GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:04:16

Sequence gi568815597f:161526588_161708214 : 181627 bp : 43.34% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    205    200    6                               1.05
 1.07 Term -   4213   4031  183  1  0  103   49   105 0.300   5.64
 1.06 Intr -  11591  11504   88  1  1   97   54    68 0.177   4.27
 1.05 Intr -  13971  13866  106  1  1    1   30   120 0.189  -3.23
 1.04 Intr -  18371  18114  258  0  0   97  100   115 0.884  11.03
 1.03 Intr -  22091  21834  258  0  0   91  109   243 0.994  24.13
 1.02 Intr -  22444  22424   21  2  0  110  105    28 0.940   4.22
 1.01 Init -  23149  23110   40  1  1   81   97    61 0.694   4.78
 1.00 Prom -  24415  24376   40                              -6.66

 2.00 Prom +  34730  34769   40                              -6.16
 2.01 Init +  38639  38641    3  1  0   72  115     0 0.178   1.10
 2.02 Intr +  54779  54962  184  1  1   90   92    24 0.490   2.36
 2.03 Term +  56503  56597   95  2  2   92   42   125 0.862   6.29
 2.04 PlyA +  58564  58569    6                               1.05

 3.00 Prom +  59576  59615   40                              -4.76
 3.01 Init +  60895  60948   54  0  0   99   90     3 0.829   0.89
 3.02 Intr +  61835  61855   21  1  0  113  119    -6 0.800   2.74
 3.03 Intr +  63013  63232  220  0  1  -24   65   211 0.897   5.47
 3.04 Intr +  64557  64811  255  1  0   98   86   243 0.997  22.52
 3.05 Intr +  65542  65655  114  2  0   92   72   120 0.984  11.22
 3.06 Intr +  66839  66895   57  0  0   94  109    24 0.764   3.96
 3.07 Intr +  74353  74479  127  2  1   77  103    74 0.236   7.54
 3.08 Intr +  79682  80711 1030  2  1   18  -86  2139 0.047 180.07
 3.09 Term +  80725  81630  906  0  0  -34   42  1240 0.547  99.50
 3.10 PlyA +  81824  81829    6                               1.05

 4.08 PlyA -  81845  81840    6                               1.05
 4.07 Term -  85818  85636  183  0  0   90   45   105 0.636   3.94
 4.06 Intr -  93016  92837  180  1  0   94   28    99 0.395   4.56
 4.05 Intr -  94209  94130   80  1  2   43  113   -11 0.262  -3.83
 4.04 Intr -  99815  99558  258  0  0  102  100   114 0.885  11.43
 4.03 Intr - 103448 103191  258  0  0   91  109   283 0.995  28.13
 4.02 Intr - 103801 103781   21  2  0  113  105    28 0.951   4.52
 4.01 Init - 104507 104468   40  2  1   81   97    61 0.852   4.78
 4.00 Prom - 105778 105739   40                              -6.66

 5.00 Prom + 116075 116114   40                              -6.16
 5.01 Init + 120029 120031    3  1  0   72  115     0 0.087   1.10
 5.02 Intr + 136583 136766  184  1  1   90   92    24 0.385   2.36
 5.03 Intr + 143665 143685   21  2  0  113  119     5 0.539   3.62
 5.04 Intr + 144805 145062  258  2  0   98   65   269 0.752  23.03
 5.05 Intr + 146388 146642  255  1  0  105   91   243 0.860  23.72
 5.06 Intr + 147373 147486  114  2  0   92   72   120 0.999  11.22
 5.07 Intr + 148670 148726   57  0  0   94  109    13 0.851   2.86
 5.08 Intr + 150741 150778   38  1  2  116   84    33 0.994   3.68
 5.09 Term + 150889 150966   78  0  0   97   34   109 0.973   4.16
 5.10 PlyA + 151448 151453    6                               1.05

 6.03 PlyA - 152517 152512    6                               1.05
 6.02 Term - 158566 158258  309  1  0  -49   54   287 0.314   6.66
 6.01 Init - 162851 162708  144  2  0   69   75    87 0.975   5.62
 6.00 Prom - 163690 163651   40                              -5.16

 7.00 Prom + 163832 163871   40                              -6.66
 7.01 Init + 167580 167725  146  2  2   68   98    85 0.839   7.09
 7.02 Intr + 170225 170547  323  2  2   42   40   183 0.202   4.40
 7.03 Term + 171198 171370  173  1  2   87   41   132 0.300   6.39
 7.04 PlyA + 171478 171483    6                               1.05

