GENSCAN 1.0	Date run:  6-Nov-116	Time: 19:32:17

Sequence gi568815597f:10350074_10551592 : 201519 bp : 46.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2558   2726  169  0  1  107   19   206 0.506  14.60
 1.02 Intr +  10856  10970  115  2  1   91   78   149 0.999  14.65
 1.03 Intr +  11619  11752  134  2  2   94   88   124 0.800  12.44
 1.04 Intr +  13210  13271   62  1  2   76  115     4 0.920   0.28
 1.05 Intr +  15027  15226  200  1  2   86    3   154 0.514   5.77
 1.06 Intr +  15468  15575  108  2  0   83   70   196 0.589  17.78
 1.07 Intr +  18394  18465   72  0  0  105  105    69 0.995   9.90
 1.08 Intr +  21068  21189  122  1  2   77  100    34 0.982   2.79
 1.09 Intr +  24243  24392  150  0  0   79  113    98 0.995  10.68
 1.10 Intr +  24781  24973  193  1  1   85   73   156 0.959  13.29
 1.11 Intr +  25182  25300  119  2  2   87  107   164 0.962  17.46
 1.12 Term +  26472  26514   43  0  1  130   42    29 0.828  -0.87
 1.13 PlyA +  26747  26752    6                              -0.45

 2.00 Prom +  30887  30926   40                              -2.86
 2.01 Init +  48901  49052  152  0  2   69   81    95 0.761   6.53
 2.02 Intr +  49556  49631   76  2  1  114   91   190 0.995  21.42
 2.03 Intr +  50320  50499  180  0  0  102   73   203 0.987  20.26
 2.04 Intr +  52998  53063   66  2  0   77   98    79 0.987   6.90
 2.05 Intr +  54088  54206  119  0  2   76   89    46 0.753   2.76
 2.06 Intr +  57998  58037   40  2  1  123    0    59 0.695  -1.17
 2.07 Intr +  61345  61479  135  0  0  107   94   247 0.993  27.96
 2.08 Intr +  62989  63178  190  0  1   76   23   240 0.973  15.46
 2.09 Intr +  66914  67044  131  0  2   75   81   160 0.977  14.41
 2.10 Intr +  67195  67278   84  0  0   62   44    70 0.502   0.02
 2.11 Intr +  67303  67436  134  0  2   45  115   127 0.991  10.54
 2.12 Intr +  68753  68852  100  2  1   75   91   140 0.997  13.11
 2.13 Intr +  69344  69466  123  1  0   90  115    59 0.999   9.58
 2.14 Term +  69557  69676  120  1  0  117   43   115 0.999   8.37
 2.15 PlyA +  70050  70055    6                               1.05

 3.00 Prom +  73045  73084   40                              -3.16
 3.01 Init +  76278  76385  108  2  0   82   35   205 0.908  12.83
 3.02 Intr +  80430  80495   66  2  0   61   92    66 0.247   3.40
 3.03 Intr +  83769  83892  124  2  1   73   48   154 0.911  10.06
 3.04 Intr +  84584  84617   34  0  1  121   98    37 0.722   5.28
 3.05 Term +  90159  90297  139  0  1   58   41    64 0.138  -3.86
 3.06 PlyA +  91017  91022    6                               1.05

 4.00 Prom +  92162  92201   40                              -5.16
 4.01 Init + 100151 100249   99  1  0   65  105   209 0.987  18.57
 4.02 Term + 103912 103944   33  0  0   82   55    19 0.273  -4.41
 4.03 PlyA + 107830 107835    6                               1.05

 5.08 PlyA - 109872 109867    6                               1.05
 5.07 Term - 111629 111417  213  2  0   53   43   231 0.994  12.33
 5.06 Intr - 113136 112985  152  1  2  118   64   143 0.999  14.78
 5.05 Intr - 113547 113358  190  0  1   53   97   139 0.982  10.46
 5.04 Intr - 117259 117117  143  2  2   63  103   138 0.995  12.87
 5.03 Intr - 119265 119104  162  1  0   61  110   152 0.997  14.65
 5.02 Intr - 121851 121792   60  1  0   69   92    71 0.949   4.31
 5.01 Init - 122385 122205  181  0  1   69   76   203 0.905  16.55
 5.00 Prom - 122986 122947   40                              -5.66

