GENSCAN 1.0	Date run:  6-Nov-116	Time: 19:00:34

Sequence gi568815597f:109556711_109688168 : 131458 bp : 45.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5238   5295   58  2  1   67  105     8 0.387   1.87
 1.02 Intr +  17027  17069   43  0  1  103  100    40 0.902   4.00
 1.03 Intr +  17186  17327  142  2  1   75   92   121 0.999  11.56
 1.04 Intr +  22494  22651  158  2  2   89   92    46 0.983   3.91
 1.05 Intr +  25727  25855  129  2  0   16  108    86 0.678   3.21
 1.06 Intr +  29506  29635  130  1  1  105   80   116 0.997  13.20
 1.07 Intr +  30019  30172  154  0  1  113  110    31 0.999   7.45
 1.08 Term +  35333  35523  191  0  2   63   54   190 0.999  10.71
 1.09 PlyA +  38296  38301    6                               1.05

 2.09 PlyA -  38979  38974    6                               1.05
 2.08 Term -  46834  46644  191  2  2   43   36   271 0.999  15.01
 2.07 Intr -  47394  47241  154  0  1   70  115    56 0.988   6.15
 2.06 Intr -  49389  49260  130  2  1   97   89   127 0.995  14.40
 2.05 Intr -  49726  49598  129  0  0   68  111   126 0.999  12.71
 2.04 Intr -  52078  51921  158  1  2   71   46   130 0.951   5.91
 2.03 Intr -  53471  53330  142  1  1   79   80   253 0.696  23.96
 2.02 Intr -  53797  53755   43  2  1   53   81    57 0.957  -1.20
 2.01 Init -  56160  56043  118  0  1   67   92   190 0.987  17.66
 2.00 Prom -  59597  59558   40                              -7.06

 3.00 Prom +  62568  62607   40                              -4.36
 3.01 Init +  64304  64556  253  1  1   79  109   203 0.932  19.03
 3.02 Intr +  68593  68723  131  2  2   99   54   121 0.979  10.21
 3.03 Intr +  68952  69082  131  2  2  127   63   251 0.999  25.99
 3.04 Intr +  69450  69518   69  0  0  119   51   120 0.999   9.70
 3.05 Intr +  69609  69717  109  0  1   98   98   160 0.999  18.29
 3.06 Intr +  70016  70202  187  1  1   73   48   378 0.999  31.56
 3.07 Intr +  70465  70606  142  2  1  129   55   221 0.989  22.31
 3.08 Intr +  70719  70808   90  0  0   66   84   166 0.999  13.11
 3.09 Intr +  71064  71193  130  0  1   75   86   238 0.999  23.00
 3.10 Intr +  71373  71567  195  2  0   93   26   438 0.743  37.71
 3.11 Intr +  71654  71785  132  1  0  105  116   221 0.998  27.44
 3.12 Intr +  71933  72096  164  1  2   80   70   270 0.997  23.17
 3.13 Intr +  72399  72525  127  0  1   83   68   137 0.997  11.88
 3.14 Intr +  72617  72780  164  1  2   42   51   293 0.998  19.77
 3.15 Intr +  73086  73206  121  0  1  118   77    84 0.999  10.80
 3.16 Intr +  73523  73696  174  1  0  104   77   316 0.982  32.24
 3.17 Intr +  73973  74083  111  1  0   39   74   240 0.997  18.28
 3.18 Intr +  74233  74413  181  0  1  115   36   382 0.812  35.14
 3.19 Intr +  94654  94834  181  2  1   84  -42   154 0.089   0.93
 3.20 Term +  97973  98081  109  2  1  117   49   133 0.721  10.28
 3.21 PlyA +  98352  98357    6                               1.05

 4.00 Prom +  98847  98886   40                              -9.06
 4.01 Init +  99680  99715   36  1  0   74   84    61 0.942   4.32
 4.02 Intr + 100002 100077   76  2  1   90   47   126 0.651   7.79
 4.03 Intr + 100505 100569   65  0  2   81   51    50 0.779  -0.96
 4.04 Intr + 100880 100961   82  1  1   73   56   149 0.602   9.41
 4.05 Intr + 101062 101162  101  2  2   62   59   192 0.989  13.53
 4.06 Intr + 102104 102199   96  1  0   80   90    66 0.855   6.21
 4.07 Intr + 102290 102400  111  1  0   88   49   136 0.868  10.28
 4.08 Term + 104455 104544   90  0  0  103   38    81 0.900   2.32
 4.09 PlyA + 104973 104978    6                               1.05