 8.00 Prom + 172223 172262   40                              -2.06
 8.01 Init + 180678 180756   79  2  1  104  106   113 0.898  13.93

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  79704  80711 1008  2  0   85  -86  2112 0.929 187.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:161526588_161708214|GENSCAN_predicted_peptide_1|317_aa
MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDNSTQW
FHNESLISSQASSYFIDAATVDDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
EDPIHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKATLKDSGSYFCRGLFGSKN
VSSETVNITITQAAKSYHYNPSRKNQIPQNYPYSTKAEEDIGNHTTRRPVELAIWASVMD
CLLPGSSIVTDRIRSGMLPAPQLFETPHWIRRVSDSATVIGAEDPRETGRHRVYLDMARP
LYRSRGALEESPGKMEP

>gi568815597f:161526588_161708214|GENSCAN_predicted_CDS_1|954_bp
atgtggcagctgctcctcccaactgctctgctacttctagtttcagctggcatgcggact
gaagatctcccaaaggctgtggtgttcctggagcctcaatggtacagggtgctcgagaag
gacagtgtgactctgaagtgccagggagcctactcccctgaggacaattccacacagtgg
tttcacaatgagagcctcatctcaagccaggcctcgagctacttcattgacgctgccaca
gtcgacgacagtggagagtacaggtgccagacaaacctctccaccctcagtgacccggtg
cagctagaagtccatatcggctggctgttgctccaggcccctcggtgggtgttcaaggag
gaagaccctattcacctgaggtgtcacagctggaagaacactgctctgcataaggtcaca
tatttacagaatggcaaaggcaggaagtattttcatcataattctgacttctacattcca
aaagccacactcaaagacagcggctcctacttctgcagggggctttttgggagtaaaaat
gtgtcttcagagactgtgaacatcaccatcactcaagcagctaagagttatcactacaac
cctagtcggaaaaaccaaatacctcaaaattacccgtacagcactaaggcagaagaggac
attgggaaccacacaacgcggagacctgtggagctggcaatatgggcaagtgtcatggac
tgtctactgccaggaagctccattgtcaccgacaggatcagaagtggcatgctcccagct
ccgcagctgttcgagactccgcactggatccgccgggtgtcggattcagcaacagtgatt
ggtgcggaggatccgagggagacgggccgacacagggtctaccttgacatggctcgaccc
ctctacagaagcagaggggcgctcgaagagtcgccagggaaaatggagccttaa

>gi568815597f:161526588_161708214|GENSCAN_predicted_peptide_2|93_aa
MGRIRQALREGCDCCALGASSLQGVMGILSFLPVLATESDWADCKSPQPWGHMLLWTAVL
FLGTVLGLGDLSVNMTDSLPDRKYEVNELIVKQ

>gi568815597f:161526588_161708214|GENSCAN_predicted_CDS_2|282_bp
atgggtagaatccgccaagctttgagagaaggctgtgactgctgtgctctgggcgccagc
tcgctccagggagtgatgggaatcctgtcattcttacctgtccttgccactgagagtgac
tgggctgactgcaagtccccccagccttggggtcatatgcttctgtggacagctgtgcta
ttcctgggcactgttctaggacttggagacttatcagtgaacatgactgacagccttcct
gaccggaaatacgaggtcaatgaacttattgtgaagcaataa

>gi568815597f:161526588_161708214|GENSCAN_predicted_peptide_3|927_aa
MGGERWLTPVIPEFWEAELLLLGHLWINVLQEDSVTLTCRGTHSPESDSIPWFHNGNLIP
THTQPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRC
HSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTI
TVQAPSSSPMGIIVAVVTGIAVAAIVAAVVALIYCRKKRISALSGYPECREMGETLPEKP
AILDIKNLLFHIHTANTINQTTVMKRCSNMRNAYVTGYMRTIIIRQEASAMQAPRELAVG
IDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPHNTVF
DAKRLIGRKFADTTVQSDMKHWPFQVVSEGGKPKVRVCYRGEDKTFYPEEISSMVLSKMK
ETAEAYLGQPVKHAVITVPTYFSNSQRQATKDAGAIAGLKVLPIINEATAAAIAYGLDRR
GAGKRNVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRK
HGKDLSGNKRALRRLRTACERAKRTPSSSTQATLEIDSLFEGVDFYKSITRARFEELCSD
LFRSTLEPVEKALRDAKLDKAQIHDFGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYG
AAVQAAVLMGDKCEKVQDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYS
DNQPGVFIQVYEVERAMTKDNNLLGRFELIGIPPAPHGVPQIEVTFDIDANGILSVTATD
RSTGKANKITNDKGRLSKEEVERMVHEAEQYGAEDEAQRDRVAAKNSLEAHVFHVKGSLQ
EESLRDKIPEEDRRKVQDKCQEVLAWLEHNQLAEKEEYEHQKRELEQICRPIFSRLYGGP
GVPGGSSCSAQAHQGDPSTGPIIEEVD

