GENSCAN 1.0	Date run:  8-Nov-116	Time: 17:45:24

Sequence gi568815597f:103471603_103656330 : 184728 bp : 35.61% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  14789  15404  616  1  1   71   60   174 0.037   8.44
 1.02 Intr +  34019  34080   62  0  2   61  115    44 0.133   1.93
 1.03 Intr +  48323  48519  197  1  2   63   86   111 0.153   5.69
 1.04 Intr +  54465  54660  196  0  1   75   95   156 0.961  13.50
 1.05 Intr +  56093  56140   48  1  0   68   86    46 0.548   0.36
 1.06 Intr +  65314  65448  135  0  0   32   34   115 0.427   0.34
 1.07 Intr +  65740  65882  143  0  2   30   68   225 0.477  12.93
 1.08 Intr +  69748  69873  126  1  0   84   91    31 0.559   1.87
 1.09 Intr +  71694  71845  152  0  2   34   91    79 0.414   1.69
 1.10 Intr +  73339  73500  162  2  0   32   90   116 0.803   5.23
 1.11 Intr +  74646  74740   95  1  2   35  100    21 0.339  -3.24
 1.12 Intr +  75375  75433   59  2  2   61  103    17 0.360  -2.74
 1.13 Term +  79339  79507  169  1  1  105   28   146 0.799   6.67
 1.14 PlyA +  79647  79652    6                               1.05

 2.04 PlyA -  79802  79797    6                               1.05
 2.03 Term -  98380  97884  497  2  2   55   42   301 0.536  15.94
 2.02 Intr -  98653  98395  259  1  1   76    2   249 0.303  11.21
 2.01 Init -  98978  98778  201  2  0   99    2   163 0.700   7.76
 2.00 Prom -  99213  99174   40                              -8.45

 3.00 Prom +  99954  99993   40                              -9.75
 3.01 Init + 100001 100168  168  1  0   78   94    75 0.926   5.12
 3.02 Intr + 100508 100654  147  1  0   60   98    37 0.711   1.41
 3.03 Intr + 101461 101658  198  0  0   74   99   180 0.999  16.33
 3.04 Intr + 102106 102336  231  0  0   70   73   182 0.999  11.95
 3.05 Intr + 102658 102791  134  0  2   75   33   130 0.993   4.72
 3.06 Intr + 103839 103938  100  0  1   69  111    59 0.989   5.49
 3.07 Intr + 105888 106006  119  2  2   16  100    94 0.989   1.74
 3.08 Intr + 106118 106243  126  2  0   72  119   102 0.995  10.57
 3.09 Intr + 145149 145215   67  0  1   33  109    88 0.046   3.39
 3.10 Intr + 145887 146006  120  2  0   28   94    64 0.326   0.77
 3.11 Intr + 146352 146498  147  2  0   70   98    37 0.831   2.41
 3.12 Intr + 147309 147506  198  2  0   78   91   192 0.999  17.13
 3.13 Intr + 147952 148182  231  0  0   70   73   144 0.994   8.15
 3.14 Intr + 148949 149082  134  1  2   67   33   125 0.983   3.42
 3.15 Intr + 150192 150291  100  0  1   50  111    75 0.983   5.19
 3.16 Intr + 152264 152382  119  1  2   49  100    94 0.999   5.04
 3.17 Intr + 152494 152619  126  1  0   72  119    85 0.996   8.87
 3.18 Term + 153955 154144  190  1  1   79   38    96 0.885  -0.36
 3.19 PlyA + 156926 156931    6                               1.05