 6.00 Prom + 123278 123317   40                              -6.36
 6.01 Init + 124894 124929   36  0  0   91  110    30 0.407   5.55
 6.02 Intr + 145201 145248   48  0  0  101  119    25 0.718   5.78
 6.03 Intr + 145616 145648   33  1  0   83  115     3 0.477   0.92
 6.04 Term + 145840 145851   12  0  0  129   41    17 0.579  -0.70
 6.05 PlyA + 146927 146932    6                               1.05

 7.05 PlyA - 147025 147020    6                               1.05
 7.04 Term - 157803 157465  339  0  0   57   37   125 0.106  -1.16
 7.03 Intr - 161029 160945   85  0  1   10   59   134 0.072   2.52
 7.02 Intr - 176841 176609  233  0  2    6  100   145 0.028   4.07
 7.01 Init - 183537 183445   93  0  0   88  103    30 0.485   4.88
 7.00 Prom - 189537 189498   40                              -3.26

 8.04 PlyA - 190242 190237    6                               1.05
 8.03 Term - 191276 191209   68  0  2  123   45    41 0.054   1.40
 8.02 Intr - 199504 199466   39  2  0  118  101     9 0.700   3.40
 8.01 Intr - 201433 201296  138  2  0    2  100   136 0.817   6.64

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  97072  96968  105  1  0   31   56   125 0.807   3.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:10350074_10551592|GENSCAN_predicted_peptide_1|495_aa
XRIRNKPEVDEAAVDAILSLNIISAKYLKSSHNSSRWDTQSSVKKSTLAGVNWYTVRTFY
RFEAVWDSSLHNSLLLNRVTPYGEKIYMTLSAYLELDHCIQPAVITKDVCMVFYSRDAKI
SPPRSLRSLFGSGYSKSPDSNRVTGIYELSLCKMSDTGSPGMQRRRRKILDTSVAYVRGE
ENLAGWRPRGDSLILEHQWELEKLELLHEVSRGRVVQMQELSDKIAKISTTTFESAITPS
ESSGYDSGDIESLVDREKELATKCLQLLTHTFNREFSQVHGSVSDCKLSDISPIGRDPSE
SSFSSATLTPSSTCPSLVDSRSNSLDQKTPEANSRASSPCPEFEQFQIVPAVETPYLARA
GKNEFLNLVPDIEEIRPSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVE
RGIINLSTAQVEYSEDQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGT
IRSKLSRRCPSQSKY

>gi568815597f:10350074_10551592|GENSCAN_predicted_CDS_1|1488_bp
ngtcgtattcggaataagcctgaggtggatgaagctgcagttgatgccatcctctcccta
aatattatttctgccaagtacctgaagtcttcccacaactctagcaggtgggacacccag
agcagtgtgaagaagtccacacttgcaggcgttaattggtacaccgttaggaccttctac
cgctttgaggctgtgtgggatagctctctgcataactcccttcttctgaaccgagtgaca
ccctatggagaaaagatctacatgaccttgtcggcctacctagagctggatcattgcatc
cagccggctgtcatcaccaaggatgtgtgcatggtcttctactcccgagatgccaagatc
tcaccaccacgctctctgcgtagcctctttggcagcggctactcaaagtcaccagattcg
aatcgagtcactggcatttacgaactcagcttatgcaaaatgtcagacacaggtagtcca
ggtatgcagagaaggagaagaaaaatcttagatacgtcagtggcatatgtgcggggagaa
gagaacttagcaggctggcggccccgtggagacagcctcatccttgagcaccagtgggag
ctggagaagctggagctcctacatgaggtatccaggggcagggttgttcagatgcaagaa
ctctcggacaagattgccaaaatctcaaccactacctttgaaagcgccatcacacctagc
gagagcagtggctatgattcaggagacatcgaaagcctggtggaccgagagaaagagctg
gctaccaagtgcctgcaacttctcacccacactttcaacagagaattcagccaggtgcac
ggcagcgtcagtgactgtaagttgtctgatatctctccaattggacgggatccctctgag
tccagtttcagcagtgccaccctcactccctcctccacctgtccctctctggtagactct
aggagcaactctctggatcagaagaccccagaagccaattcccgggcctctagtccctgc
ccagaatttgaacagtttcagattgtcccagctgtggaaacaccatatttggcccgagca
ggaaaaaacgaatttctcaatcttgttccagatattgaagaaattagaccaagctcagtg
gtctctaagaaaggataccttcatttcaaggagcctctttacagtaactgggctaaacat
tttgttgtcgtccgtcggccttatgtcttcatctataacagtgacaaagaccctgtggag
cgtggaatcattaacctgtccacagcacaggtggagtacagtgaggaccagcaggccatg
gtgaagacaccaaacacctttgctgtctgcacaaagcaccgtggggtccttttgcaggcc
ctcaatgacaaagacatgaacgactggttgtatgccttcaacccacttctagctggcaca
atacggtcaaagctttcccgcagatgcccgagccagtcgaaatactaa