>gi568815597f:161526588_161708214|GENSCAN_predicted_CDS_3|2784_bp
atgggcggggaacggtggctcacacctgtaatcccagaattttgggaggctgagctcctg
ttgctgggacacctgtggatcaacgtgctccaagaggactctgtgactctgacatgccgg
gggactcacagccctgagagcgactccattccgtggttccacaatgggaatctcattccc
acccacacgcagcccagctacaggttcaaggccaacaacaatgacagcggggagtacacg
tgccagactggccagaccagcctcagcgaccctgtgcatctgactgtgctttctgagtgg
ctggtgctccagacccctcacctggagttccaggagggagaaaccatcgtgctgaggtgc
cacagctggaaggacaagcctctggtcaaggtcacattcttccagaatggaaaatccaag
aaattttcccgttcggatcccaacttctccatcccacaagcaaaccacagtcacagtggt
gattaccactgcacaggaaacataggctacacgctgtactcatccaagcctgtgaccatc
actgtccaagctcccagctcttcaccgatggggatcattgtggctgtggtcactgggatt
gctgtagcggccattgttgctgctgtagtggccttgatctactgcaggaaaaagcggatt
tcagctctctcaggataccctgagtgcagggaaatgggagagaccctccctgagaaacca
gccattcttgacatcaagaatcttctgttccacatccacacagccaatacaattaatcaa
accactgttatgaaaagatgtagcaacatgagaaatgcttatgttacaggttacatgaga
acaatcatcatccgacaagaagcttcagccatgcaggccccacgggagctcgcggtgggc
atcgacctgggcaccacctactcgtgcgtgggcgtgtttcagcagggccgcgtggagatc
ctggccaacgaccagggcaaccgcaccacgcccagctacgtggccttcaccgacaccgag
cggctggtcggggacgcggccaagagccaggcggccctgaacccccacaacaccgtgttc
gatgccaagcggctgatcgggcgcaagttcgcggacaccacggtgcagtcggacatgaag
cactggcccttccaggtggtgagcgagggcggcaagcccaaggtgcgcgtatgctaccgc
ggggaggacaagacgttctaccccgaggagatctcgtccatggtgctgagcaagatgaag
gagacggccgaggcgtacctgggccagcccgtgaagcacgcagtgatcaccgtgcccacc
tatttcagtaactcgcagcgccaggccaccaaggacgcgggggccatcgcggggctcaag
gtgctgccgatcatcaatgaggccacggcagcagccatcgcctatgggctggaccggcgg
ggcgcgggaaagcgcaacgtgctcatttttgacctgggtgggggcaccttcgatgtgtcg
gttctctccattgacgccggtgtctttgaggtgaaagccactgctggagatacccacctg
ggaggagaggacttcgacaaccggctcgtgaaccacttcatggaagaattccggcggaag
catgggaaggacctgagcgggaacaagcgtgccctgcgcaggctgcgcacagcctgtgag
cgcgccaagcgcaccccgtcctccagcacccaggccaccctggagatagactccctgttc
gagggcgtggacttctacaagtccatcactcgtgcccgctttgaggaactgtgctcagac
ctcttccgcagcaccctggagccggtggagaaggccctgcgggatgccaagctggacaag
gcccagattcatgacttcggctccactcgcatccccaaggtgcagaagttgctgcaggac
ttcttcaacggcaaggagctgaacaagagcatcaaccctgatgaggctgtggcctatggg
gctgctgtgcaggcggccgtgttgatgggggacaaatgtgagaaagtgcaggatctcctg
ctgctggatgtggctcccctgtctctggggctggagacagcaggtggggtgatgaccacg
ctgatccagaggaacgccactatccccaccaagcagacccagactttcaccacctactcg
gacaaccagcctggggtcttcatccaggtgtatgaggttgagagggccatgaccaaggac
aacaacctgctggggcgttttgaactcattggcatccctcctgccccacatggagtcccc
cagatagaggtgacgtttgacattgatgctaatggcatcctgagcgtgacagccactgac
aggagcacaggtaaggctaacaagatcaccaatgacaagggccggctgagcaaggaggag
gtggagaggatggttcatgaagccgagcagtacggggctgaggatgaggcccagagggac
agagtggctgccaaaaactcgctggaggcccatgtcttccatgtgaaaggttctttgcaa
gaggaaagccttagggacaagattcccgaagaggacaggcgcaaagtgcaagacaagtgt
caggaagtccttgcctggctggagcacaaccagctggcagagaaggaggagtatgagcat
cagaagagggagctggagcaaatctgtcgccccatcttctccaggctctatggggggcct
ggtgtccctgggggcagcagttgtagcgctcaagcccaccagggggaccccagcaccggc
cccatcattgaggaggttgattga

