccatgagacttctcatcctggc
cctccttggcatctgctctctcactgcatacattgtggaagcaaggtggtgatgatgtta
acccctgctcaaagaacaggtgtagggagtgaagtctcacataggaggacctgtgtgagc
ctcactacccagcgactgccagttagcagaatcaagacctacaccatcacggaaggctcc
ttgagagcagtaatttttattaccaaacgtggcctaaaagtctgtgctgatccacaagcc
acgtgggtgagagacgtggtcaggagcatggacaggaaatccaacaccagaaataacatg
atccagaccaagccaacaggaacccagcaatcgaccaatacagctgtgaccctgactggc
tag

>gi568815597f:168476638_168681217|GENSCAN_predicted_peptide_4|248_aa
MVKGSIQQEELTILNIYAPNPGAHRFKKQVLRDLQGDLDSHTIIMGDFNTPLSTLDRSTR
QKVNKDIQELNSALHQVDLIDIYRTLHPKSAEYTFLSAPHRTYSKIDHIIGSKALLSKCK
RIEIITNCLSDHSAIKLELRIKKLTQNRSTTWKLNNLLLNDYWVHNEMKAEIKMFFETNE
NKETTYQNLWDTFKKVCIGKLITLNAHKRKQERSKIDPLTSQLKEIEKQEQTHSNVSRRQ
EITRSGQN

>gi568815597f:168476638_168681217|GENSCAN_predicted_CDS_4|747_bp
atggtaaagggatcaattcaacaagaagagctaactatcctaaatatatatgcccccaat
ccaggagcacacagattcaaaaagcaagtcctcagagacctacaaggagatttagactcc
cacacaataataatgggagactttaacaccccactgtcaacattagacagatcaacgaga
cagaaagttaataaggatatccaggaattgaactcagctctacaccaagtggacctaata
gatatttacagaaccctccaccctaaatcagcagaatatacattcctctcagcaccacat
cgcacttattccaaaattgaccacataattggaagtaaagcactcctcagcaaatgtaaa
agaatagaaattataacaaactgtctctcagaccacagtgcaatcaaactagaactcagg
attaagaaactcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaat
gactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgag
aacaaagaaacaacataccagaatctctgggacacatttaaaaaagtgtgtatagggaaa
ttgataacactaaatgcccacaagagaaagcaggaaagatctaaaattgaccccctaaca
tcacaattaaaagaaatagagaagcaagagcaaacacattcaaatgttagcagaaggcaa
gaaataacaagatcagggcagaactga

>gi568815597f:168476638_168681217|GENSCAN_predicted_peptide_5|184_aa
MRTKKAKDREAQCGSSLSSPPERVKGWHQGLMIHGCGSLMSHWMSHEGSLKLPMCKKGMM
ILTVEGFVNFQNRENLISIWAPTFPNWVISGVGSEVSDKRTCVSLTTQRLPVSRIKTYTI
TEGSLRAVIFITKRGLKVCADPQATWVRDVVRSMDRKSNTRNNMIQTKPTGTQQSTNTAV
TLTG

>gi568815597f:168476638_168681217|GENSCAN_predicted_CDS_5|555_bp
atgagaaccaagaaagcaaaggatcgagaagctcagtgtggcagcagcctctcttcccct
cctgagagagtcaaagggtggcatcagggactcatgatccatggttgtggaagcctcatg
tcacactggatgtcacatgaggggagccttaaacttcccatgtgcaagaaaggaatgatg
attttgactgtagagggcttcgtaaacttccaaaacagggagaatttgattagtatctgg
gctcctacttttcctaattgggtaatttcaggtgtagggagtgaagtctcagataagagg
acctgtgtgagcctcactacccagcgactgccggttagcagaatcaagacctacaccatc
acggaaggctccttgagagcagtaatttttattaccaaacgtggcctaaaagtctgtgct
gatccacaagccacatgggtgagagacgtggtcaggagcatggacaggaaatccaacacc
agaaataacatgatccagaccaagccaacaggaacccagcaatcgaccaatacagctgtg
actctgactggctag