>gi568815597f:10350074_10551592|GENSCAN_predicted_peptide_2|549_aa
MAPPPSIRLAGAEKPGVSGRSFWREPLRVFPSLVLRASPLFGSALSAAMAQADIALIGLA
VMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRII
LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE
EGARYGPSLMPGGNKEAWPHIKTIFQGIAAKVGDEGAGHFVKMVHNGIEYGDMQLICEAY
HLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDTDGKHLLPKIRDSAGQKG
TGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQKFQFDGDKKSFLED
IRKNIGPSGISTADENKTGRHKAVTLLMAILALYASKIISYAQGFMLLRQAATEFGWTLN
YGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFFKSAVENCQDSWRRAVSTGV
QAGIPMPCFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGG
TVSSSSYNA

>gi568815597f:10350074_10551592|GENSCAN_predicted_CDS_2|1650_bp
atggctccacccccttccattcgattggccggcgccgaaaagccgggcgtgagcggccgc
agtttctggagggagccgctgcgggtctttccctcactcgtcctccgcgcgtcgccgctc
ttcggttctgctctgtccgccgccatggcccaagctgacatcgcgctgatcggattggcc
gtcatgggccagaacttaattctgaacatgaatgaccacggctttgtggtctgtgctttt
aataggactgtctccaaagttgatgatttcttggccaatgaggcaaagggaaccaaagtg
gtgggtgcccagtccctgaaagagatggtctccaagctgaagaagccccggcggatcatc
ctcctggtgaaggctgggcaagctgtggatgatttcatcgagaaattggtaccattgttg
gatactggtgacatcatcattgacggaggaaattctgaatatagggacaccacaagacgg
tgccgagacctcaaggccaagggaattttatttgtggggagcggagtcagtggtggagag
gaaggggcccggtatggcccatcgctcatgccaggagggaacaaagaagcgtggccccac
atcaagaccatcttccaaggcattgctgcaaaagtgggagatgagggagcaggccacttc
gtgaagatggtgcacaacgggatagagtatggggacatgcagctgatctgtgaggcatac
cacctgatgaaagacgtgctgggcatggcgcaggacgagatggcccaggcctttgaggat
tggaataagacagagctagactcattcctgattgaaatcacagccaatattctcaagttc
caagacaccgatggcaaacacctgctgccaaagatcagggacagcgcggggcagaagggc
acagggaagtggaccgccatctccgccctggaatacggcgtacccgtcaccctcattgga
gaagctgtctttgctcggtgcttatcatctctgaaggatgagagaattcaagctagcaaa
aagctgaagggtccccagaagttccagtttgatggtgataagaaatcattcctggaggac
attcggaagaatattggcccttctgggatctccactgctgatgagaataagactggtaga
cataaggcggtcactctcctaatggcaatcctagcactctacgcttccaagatcatctct
tacgctcaaggctttatgctgctaaggcaggcagccaccgagtttggctggactctcaat
tatggtggcatcgccctgatgtggagagggggctgcatcattagaagtgtattcctagga
aagataaaggatgcatttgatcgaaacccggaacttcagaacctcctactggacgacttc
tttaagtcagctgttgaaaactgccaggactcctggcggcgggcagtcagcactggggtc
caggctggcattcccatgccctgttttaccactgccctctccttctatgacgggtacaga
catgagatgcttccagccagcctcatccaggctcagcgggattacttcggggctcacacc
tatgaactcttggccaaaccagggcagtttatccacaccaactggacaggccatggtggc
accgtgtcatcctcgtcatacaatgcctga