 4.07 PlyA - 157518 157513    6                               1.05
 4.06 Term - 178796 178678  119  0  2  103   33   122 0.928   5.92
 4.05 Intr - 179477 179372  106  2  1   32   16   149 0.895   0.97
 4.04 Intr - 180949 180727  223  0  1   35   86   147 0.715   6.41
 4.03 Intr - 182420 182026  395  2  2    8   67   319 0.388  14.33
 4.02 Intr - 183104 182736  369  2  0   40   55   205 0.382   6.78
 4.01 Intr - 183621 183541   81  0  0   51   68    72 0.388   0.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  48350  48519  170  1  2   92   86    93 0.808   8.55
S.002 Term + 107709 107898  190  0  1   89   38    93 0.952   0.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:103471603_103656330|GENSCAN_predicted_peptide_1|719_aa
MGKDFMSKTPKAMTIKAKIDKWDLIKLKSFCTAKATTISVNRKPTEWEKIFAICSSDKGL
ISRIYNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKRHMKKCSSSLAIREIQIKTT
MRYHLTAVRMAIIKKSGNSRCWRGCGEVGTLLHSRWDCKLVQPLWKSVWRFLRDLELEIP
FDPAIPLLGVYPKDYKSCCYKDTCTRNFNMKEKMRQMNTLKAHLDKYGKRIEEAEMVLTD
NEEFNEKVICKHLKKVRELSMQISVGTASLKERMVKAKVLVMGLKCSSTARRKMAAPEQP
LAISRGCTSSSSLSPPRGDRTLLVRHLPAELTAEEKEDLLKYFGAQSVRVLSDKGRLKHT
AFATFPNEKAAIKILSKSRAEGYFVLLSHEKHLNCFDHVPSQVDEDIATQSADQEGRIYE
DYMPLHAPLPPTSPQPPEEPPLPDEDEELSSEESEYESTDDEDRQRMNKLMELANLQPKR
PKTIKQRHVRKKRKIKDMLNTPLCPSHSSLHPVLLPSDVFDQPQPVGNKRIEFHISTDMP
AAFKKDLEKEQNCEEKNHDLPATEVDASNIGFGKIFPKPNLDITEEIKEDSDEMPSECIS
RRELEKGRISREEMETLSVFRSYEPGEPNCRIYVKNLAKHVQEKDLKYIFGRYVDFSSET
QRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVVSFKSIYFKTI

>gi568815597f:103471603_103656330|GENSCAN_predicted_CDS_1|2160_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatgacaataaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagcaactaccatcagtgtg
aacaggaaacctacagaatgggagaaaatttttgcaatctgctcatctgacaaagggcta
atatccagaatctacaatgaactcaaacaaatttacaagaaaaaaactaacaaccccatc
aaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaaa
agacacatgaaaaaatgctcatcatcactggccataagagaaatacaaatcaaaaccaca
atgagataccatctcacagcagttagaatggcgatcattaaaaagtcaggaaacagcagg
tgctggagaggatgtggagaagtaggaacacttttacacagtcggtgggactgtaaacta
gttcaaccattgtggaagtcagtgtggcgattcctcagggatctagaactagaaatacca
tttgacccagccatcccattactgggtgtatacccaaaggattataaatcatgctgctat
aaagacacatgcacacgtaattttaacatgaaagaaaaaatgcgacaaatgaatacactt
aaagcacacttggacaagtatgggaagagaatagaggaggcagagatggtgttgactgac
aatgaagaatttaatgagaaagtcatatgtaagcatctgaagaaagtcagggagctaagc
atgcagatatctgtaggaacagcatccctgaaagagagaatggtaaaggcaaaggtctta
gttatgggtctgaagtgttcaagcacagccagaaggaaaatggcagctcccgagcagccg
cttgcgatatcaaggggatgcacgagctcctcctcgctttccccgcctcggggcgaccga
acccttctggtcaggcacctgccggctgagcttactgctgaggagaaagaggacttgctg
aagtacttcggggctcagtctgtgcgggtcctgtcagataaggggcgactgaaacataca
gcttttgccacattccctaatgaaaaagcagctataaagatcctttccaaaagtagagca
gagggatattttgttctactgagccacgaaaaacacctgaattgtttcgaccatgtgcct
tcccaggttgatgaagacattgctacacagtctgcagatcaggaaggaagaatttatgaa
gactatatgccattgcatgcacctcttccacccacatctcctcagccacctgaggaacct
cctttgccagacgaggatgaggaattatctagtgaagaatcagaatatgaaagcactgat
gatgaggaccgacagagaatgaacaaattaatggaactagcaaatcttcagcccaaaaga
cctaaaacaataaagcagcgccatgtgagaaaaaagagaaaaataaaggatatgttgaat
acacctttgtgtccttcacacagcagtttacatccagtgctgttaccttcagatgtattt
gaccaaccacaacctgtaggtaacaaaagaattgaattccatatatctaccgacatgcca
gctgcatttaagaaagatttagaaaaggaacaaaattgtgaggaaaaaaatcatgattta
cctgctactgaagttgatgcatccaatataggatttggaaaaatcttccccaaacctaat
ttggacatcacagaggagattaaagaagactctgatgaaatgccttcagaatgtatttct
agaagggaattggaaaagggcagaatttctagagaagaaatggaaacactttcagttttc
agaagttatgaaccgggtgaaccaaactgtagaatttatgtaaagaatttagctaaacat
gttcaagaaaaggaccttaaatatatttttggaagatatgttgacttttcatcagaaaca
cagcggatcatgtttgatatacgtttgatgaaagaaggtcgtatgaaaggacaagctttc
attggacttcctaatgaaaaagcagcagcaaaagccttaaaggaagctaatggatatgtg
ctttttggaaaacccatggtggttgtatcctttaaatccatctatttcaaaactatataa