 5.00 Prom + 110466 110505   40                              -8.76
 5.01 Init + 111406 111441   36  0  0   98   72    71 0.797   6.51
 5.02 Intr + 111715 111790   76  0  1   69   47   118 0.943   4.89
 5.03 Intr + 112215 112283   69  1  0   86   29    77 0.398   0.75
 5.04 Intr + 112488 112661  174  1  0   10   56   237 0.674  12.61
 5.05 Intr + 112761 112861  101  1  2  -21   78   199 0.993   7.83
 5.06 Intr + 112926 113003   78  2  0  115  113    -1 0.897   4.85
 5.07 Intr + 114577 114672   96  0  0   88   90    81 0.697   8.51
 5.08 Intr + 114763 114873  111  0  0   51   49   137 0.693   6.68
 5.09 Term + 118037 118126   90  1  0  103   49   113 0.907   6.62
 5.10 PlyA + 120767 120772    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:109556711_109688168|GENSCAN_predicted_peptide_1|334_aa
MSEQIDLIEMKGWYRKSVEGAGESGKSTIVKQMKIIHEDGYSEDECKQYKVVVYSNTIQS
IIAIIRAMGRLKIDFGEAARADDARQLFVLAGSAEEGVMTPELAGVIKRLWRDGGVQACF
SRSREYQLNDSASYYLNDLDRISQSNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFD
VGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFT
ETSIILFLNKKDLFEEKIKRSPLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIY
THFTCATDTKNVQFVFDAVTDVIIKNNLKECGLY

>gi568815597f:109556711_109688168|GENSCAN_predicted_CDS_1|1005_bp
atgagtgagcaaatagatttgattgaaatgaagggttggtacaggaagagtgtagaaggt
gctggagaatctggtaaaagcaccattgtgaaacagatgaaaatcattcatgaggatggc
tattcagaggatgaatgtaaacaatataaagtagttgtctacagcaatactatacagtcc
atcattgcaatcataagagccatgggacggctaaagattgactttggggaagctgccagg
gcagatgatgcccggcaattatttgttttagctggcagtgctgaagaaggagtcatgact
ccagaactagcaggagtgattaaacggttatggcgagatggtggggtacaagcttgcttc
agcagatccagggaatatcagctcaatgattctgcttcatattatctaaatgatctggat
agaatatcccagtctaactacattccaactcagcaagatgttcttcggacgagagtgaag
accacaggcattgtagaaacacatttcaccttcaaagacctatacttcaagatgtttgat
gtaggtggccaaagatcagaacgaaaaaagtggattcactgttttgagggagtgacagca
attatcttctgtgtggccctcagtgattatgaccttgttctggctgaggacgaggagatg
aaccgaatgcatgaaagcatgaaactgtttgacagcatttgtaataacaaatggtttaca
gaaacttcaatcattctcttccttaacaagaaagacctttttgaggaaaaaataaagagg
agtccgttaactatctgttatccagaatacacaggttccaatacatatgaagaggcagct
gcctatattcaatgccagtttgaagatctgaacagaagaaaagataccaaggagatctat
actcacttcacctgtgccacagacacgaagaatgtgcagtttgtttttgatgctgttaca
gatgtcatcattaaaaacaacttaaaggaatgtggactttattga

>gi568815597f:109556711_109688168|GENSCAN_predicted_peptide_2|354_aa
MGSGASAEDKELAKRSKELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDG
YSPEECLEFKAIIYGNVLQSILAIIRAMTTLGIDYAEPSCADDGRQLNNLADSIEEGTMP
PELVEVIRRLWKDGGVQACFERAAEYQLNDSASYYLNQLERITDPEYLPSEQDVLRSRVK
TTGIIETKFSVKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDDEV
NRMHESLHLFNSICNHKFFAATSIVLFLNKKDLFEEKIKKVHLSICFPEYDGNNSYDDAG
NYIKSQFLDLNMRKDVKEIYSHMTCATDTQNVKFVFDAVTDIIIKENLKDCGLF