>gi568815597f:10350074_10551592|GENSCAN_predicted_peptide_3|156_aa
MRPHSPALGWSMGLGAVEQGATLIGEARATQEPTEWGRPAVMEEEAETEEQQRFSYQQRL
KAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARMGYLEIPAS
LKSDRELLCFIKTLNNTKHFGDLLLPFLQTCEKNHN

>gi568815597f:10350074_10551592|GENSCAN_predicted_CDS_3|471_bp
atgcgcccacactccccagcccttgggtggtcgatgggactgggcgccgtggagcagggg
gccacgctcatcggggaggctcgggccacacaggagcccacggagtggggtcggcccgca
gtgatggaggaggaggcggagaccgaggagcagcagcgattctcttaccaacagaggcta
aaggcagcagttcactatactgtgggttgtctttgcgaggaagttgcattggacaaagag
atgcagttcagcaaacagaccattgcggccatttcggagctgactttccgacagtgtgaa
aattttgccaaagaccttgaaatgtttgcaaggatgggctacttagagatccctgctagt
ttgaagtctgaccgtgaacttctgtgtttcatcaaaactttaaataataccaaacatttt
ggtgacttgcttctgccctttctgcagacatgcgaaaagaaccacaattaa

>gi568815597f:10350074_10551592|GENSCAN_predicted_peptide_4|43_aa
MPLSPGLLLLLLSGATATAALPLEGGPTGRDSEDLAPEQLPNC

>gi568815597f:10350074_10551592|GENSCAN_predicted_CDS_4|132_bp
atgccattgtcccccggcctcctgctgctgctgctctccggggccacggccaccgctgcc
ctgcccctggagggtggccccaccggccgagacagcgaggatttggcaccagaacagctc
cctaactgctga

>gi568815597f:10350074_10551592|GENSCAN_predicted_peptide_5|366_aa
MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSKGWLGTPGEGVGEPGP
GTYAGKRELLLTISGGPDKEPCDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSNTKF
VALASNEKWAYNNSDGGTAWISQESFDVDETDSGAGLKWKNVARQLKEDLSSIILLSEED
LQMLVDAPCSDLAQELRQSCATVQRLQHTLQQVLDQREEVRQSKQLLQLYLQALEKEGSL
LSKQEESKAAFGEEVDAVDTGISRETSSDVALASHILTALREKQAPELSLSSQDLELVTK
EDPKALAVALNWDIKKTETVQEACERELALRLQQTQSLHSLRSISASKASPPGDLQNPKR
ARQDPT

>gi568815597f:10350074_10551592|GENSCAN_predicted_CDS_5|1101_bp
atggaggtgaccggggacgccggggtaccagaatctggcgagatccggactctaaagccg
tgtctgctgcgccgcaactacagccgcgaacagcacggcgtggccgcctcctgcctcgaa
gacctgaggagcaagggttggctcgggaccccgggcgagggtgtgggggagccagggccg
ggaacctatgcaggaaagagggagctgctactgaccatttctggaggtccagacaaggaa
ccctgtgacattctggccattgataagtccctgacaccagtcaccctggtcctggcagag
gatggcaccatagtggatgatgacgattactttctgtgtctaccttccaatactaagttt
gtggcattggctagtaatgagaaatgggcatacaacaattcagatggaggtacagcttgg
atttcccaagagtcctttgatgtagatgaaacagacagcggggcagggttgaagtggaag
aatgtggccaggcagctgaaagaagatctgtccagcatcatcctcctatcagaggaggac
ctccagatgcttgttgacgctccctgctcagacctggctcaggaactacgtcagagttgt
gccaccgtccagcggctgcagcacacactccaacaggtgcttgaccaaagagaggaagtg
cgtcagtccaagcagctcctgcagctgtacctccaggctttggagaaagagggcagcctc
ttgtcaaagcaggaagagtccaaagctgcctttggtgaggaggtggatgcagtagacacg
ggtatcagcagagagacctcctcggacgttgcgctggcgagccacatccttactgcactg
agggagaagcaggctccagagctgagcttatctagtcaggatttggagttggttaccaag
gaagaccccaaagcactggctgttgccttgaactgggacataaagaagacggagactgtt
caggaggcctgtgagcgggagctcgccctgcgcctgcagcagacgcagagcttgcattct
ctccggagcatctcagcaagcaaggcctcaccacctggtgacctgcagaatcctaagcga
gccagacaggatcccacatag