>gi568815597f:103471603_103656330|GENSCAN_predicted_peptide_2|318_aa
MEPLIHTEYLCSGDAIILIFMVLGARVVISFCILSVMPGYMLPPDSTVLAYRSLRMSTSH
FMMELKMGGGGCGSGHLLLKVQGNIAQFLLDVVSDLPLGSGAEAIANLGKDLHEVVGQVL
ASQVQMQNGVREGVALIDGHHVGDPISKAHDNASVEGQPSLDGHVHGQGVEGIKHDLSHL
LSVGLEVQGVLGQQHQVLLQGHVQSLVEGVMPDLLYVIPVGHDTMLNGGTSGSGYCACSQ
PCSPHRSPSGPCPPSCPGAGGTDDGRKHGWGLSSPAKPALHMLEPLSITSTAISSSIATG
GGVGQWSGRTTWCMGWQR

>gi568815597f:103471603_103656330|GENSCAN_predicted_CDS_2|957_bp
atggagccgctgatccacacggagtacttgtgctctggggatgcgatcatcttgatcttc
atggtgctaggtgcccgggtggtgatctccttctgcatcctgtcggtgatgcctgggtac
atgttgccaccagatagcaccgtgttggcctacaggtctttgcggatgtccacgtcacac
ttcatgatggagttgaagatgggaggaggaggatgtggcagtggccatctactgctcaaa
gtccagggcaacatagcacagtttctccttgacgtagtgtctgatctcccgctcggcagt
ggtgctgaagctatagccaaccttggtaaggatcttcatgaggtagttggtcaggtcctg
gccagccaggtccagatgcagaatggtgtcagggagggcgtagcccttatagatgggcac
catgtgggtgaccccatctccaaagcccatgacaatgccagtgtagagggacagcctagc
ctggatggccacgtacatggccagggtgttgaaggtatcaaacatgatctgagtcatctt
ctctctgttggccttgaggttcagggggtcctcggtcagcagcaccaggtgctcctccaa
ggccatgtgcagtcccttgtagaaggtgtgatgccagatcttctctatgtcatcccagtt
ggtcatgataccatgcttaatgggggtacttcagggtcaggatactgtgcttgctctcag
ccatgtagcccacataggagtccctctggcccatgcccaccatcatgccctggtgccggg
ggcaccgatgatggaaggaaacatggctgggggttgtcgtccccagcaaagccagctttg
cacatgctggagccattgtcaatcaccagtacggcaatctcttcttccattgcgactggt
ggaggagtgggacagtggagcggcaggacaacatggtgcatgggctggcagaggtga