>gi568815597f:109556711_109688168|GENSCAN_predicted_CDS_2|1065_bp
atgggaagtggagccagtgctgaggacaaagaactggccaagaggtccaaggagctagaa
aagaagctgcaggaggatgctgataaggaagccaagactgtcaagctgctactgctgggt
gctggggagtcaggaaagagcaccatcgtcaaacagatgaagatcattcaccaggatggc
tattcaccagaagaatgcctggagttcaaggctatcatctatggaaatgtgctgcagtcc
atcctggctatcatccgggccatgaccacactgggcatcgattatgctgaaccaagctgt
gcggatgacgggcgacagctcaacaacctggctgactccattgaggagggaaccatgcct
cctgagctcgtggaggtcattaggaggttgtggaaggatggtggggtgcaagcctgcttc
gagagagctgcagaataccagcttaatgactccgcatcttactacctgaaccaattagaa
cgaattacagaccctgagtacctccctagtgagcaagatgtgctccgatccagagtcaaa
accacgggcatcattgaaaccaagttttccgtcaaagacttgaatttcaggatgtttgat
gtgggagggcagagatccgagagaaagaagtggatccactgcttcgagggagtcacctgc
atcattttctgtgcagccctcagtgcctatgatatggtgctggtggaagatgacgaagtg
aatcgtatgcatgagtctttgcatctgttcaacagcatatgtaaccacaaattctttgcg
gctacttccattgtcctctttctcaacaagaaggacctctttgaggaaaaaatcaagaaa
gtccatctcagcatttgttttccagagtatgatggtaacaactcctatgatgatgcgggg
aattacataaagagccagttccttgacctcaatatgcgaaaagatgtcaaagaaatctac
agtcacatgacctgtgctacagatacacagaatgtcaaatttgtgtttgatgcagttaca
gatattatcatcaaagaaaacctcaaggactgcggcctcttctaa

>gi568815597f:109556711_109688168|GENSCAN_predicted_peptide_3|966_aa
MRNRGQGLFRLRSRCFLHQSLPLGAGRRKGLDVAEPGPSRCRSDSPAVAAVVPAMASYPS
GSGKPKAKYPFKKRASLQASTAAPEARGGLGAPPLQSARSLPGPAPCLKHFPLDLRTSMD
GKCKEIAEELFTRSLAESELRSAPYEFPEESPIEQLEERRQRLERQISQDVKLEPDILLR
AKQDFLKTDSDSDLQLYKEQGEGQGDRSLRERDVLEREFQRVTISGEEKCGVPFTDLLDA
AKSVVRALFIREKYMALSLQSFCPTTRRYLQQLAEKPLETRTYEQGPDTPVSADAPVHPP
ALEQHPYEHCEPSTMPGDLGLGLRMVRGVVHVYTRREPDEHCSEVELPYPDLQEFVADVN
VLMALIINGPIKSFCYRRLQYLSSKFQMHVLLNEMKELAAQKKVPHRDFYNIRKVDTHIH
ASSCMNQKHLLRFIKRAMKRHLEEIVHVEQGREQTLREVFESMNLTAYDLSVDTLDVHAD
RNTFHRFDKFNAKYNPIGESVLREIFIKTDNRVSGKYFAHIIKEVMSDLEESKYQNAELR
LSIYGRSRDEWDKLARWAVMHRVHSPNVRWLVQVPRLFDVYRTKGQLANFQEMLENIFLP
LFEATVHPASHPELHLFLEHVDGFDSVDDESKPENHVFNLESPLPEAWVEEDNPPYAYYL
YYTFANMAMLNHLRRQRGFHTFVLRPHCGEAGPIHHLVSAFMLAENISHGLLLRKAPVLQ
YLYYLAQIGIAMSPLSNNSLFLSYHRNPLPEYLSRGLMVSLSTDDPLQFHFTKEPLMEEY
SIATQVWKLSSCDMCELARNSVLMSGFSHKVKSHWLGPNYTKEGPEGNDIRRTNVPDIRV
GYRYETLCQELALITQAVQSEMLETIPEEAAGTIEGVKEKKKKVPAVPETLQKKKRNFAE
LKIKCLRNKFAQKMLQKARRKLICEKANRQIPTSRPGVILVATVAPTLEILLVQFFPPSA
EPYSSF

