GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:53:36

Sequence gi568815597f:10330518_10542402 : 211885 bp : 46.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4003   4121  119  1  2  101   96   187 0.997  20.91
 1.02 Intr +   6140   6225   86  0  2   83   94    80 0.999   7.64
 1.03 Intr +   6557   6686  130  1  1   82   71    77 0.993   5.67
 1.04 Intr +   6854   7016  163  0  1   62   82   113 0.976   7.13
 1.05 Intr +   9252   9342   91  0  1   22  101    67 0.639   1.40
 1.06 Intr +  11533  11651  119  0  2   66   36    78 0.593  -0.34
 1.07 Intr +  12715  12770   56  1  2  105   99     5 0.932   1.92
 1.08 Intr +  13573  13757  185  2  2   88   42   175 0.644  12.41
 1.09 Intr +  18132  18216   85  2  1   74   95    77 0.976   6.39
 1.10 Intr +  22114  22282  169  2  1  107   19   206 0.506  14.60
 1.11 Intr +  30412  30526  115  1  1   91   78   149 0.999  14.65
 1.12 Intr +  31175  31308  134  1  2   94   88   124 0.800  12.44
 1.13 Intr +  32766  32827   62  0  2   76  115     4 0.920   0.28
 1.14 Intr +  34583  34782  200  0  2   86    3   154 0.514   5.77
 1.15 Intr +  35024  35131  108  1  0   83   70   196 0.589  17.78
 1.16 Intr +  37950  38021   72  2  0  105  105    69 0.995   9.90
 1.17 Intr +  40624  40745  122  0  2   77  100    34 0.982   2.79
 1.18 Intr +  43799  43948  150  2  0   79  113    98 0.995  10.68
 1.19 Intr +  44337  44529  193  0  1   85   73   156 0.959  13.29
 1.20 Intr +  44738  44856  119  1  2   87  107   164 0.962  17.46
 1.21 Term +  46028  46070   43  2  1  130   42    29 0.828  -0.87
 1.22 PlyA +  46303  46308    6                              -0.45

 2.00 Prom +  50443  50482   40                              -2.86
 2.01 Init +  68457  68608  152  2  2   69   81    95 0.761   6.53
 2.02 Intr +  69112  69187   76  1  1  114   91   190 0.995  21.42
 2.03 Intr +  69876  70055  180  2  0  102   73   203 0.987  20.26
 2.04 Intr +  72554  72619   66  1  0   77   98    79 0.987   6.90
 2.05 Intr +  73644  73762  119  2  2   76   89    46 0.754   2.76
 2.06 Intr +  77554  77593   40  1  1  123    0    59 0.695  -1.17
 2.07 Intr +  80901  81035  135  2  0  107   94   247 0.993  27.96
 2.08 Intr +  82545  82734  190  2  1   76   23   240 0.973  15.46
 2.09 Intr +  86470  86600  131  2  2   75   81   160 0.977  14.41
 2.10 Intr +  86751  86834   84  2  0   62   44    70 0.502   0.02
 2.11 Intr +  86859  86992  134  2  2   45  115   127 0.991  10.54
 2.12 Intr +  88309  88408  100  1  1   75   91   140 0.997  13.11
 2.13 Intr +  88900  89022  123  0  0   90  115    59 0.999   9.58
 2.14 Term +  89113  89232  120  0  0  117   43   115 0.999   8.37
 2.15 PlyA +  89606  89611    6                               1.05

 3.00 Prom +  92601  92640   40                              -3.16
 3.01 Init +  95834  95941  108  1  0   82   35   205 0.908  12.83
 3.02 Intr +  99986 100051   66  1  0   61   92    66 0.247   3.40
 3.03 Intr + 103325 103448  124  1  1   73   48   154 0.911  10.06
 3.04 Intr + 104140 104173   34  2  1  121   98    37 0.722   5.28
 3.05 Term + 109715 109853  139  2  1   58   41    64 0.138  -3.86
 3.06 PlyA + 110573 110578    6                               1.05