>gi568815597f:10350074_10551592|GENSCAN_predicted_peptide_6|42_aa
MASSEQAEQPSQPSSTPGSENVLPREPLGASASVVFKEQGLL

>gi568815597f:10350074_10551592|GENSCAN_predicted_CDS_6|129_bp
atggcgtcctcggagcaggcagagcagccgagccagccaagctctactccaggaagtgaa
aatgtgctgcctcgagagccgctgggtgcgagcgcctcagtggtctttaaagaacagggc
ctgctgtaa

>gi568815597f:10350074_10551592|GENSCAN_predicted_peptide_7|249_aa
MECSVISNSFKKNVGDIAKNSINERIQFKHQTHQKTEESQQSRSATNGMPPSPRSCYRMS
IPNLKIQNPKCSKIQNFLSANMTVKGHAQRKCSLEHFGFGIFRFEMLNQQTSSSAACTFN
DAYRCTTATEQDVENEEVNFAALTLTMRNLWMLIETQIKDLPEGAEKVEIKDPGYCIFFT
YADSSDSLETCRHHFKSWSPEQIAQLSNLLPASKRQNNKRLLPPRSYQGHSTLLYRHHMK
RSYYLLSIP

>gi568815597f:10350074_10551592|GENSCAN_predicted_CDS_7|750_bp
atggagtgctctgtcattagtaattcatttaagaagaacgtgggggatatagcaaagaac
agcataaacgagcgaatccaatttaaacatcagacccaccagaaaacagaagaaagtcaa
caatcaagatctgctactaacgggatgccaccaagtcctagatcctgctacaggatgagc
atccctaatctgaaaatccaaaatccaaaatgctccaaaatccagaactttttgagtgcc
aacatgacagtcaaaggtcatgcacaaaggaaatgctcactggagcatttcggatttggg
attttcagatttgagatgctcaaccaacaaaccagcagctctgctgcctgcacatttaac
gatgcctatcggtgcaccacagctacggaacaggatgtggagaacgaggaggtgaacttt
gctgccttaactctgacaatgaggaatttgtggatgttgatagaaacacagataaaggat
ttacctgagggggcagagaaagtagaaataaaagatcctggatattgtattttctttact
tatgcggattccagtgactccctggagacctgcaggcaccactttaagagctggagtcca
gagcaaattgctcaattgtccaaccttctccccgccagcaagagacagaacaacaagcgg
ctgctgccccctagaagctaccaggggcatagcaccttgctatatagacatcacatgaaa
agatcctattatctcctctccatcccataa

>gi568815597f:10350074_10551592|GENSCAN_predicted_peptide_8|81_aa
XSPSRIRAAGIKLPNAPASSALCNDIHANGDELGFMEVRLLRMDLKGLPKGEPLIGKKKC
SKTKPVLSPLVALTPEKGFYR

>gi568815597f:10350074_10551592|GENSCAN_predicted_CDS_8|246_bp
naatctccaagccgaatccgtgctgctgggataaagctgcctaatgcaccagcctccagc
gcgctgtgtaatgacatccacgctaatggagatgagctcggcttcatggaggttcgactc
ctgagaatggatcttaaaggactgcctaaaggagagcctttgattgggaaaaaaaaatgt
tccaaaaccaaacccgttttgtctcccctggtagctctcactcctgagaaaggcttttac
cgctaa