>gi568815597f:109556711_109688168|GENSCAN_predicted_CDS_3|2901_bp
atgagaaatcgtggccagggcctcttccgcctgcggagccgctgcttcctgcatcagtca
ctcccgctgggggcggggcggaggaaggggttggatgtggcagagccaggccccagccgg
tgccgctcagactcccccgctgtcgccgccgtggtcccagccatggcatcctatccatct
ggctctggcaagcccaaggccaaatatccctttaagaagcgggccagcctgcaggcctcc
actgcagctccagaggctcggggtggtctgggggcccctccgctgcagtctgcccgatcc
ctgccgggccccgccccctgcctcaagcacttcccgctcgacctgcgcacgtctatggat
ggcaaatgcaaggagatcgccgaggagctgttcacccgctcactggctgagagcgagctc
cgtagtgccccgtatgagttccccgaggagagccccattgaacagctggaggagcggcgg
cagcggctggagcggcagatcagccaggatgtcaagctggagccagacatcctgcttcgg
gccaagcaagatttcctgaagacggacagtgactcggacctacagctctacaaggaacag
ggtgaggggcagggtgaccggagcctgcgggagcgtgatgtgctggaacgggagtttcag
cgggtcaccatctctggggaggagaagtgtggggtgccgttcacagacctgctggatgca
gccaagagtgtggtgcgggcgctcttcatccgggagaagtacatggccctgtccctgcag
agcttctgccccaccacccgccgctacctgcagcagctggctgaaaagcctctggagacc
cggacctatgaacagggccccgacacccctgtgtctgctgatgccccggtgcacccccct
gcgctggagcagcacccgtatgagcactgtgagccaagcaccatgcctggggacctgggc
ttgggtctgcgcatggtgcggggtgtggtgcacgtctacacccgcagggaacccgacgag
cattgctcagaggtggagctgccataccctgacctgcaggaatttgtggctgacgtcaat
gtgctgatggccctgattatcaatggccccataaagtcattctgctaccgccggctgcag
tacctgagctccaagttccagatgcatgtgctactcaatgagatgaaggagctggccgcc
cagaagaaagtgccacaccgagatttctacaacatccgcaaggtggacacccacatccat
gcctcgtcctgcatgaaccagaagcatctgctgcgcttcatcaagcgggcaatgaagcgg
cacctggaggagatcgtgcacgtggagcagggccgtgaacagacgctgcgggaggtcttt
gagagcatgaatctcacggcctacgacctgagtgtggacacgctggatgtgcatgcggac
aggaacactttccatcgctttgacaagtttaatgccaaatacaaccctattggggagtcc
gtcctccgagagatcttcatcaagacggacaacagggtatctgggaagtactttgctcac
atcatcaaggaggtgatgtcagacctggaggagagcaaataccagaatgcagagctgcgg
ctctccatttacgggcgctcgagggatgagtgggacaagctggcgcgctgggccgtcatg
caccgcgtgcactcccccaacgtgcgctggctggtgcaggtgccccgcctctttgatgtg
taccgtaccaagggccagctggccaacttccaggagatgctggagaacatcttcctgcca
ctgttcgaggccactgtgcaccctgccagccacccggaactgcatctcttcttagagcac
gtggatggttttgacagcgtggatgatgagtccaagcctgaaaaccatgtcttcaacctg
gagagccccctgcctgaggcgtgggtggaggaggacaacccaccctatgcctactacctg
tactacacctttgccaacatggccatgttgaaccacctgcgcaggcagaggggcttccac
acgtttgtgctgaggccacactgtggggaggctgggcccatccaccacctggtgtcagcc
ttcatgctggctgagaacatttcccacgggctccttctgcgcaaggcccccgtcctgcag
tacctgtactacctggcccagatcggcatcgccatgtctccgctcagcaacaacagcctc
ttcctcagctatcaccggaatccgctaccggagtacctgtcccgcggcctcatggtctcc
ctgtccactgatgatcccttgcagttccacttcaccaaggagccgctgatggaggagtac
agcatcgccacccaggtgtggaagctcagctcctgcgatatgtgtgagctggcccgcaac
agcgtgctcatgagcggcttctcgcacaaggtaaagagccactggctgggacccaactat
accaaggaaggccctgaggggaatgacatccgccggaccaatgtgccagacatccgcgtg
ggctaccgctacgagaccctgtgccaggagctggcgctcatcacgcaggcagtccagagt
gagatgctggagaccattccagaggaggcggctggaaccatagagggtgtcaaagagaag
aagaagaaggttcctgctgtgccagaaacccttcagaaaaagaaaaggaattttgcagag
ctaaagatcaagtgcctgagaaataagtttgcccaaaagatgcttcaaaaggcaaggagg
aaacttatctgtgaaaaagcgaataggcagatacccacttcccgccctggtgtgatcctc
gtggccactgtggcccctactttggagatcctgctggtccagttcttcccgccttccgca
gagccgtactcctccttctga