>gi568815597f:161526588_161708214|GENSCAN_predicted_peptide_4|339_aa
MWQLLLPTALLLLVSAGMRTEDLPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQW
FHNENLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKE
EDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKN
VSSETVNITITQGVFPNVIPPPFPTHDRSRCVMFPTRAHTCGAGNMGKCHGLSTSRKLHC
HRQDQKWHGKWYKKAHSGTVLKTSPFGGASHAKGIGLEKLPAPQLFETPHWIRRVSDSAT
VIGAEDPRETGRHRVYLDMARPLYRSRGALEESPGKMEP

>gi568815597f:161526588_161708214|GENSCAN_predicted_CDS_4|1020_bp
atgtggcagctgctcctcccaactgctctgctacttctagtttcagctggcatgcggact
gaagatctcccaaaggctgtggtgttcctggagcctcaatggtacagcgtgcttgagaag
gacagtgtgactctgaagtgccagggagcctactcccctgaggacaattccacacagtgg
tttcacaatgagaacctcatctcaagccaggcctcgagctacttcattgacgctgccaca
gtcaacgacagtggagagtacaggtgccagacaaacctctccaccctcagtgacccggtg
cagctagaagtccatatcggctggctgttgctccaggcccctcggtgggtgttcaaggag
gaagaccctattcacctgaggtgtcacagctggaagaacactgctctgcataaggtcaca
tatttacagaatggcaaagacaggaagtattttcatcataattctgacttccacattcca
aaagccacactcaaagatagcggctcctacttctgcagggggcttgttgggagtaaaaat
gtgtcttcagagactgtgaacatcaccatcactcaaggtgtttttcctaatgttatccct
ccccccttccccacccacgacaggtcccggtgtgtgatgttccccacccgtgcacacacc
tgtggagctggcaatatgggcaagtgtcatggactgtctacctccaggaagctccattgt
caccgacaggatcagaagtggcatggtaaatggtacaagaaagcccattcgggcacagtc
ctgaagaccagcccttttggaggtgcttctcatgcaaagggaattgggctggaaaaactc
ccagctccgcagctgttcgagactccgcactggatccgccgggtgtcggattcagcaaca
gtgattggtgcggaggatccgagggagacgggccgacacagggtctaccttgacatggct
cgacccctctacagaagcagaggggcgctcgaagagtcgccagggaaaatggagccttaa

>gi568815597f:161526588_161708214|GENSCAN_predicted_peptide_5|335_aa
MGRIRQALREGCDCCALGASSLQGVMGILSFLPVLATESDWADCKSPQPWGHMLLWTAVL
FLAPVAGTPAAPPKAVLKLEPQWINVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHT
QPSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSW
KDKPLVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQ
APSSSPMGIIVAVVTGIAVAAIVAAVVALIYCRKKRISALPGYPECREMGETLPEKPANP
TNPDEADKVGAENTITYSLLMHPDALEEPDDQNRI