>gi568815597f:103471603_103656330|GENSCAN_predicted_peptide_3|884_aa
MKFFLLLFTIGFCWAQYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPP
NENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMSGN
AVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLVGL
LDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAG
SKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKLYKMAVG
FMLAHPYGFTRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEH
RWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDCLYYTWLGHFMAK
NMLVEDQSGSYSPNTQQGRTSIVHLFEWRWVDIALECERYLAPKGFGGVQVSPPNENVAI
YNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAVSAGT
SSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGSGDIENYNDATQVRDCRLTGLLDLALE
KDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNSNWFPAGSKPFIY
QEVIDLGGEPIKSSDYFGNGRVTEFKYGAKLGTVIRKWNGEKMSYLKLYKMAVGFMLAHP
YGFTRVMSSYRWPRQFQNGNDVNDWVGPPNNNGVIKEVTINPDTTCGNDWVCEHRWRQIR
NMVIFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWSFSLTLQTGLPAGTYCDV
ISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAESKL

>gi568815597f:103471603_103656330|GENSCAN_predicted_CDS_3|2655_bp
atgaagttctttctgttgcttttcaccattgggttctgctgggctcagtattccccaaat
acacaacaaggacggacatctattgttcatctgtttgaatggcgatgggttgatattgct
cttgaatgtgagcgatatttagctcccaagggatttggaggggttcaggtctctccacca
aatgaaaatgttgcaattcacaaccctttcagaccttggtgggaaagataccaaccagtt
agctataaattatgcacaagatctggaaatgaagatgaatttagaaacatggtgactaga
tgtaacaatgttggggttcgtatttatgtggatgctgtaattaatcatatgtctggtaat
gctgtgagtgcaggaacaagcagtacctgtggaagttacttcaaccctggaagtagggac
tttccagcagtcccatattctggatgggattttaatgatggtaaatgtaaaactggaagt
ggagatatcgagaactacaatgatgctactcaggtcagagattgtcgtctggttggtctt
cttgatcttgcactggagaaagattatgtgcgttccaagattgccgaatatatgaatcat
ctcattgacattggtgttgcagggttcagacttgatgcttccaagcacatgtggcctgga
gacataaaggcaattttggacaaactgcataatctaaacagtaactggttccctgcagga
agtaaacctttcatttaccaggaggtaattgatctgggtggtgagccaattaaaagcagt
gactactttggaaatggccgggtgacagaattcaagtatggtgcaaaactcggcacagtt
attcgcaagtggaatggagagaagatgtcttacctaaagctgtataaaatggcagttgga
tttatgcttgctcatccttatggttttacacgagtaatgtcaagctaccgttggccaaga
cagtttcaaaatggaaacgatgttaatgattgggttgggccaccaaataataatggagta
attaaagaagttactattaatccagacactacttgtggcaatgactgggtctgtgaacat
cgatggcgccaaataaggaacatggttaatttccgcaatgtagtggatggccagcctttt
acaaactggtatgataatgggagcaaccaagtggcttttgggagaggaaacagaggattc
attgttttcaacaatgatgactgtctttactacacgtggcttggtcacttcatggctaaa
aacatgcttgtggaagaccagtctggctcgtattccccaaatacacaacaaggacggaca
tctattgttcatctgtttgaatggcgatgggttgatattgctcttgaatgtgagcgatat
ttagctccgaagggatttggaggggttcaggtctctccaccaaatgaaaatgttgcaatt
tacaaccctttcagaccttggtgggaaagataccaaccagttagctataaattatgcaca
agatctggaaatgaagatgaatttagaaacatggtgactagatgtaacaatgttggggtt
cgtatttatgtggatgctgtaattaatcatatgtgtggtaacgctgtgagtgcaggaaca
agcagtacctgtggaagttacttcaaccctggaagtagggactttccagcagtcccatat
tctggatgggatttcaatgatggtaaatgtaaaactggaagtggagatatcgagaactac
aatgatgctactcaggtcagagattgtcgtctgactggtcttcttgatcttgcactggag
aaggattacgtgcgttctaagattgccgaatatatgaaccatctcattgacattggtgtt
gcagggttcagacttgatgcttccaagcacatgtggcctggagacataaaggcaattttg
gacaaactgcataatctaaacagtaactggttccctgcaggaagtaaacctttcatttac
caggaggtaattgatctgggtggtgagccaattaaaagcagtgactactttggtaatggc
cgggtgacagaattcaagtatggtgcaaaactcggcacagttattcgcaagtggaatgga
gagaagatgtcttacttaaagctgtacaaaatggcagttggatttatgcttgctcatcct
tacggatttacacgagtaatgtcaagctaccgttggccaagacagtttcaaaatggaaac
gatgttaatgattgggttgggccaccaaataataatggagtaattaaagaagttactatt
aatccagacactacttgtggcaatgactgggtctgtgaacatcgatggcgccaaataagg
aacatggttattttccgcaatgtagtggatggccagccttttacaaattggtatgataat
gggagcaaccaagtggcttttgggagaggaaacagaggattcattgttttcaacaatgat
gactggtcattttctttaactttgcaaactggtcttcctgctggcacatactgtgatgtc
atttctggagataaaattaatggcaattgcacaggcattaaaatttacgtttctgatgat
ggcaaagctcatttttctattagtaactctgctgaagatccatttattgcaattcatgct
gaatctaaattgtaa