>gi568815597f:109556711_109688168|GENSCAN_predicted_peptide_4|218_aa
MSMTLGYWDIRGLAHAIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNL
PYLIDGAHKITQSNAILCYIARKHNLCGETEEEKIRVDILENQAMDVSNQLARVCYSPDF
EKLKPEYLEELPTMMQHFSQFLGKRPWFVGDKITFVDFLAYDVLDLHRIFEPNCLDAFPN
LKDFISRFEGLEKISAYMKSSRFLPKPLYTRVAVWGNK

>gi568815597f:109556711_109688168|GENSCAN_predicted_CDS_4|657_bp
atgtccatgacactggggtactgggacatccgcgggctggcccacgccatccgcctgctc
ctggaatacacagactcaagctacgaggaaaagaagtatacgatgggggacgctcctgac
tatgacagaagccagtggctgaatgaaaaattcaagctgggcctggactttcccaatctg
ccctacttgattgatggggctcacaagatcacccagagcaacgccatcctgtgctacatt
gcccgcaagcacaacctgtgtggggagacagaagaggagaagattcgtgtggacattttg
gagaaccaggctatggacgtctccaatcagctggccagagtctgctacagccctgacttt
gagaaactgaagccagaatacttggaggaacttcctacaatgatgcagcacttctcacag
ttcctggggaagaggccatggtttgttggagacaagatcacctttgtagatttcctcgcc
tatgatgtccttgacctccaccgtatatttgagcccaactgcttggacgcctttccaaat
ctgaaggacttcatctcccgctttgagggcttggagaagatctctgcctacatgaagtcc
agccgcttcctcccaaaacctctgtacacaagggtggctgtctggggcaacaagtaa

>gi568815597f:109556711_109688168|GENSCAN_predicted_peptide_5|276_aa
MPMTLGYWNIRGLAHSIRLLLEYTDSSYEEKKYTMGDAPDYDRSQWLNEKFKLGLDFPNV
GPGLLFALAYGKGMLGSLVAQLSFPGFPSIQLPYLIDGTHKITQSNAILRYIARKHNLCG
ESEKEQIREDILENQFMDSRMQLAKLCYDPDFSLCPKLIPSGEFLVLLTLRMKPRSYTEK
LKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQVFEPSCLDAFPNLK
DFISRFEGLEKISAYMKSSRFLPRPVFTKMAVWGNK

>gi568815597f:109556711_109688168|GENSCAN_predicted_CDS_5|831_bp
atgcccatgacactggggtactggaacatccgcgggctggcccattccatccgcctgctc
ctggaatacacagactcaagctacgaggaaaagaagtacacgatgggggacgctcctgat
tatgacagaagccagtggctgaatgaaaaattcaagctgggcctggactttcccaatgta
ggccctggtctcctctttgcccttgcatatgggaaggggatgctggggagcctggtggcc
caactgagcttccccggtttcccatctatccagctgccctacttgattgatgggactcac
aagatcacccagagcaacgccatcctgcggtacattgcccgcaagcacaacctgtgcggg
gaatcagaaaaggagcagattcgcgaagacattttggagaaccagtttatggacagccgt
atgcagctggccaaactctgctatgacccagattttagtttgtgtccaaaattgattcct
tctggtgagttcttggtcttgctgactctaagaatgaagccgcggtcctacacggagaaa
ctgaaaccagaatacctgcaggcactccctgaaatgctgaagctctactcacagtttctg
gggaagcagccatggtttcttggggacaagatcacctttgtggatttcatcgcttatgat
gtccttgagagaaaccaagtatttgagcccagctgcctggatgccttcccaaacctgaag
gacttcatctcccgatttgagggcttggagaagatctctgcctacatgaagtccagccgc
ttcctcccaagacctgtgttcacaaagatggctgtctggggcaacaagtag