>gi568815597f:161526588_161708214|GENSCAN_predicted_CDS_5|1008_bp
atgggtagaatccgccaagctttgagagaaggctgtgactgctgtgctctgggcgccagc
tcgctccagggagtgatgggaatcctgtcattcttacctgtccttgccactgagagtgac
tgggctgactgcaagtccccccagccttggggtcatatgcttctgtggacagctgtgcta
ttcctggctcctgttgctgggacacctgcagctcccccaaaggctgtgctgaaactcgag
ccccagtggatcaacgtgctccaggaggactctgtgactctgacatgccgggggactcac
agccctgagagcgactccattcagtggttccacaatgggaatctcattcccacccacacg
cagcccagctacaggttcaaggccaacaacaatgacagcggggagtacacgtgccagact
ggccagaccagcctcagcgaccctgtgcatctgactgtgctttctgagtggctggtgctc
cagacccctcacctggagttccaggagggagaaaccatcgtgctgaggtgccacagctgg
aaggacaagcctctggtcaaggtcacattcttccagaatggaaaatccaagaaattttcc
cgttcggatcccaacttctccatcccacaagcaaaccacagtcacagtggtgattaccac
tgcacaggaaacataggctacacgctgtactcatccaagcctgtgaccatcactgtccaa
gctcccagctcttcaccgatggggatcattgtggctgtggtcactgggattgctgtagcg
gccattgttgctgctgtagtggccttgatctactgcaggaaaaagcggatttcagctctc
ccaggataccctgagtgcagggaaatgggagagaccctccctgagaaaccagccaatccc
actaatcctgatgaggctgacaaagttggggctgagaacacaatcacctattcacttctc
atgcacccggatgctctggaagagcctgatgaccagaaccgtatttag

>gi568815597f:161526588_161708214|GENSCAN_predicted_peptide_6|150_aa
MEKREKKADEQGTLEPGEQNGDEFRRFSFCFMYATSGAEKASNPEMPKVVTREYTINIHK
HIHGVGFKKCAPRALKELRKFGMKEMGTPDARIDIRLNKAVWAKGIRMSHTESVCGCPEN
VMRMKIHQISSILWLPMYLLPLLKIYSQCG

>gi568815597f:161526588_161708214|GENSCAN_predicted_CDS_6|453_bp
atggagaaaagagaaaagaaagcagatgagcaagggaccttggaacctggggaacaaaat
ggtgatgagttccgtaggttttctttttgtttcatgtatgctacatctggagctgaaaaa
gccagcaacccagaaatgccaaaggtggtgacccgagaatacaccatcaacattcacaag
cacatccatggagtgggcttcaagaagtgtgcccctcgggcactcaaagagcttcggaaa
tttggcatgaaggagatgggaactccagatgcgcgcattgatatcaggctcaacaaagct
gtctgggccaaaggaataagaatgtcccataccgaatccgtgtgcggctgtcccgaaaac
gtaatgaggatgaagattcaccaaataagctctatactttggttacctatgtacctgttg
ccacttttgaaaatctacagtcaatgtggatga

>gi568815597f:161526588_161708214|GENSCAN_predicted_peptide_7|213_aa
MRKNQCKNTENSKNQNASSPPNDHNSSLARAQNWKENENDELTEVGFRSIILIPKPGRYT
TKKENVRPISLMDTDEKILNKMLANQIQQHIKKLIHHGQVGFIPGMQGLFNIHKSIKVIH
HINRTNDKNHMIISIDAEKAFDKIQHPFMLKTLNKLDLEKTTLNFVWNQKAARIAKTILS
KKNKAGGIMQPDFKQNYKATVTKMHDTGTKTDM

>gi568815597f:161526588_161708214|GENSCAN_predicted_CDS_7|642_bp
atgaggaaaaaccaatgcaaaaacactgaaaactccaaaaaccagaatgcctcttctcct
ccaaatgatcacaactcctctctagcaagggcacaaaactggaaggagaatgagaatgac
gaattgacagaagtaggcttcagaagcatcatcctgataccaaaacctggcagatacaca
actaaaaaagaaaatgtcaggccaatatccctgatggacaccgatgagaaaatcctcaat
aaaatgctggcaaaccaaatccagcagcacatcaaaaagcttatccaccatggtcaagtt
ggcttcatccctgggatgcaaggcttgttcaacatacacaaatcaataaaggtaatccat
cacataaacagaaccaatgacaaaaaccacatgattatctcaatagatgcagagaaggcc
ttcgataaaattcaacatcccttcatgctaaaaactctcaataaactagacttagaaaaa
actactttaaatttcgtgtggaaccaaaaagcagcccgtatagccaagacaatcctaagc
aaaaagaacaaagctggaggcatcatgcaacctgacttcaaacaaaactacaaggctaca
gtaaccaaaatgcatgatactggtaccaaaacagatatgtag

>gi568815597f:161526588_161708214|GENSCAN_predicted_peptide_8|27_aa
MKLGCVLMAWALYLSLGVLWVAQMLLX

>gi568815597f:161526588_161708214|GENSCAN_predicted_CDS_8|81_bp
atgaagctgggctgtgtcctcatggcctgggccctctacctttcccttggtgtgctctgg
gtggcccagatgctactggnn