>gi568815597f:168476638_168681217|GENSCAN_predicted_peptide_6|150_aa
MEVGNANHDKSWTSRQIAGAAQLRLSIFGASGDPCYRQAGLLPVGCRPKTHSHEQRNPEQ
TVFLILNDTTRAAYTLGRRYLAVELLGLTIGNRNVKSMTGKIVHLVQEELRQMARSPYLP
KAADPQVAKAHHPSVLNPTKILHQVKNALH

>gi568815597f:168476638_168681217|GENSCAN_predicted_CDS_6|453_bp
atggaggtaggaaatgcaaatcacgacaaatcatggacatccagacaaattgctggagct
gctcagctgagactgagcatcttcggtgcctcaggggatccatgttacagacaagcaggc
cttttgccagtgggctgcaggcccaagacacatagtcatgagcagagaaacccagagcaa
acggtcttccttatccttaatgacaccaccagggcagcttatactttgggaagaagatac
ctagcagtggaattgctgggtcttactattgggaacagaaatgtaaaaagcatgacagga
aaaattgttcatctggttcaggaggagctgaggcaaatggctaggtctccttatcttccc
aaagctgcagaccctcaggttgccaaggcacatcatccgtctgtgctgaacccaaccaag
attcttcaccaagtgaagaatgctctgcactaa

>gi568815597f:168476638_168681217|GENSCAN_predicted_peptide_7|299_aa
MRANTGREETRKVPEKVSVWPAGHKQYSCGCKNSLTSVSQNLFLDISLFGKSHEDEDLSA
GISSVWTRHKETWSYYVNKDMYILTSSYGVKLASIQKYTLSLRMGVYDPQTVLGELPSAF
RVKLKLTRISGQWYTGKGVTSSLGPGDVWHDFSLKPATPLEEDLSGHGVSLRSQSAKSSL
WHQPSLQWPLQISHILGMVVLNLGIQDAKTDGKWGYLPHITKHVSGSAKIYTQELSNSHA
LKRQIQHNKYPVTAQRVTQPAATIASRVKPAKIIKSTLPREMKDILVCAKSSQLPHFID

>gi568815597f:168476638_168681217|GENSCAN_predicted_CDS_7|900_bp
atgagagcgaacacaggtcgggaagaaaccaggaaggttccagagaaggtatctgtatgg
ccagctggccacaaacaatactcatgtggttgcaagaactccttgaccagtgtttcccaa
aatctgttccttgatatatccctattcggcaagagccatgaggatgaagatttatctgct
ggaatctccagtgtctggacccggcacaaagaaacctggtcatactatgtgaacaaagac
atgtacattttgacaagttcctatggagtaaaactagcctcaattcagaaatacacttta
tctctgagaatgggtgtctatgatcctcagacagttcttggagagctccccagcgctttc
agagtaaagctcaagctcacaaggatttctgggcagtggtatactggtaaaggtgtgacc
agttctctgggccccggagacgtgtggcatgatttctctctcaagcctgcaacaccattg
gaagaggatttatcaggccatggagtctctctgagaagtcagtcagcaaaaagcagcctc
tggcaccagccatcacttcagtggcctctacagatatctcacatcttagggatggtggtc
ttgaatctaggaatccaagatgcaaaaacagatggcaagtggggttacttgccccacatc
acaaagcatgttagtggcagtgccaagatttacacccaggagctgtcaaatagtcatgcc
ctgaaacgacaaatccagcacaacaaataccctgtgacagcacagcgcgtcacccaacct
gctgcgacaatcgccagccgcgtaaagccagccaaaatcatcaaatctactttgccaaga
gaaatgaaggacatactggtttgtgctaaatcttctcaattacctcacttcatagactga