>gi568815597f:103471603_103656330|GENSCAN_predicted_peptide_4|430_aa
CCVPLKGTEIVHLGSSDFETVAIRCSQRFLVTASFRSSTVVKGQAAAVVVAKGHLFQESS
RSTGQEKPAPKVLFDPELEDSRQEMAPTVPSTPYPVGRPPSPEPTAPRPPRVDKNKSETA
GKSTSLAARLTAQDGNSNALREQRYTRTDEDPNEGPDMERLRGYREALIERLKKGAQKGT
NVNKVSEVIQGKEESPAQFYQRPCEAYCMYTPFDLESPENQPLINTALVIQSAEDIQRKL
QKQARFAGMKTLQLLERANEVFVNRDATSGQESRKEGERQARFKKSPTIFGEASVGDLQM
FPAKDLGCILLQYVDDLLLGHSMAVRCAKRTGALLRHLEDCGYKVPKKKAQICRQQHNAK
QGPSVPRGIEASGAAHFEDLQVDFTEMPKCRSDIVWIKDWNVAPLWPQWKGPQTINLTTP
TAVNVEGIPA

>gi568815597f:103471603_103656330|GENSCAN_predicted_CDS_4|1293_bp
tgttgtgtgcccttaaaagggacagaaattgtgcacttggggagctcggattttgagaca
gtagctatccgatgctcccagagattcctagttacagctagttttagatcctctacagtg
gtaaaaggacaggcagcagcagtagtagtagcaaagggacatttatttcaggaaagttct
cgctccaccggccaagagaagccagcacctaaagttctgtttgacccagagctcgaggac
tcaaggcaggagatggcaccaacagtgccctcaaccccttatccagtggggaggccccct
tctcctgagcccacagcccctagaccacccagagtagacaagaacaaaagtgaaactgcg
ggaaaatccacttccctggcagcccgcttaacggcccaagacgggaattcaaatgccctg
agagagcagcgatatactaggacagatgaggatccaaatgaaggaccagatatggaaagg
ctaagagggtaccgagaggcattaattgaaaggttgaaaaaaggggctcaaaagggtacc
aatgtaaataaagtttctgaagtcatccaaggaaaggaggaaagcccagcccagttctat
caaagaccgtgtgaggcctattgcatgtacactcctttcgatctggagagtcctgaaaat
cagccgttgattaatacggccttagttattcagagtgcagaagatatccagagaaaattg
caaaaacaggctaggtttgcaggaatgaaaaccttgcagttactggaaagagctaatgaa
gtatttgtaaatagagatgcaacaagcggccaagaaagccgtaaggagggcgaacgccag
gccaggttcaaaaagtcccccaccatctttggggaggcctcggttggagacctccaaatg
tttcctgctaaagacctaggttgcatcctgctccagtatgtagatgaccttctgctagga
cactccatggcagtcaggtgtgcaaaaaggacgggtgccctgcttcgacacctggaggac
tgtggatataaagtgcccaaaaagaaagctcagatctgcagacagcagcacaatgcgaag
caaggcccctctgtacctcggggaatagaagcctctggagcagctcattttgaagatctt
caagtggacttcacagaaatgcctaaatgtagaagtgacattgtgtggatcaaggactgg
aacgtggctccgctgtggccacagtggaaaggaccccagacaattaacctgaccactccc
acagctgtcaatgtagaaggaatcccagcctag