>gi568815597f:168476638_168681217|GENSCAN_predicted_peptide_8|662_aa
MKRGLLPNSFYEASIILIQKPGRDTKKKNLGPMSLMNIDAKIPNKILENQMQQHIKKLIH
HDQVSFTPGMQGWFNIGKSINVIHHVNRTNDKNHIIISIDAEKAFDNIQHPFMSKTVHKL
EKPQGNQIFKRLLEVYSGSQQKENMEHRALVLEVLARAIRQEKEIKGIQVGKEEVKLSLF
ADDMIVYPENPTVSAQNLLKLIRNFSKVSGYKINVQKSQAFLYTNNTQTESQIMSELPFT
IASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWRNIPCSWVGRINIVKMAILPK
EIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRALIAKSILSQKNKAEGITLPDFKLYYK
ATVTKTAWYWYQNRDIDQWNRTEPSEIMLHIYNYLIFDKPEKNKKWGKDSLFNKWCWQNW
LAICRKLKLDPFLTPYTKINLRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPK
AMATKAKIDKWDLIKLKSFCTAKETTIRTSILKRDTQKDTDTGNRGEGYVDMEADIEVVQ
PQVKEHLEHQSPIISRRTDCGLTQSTHSGTGADGTSSIFKIWFLRLLQEHTSREWTIKER
EYEGLHGSFRKESPKESVLQEALSSNGMREDLEEEIRAWRGSVTSIEGNGQPEIPSLWTQ
AK

>gi568815597f:168476638_168681217|GENSCAN_predicted_CDS_8|1989_bp
atgaaaaggggactcctccctaactcattttatgaggccagcatcatcctgatacaaaaa
cctggcagagacacaaaaaagaaaaacctcgggccaatgtccctgatgaacattgatgca
aaaatccccaataaaatactggaaaaccaaatgcagcagcacatcaaaaagcttatccac
catgatcaagtcagcttcacccctgggatgcaaggctggttcaacataggcaaatcaata
aatgtaatccatcatgtaaacagaaccaatgacaaaaaccacataattatctcaatagat
gcagaaaaggccttcgataacattcaacatcccttcatgtcaaaaactgtccataagcta
gaaaagcctcaaggaaaccaaatttttaagaggttacttgaggtctactctgggtcccaa
cagaaggaaaatatggaacacagggctctagtgttggaagttctggccagggcaattagg
caggagaaggaaataaagggtattcaagtaggaaaagaggaagtcaaattgtccctgttt
gcagatgacatgattgtatatccagaaaaccccactgtctcagcccaaaatctccttaag
ctgataagaaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaatcacaagca
ttcttatacacgaataacacacaaacagagagccaaatcatgagtgaactcccattcaca
attgcttcaaagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctc
ttcaaggagaactacaaaccactgctcaatgaaattaaagaggatacaaacaaatggagg
aacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaag
gaaatttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattg
gaaaaaactactttaaagttcatatggaaccaaaaaagggccctcattgccaagtcaatc
ctaagccaaaagaacaaagctgaaggcatcacgctacctgacttcaaactatactacaag
gctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaatggaac
agaacagagccctcagaaataatgctgcatatctacaactatctgatctttgacaaacct
gagaaaaacaagaaatggggaaaggattccctatttaacaaatggtgctggcaaaactgg
ctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaat
ttaagatggattaaagacttaaatgttagacctaaaaccataaaaaccctagaagaaaac
ctaggcattaccattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaa
gcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgc
acagcaaaagaaactaccatcagaacaagtattcttaaaagagacacgcagaaggataca
gacacaggcaacaggggagaaggatatgtggatatggaagcagatattgaagttgtgcag
ccacaagtcaaggaacacttggagcaccaaagtccaatcatcagtaggagaacggattgt
gggcttactcaaagcacccactcaggaactggtgctgatggaacctcttccatcttcaaa
atatggtttctaaggttgctccaagagcatacatccagggaatggaccatcaaggaaaga
gagtatgaaggattacatggaagcttcaggaaagagagcccaaaagagagtgttcttcaa
gaagctttgagttcaaatgggatgagagaagatttagaggaagagatcagagcctggaga
gggagcgtcactagcatagagggtaatggtcagccagagatcccaagcctttggactcag
gctaaataa