 4.00 Prom + 111718 111757   40                              -5.16
 4.01 Init + 119707 119805   99  0  0   65  105   209 0.987  18.57
 4.02 Term + 123468 123500   33  2  0   82   55    19 0.273  -4.41
 4.03 PlyA + 127386 127391    6                               1.05

 5.08 PlyA - 129428 129423    6                               1.05
 5.07 Term - 131185 130973  213  1  0   53   43   231 0.994  12.33
 5.06 Intr - 132692 132541  152  0  2  118   64   143 0.999  14.78
 5.05 Intr - 133103 132914  190  2  1   53   97   139 0.982  10.46
 5.04 Intr - 136815 136673  143  1  2   63  103   138 0.995  12.87
 5.03 Intr - 138821 138660  162  0  0   61  110   152 0.997  14.65
 5.02 Intr - 141407 141348   60  0  0   69   92    71 0.949   4.31
 5.01 Init - 141941 141761  181  2  1   69   76   203 0.905  16.55
 5.00 Prom - 142542 142503   40                              -5.66

 6.00 Prom + 142834 142873   40                              -6.36
 6.01 Init + 144450 144485   36  2  0   91  110    30 0.407   5.55
 6.02 Intr + 164757 164804   48  2  0  101  119    25 0.718   5.78
 6.03 Intr + 165172 165204   33  0  0   83  115     3 0.477   0.92
 6.04 Intr + 202710 202808   99  2  0   48   42    83 0.001   0.01
 6.05 Intr + 205696 205780   85  0  1   88   87    45 0.043   3.79
 6.06 Intr + 209602 209723  122  2  2   58   88    55 0.100   2.71
 6.07 Term + 210943 211071  129  0  0  112   53    80 0.074   5.08
 6.08 PlyA + 211564 211569    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 116628 116524  105  0  0   31   56   125 0.807   3.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:10330518_10542402|GENSCAN_predicted_peptide_1|840_aa
XAFVYLSNLLYPVPLIHRVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKI
SFDNEYFNQSDFSSVAMTRSGLSLEELRIVEGQGQSSEVITPPEEISRINDLDLKSSTLL
DGKMVMEGFSEEIGNHLKLGSAFTFRVTVLQASGILPEYADIFCQFNFLHRHDEAFSTEP
LKNNGRGSPLAFYHVQNIAVEITESFVDYIKTKPIVFEVFGHYQQHPLHLQGQELNSPPQ
PCRRFFPPPMPLSKPDHERKIELIRFLVSGYVNVHMLDTFSEHASVLASSAIATFQDEAD
PLPPFLFLPVPSCQSERGIQRRITVTIIHEKGSELHWKDVRELVVGRIRNKPEVDEAAVD
AILSLNIISAKYLKSSHNSSRWDTQSSVKKSTLAGVNWYTVRTFYRFEAVWDSSLHNSLL
LNRVTPYGEKIYMTLSAYLELDHCIQPAVITKDVCMVFYSRDAKISPPRSLRSLFGSGYS
KSPDSNRVTGIYELSLCKMSDTGSPGMQRRRRKILDTSVAYVRGEENLAGWRPRGDSLIL
EHQWELEKLELLHEVSRGRVVQMQELSDKIAKISTTTFESAITPSESSGYDSGDIESLVD
REKELATKCLQLLTHTFNREFSQVHGSVSDCKLSDISPIGRDPSESSFSSATLTPSSTCP
SLVDSRSNSLDQKTPEANSRASSPCPEFEQFQIVPAVETPYLARAGKNEFLNLVPDIEEI
RPSSVVSKKGYLHFKEPLYSNWAKHFVVVRRPYVFIYNSDKDPVERGIINLSTAQVEYSE
DQQAMVKTPNTFAVCTKHRGVLLQALNDKDMNDWLYAFNPLLAGTIRSKLSRRCPSQSKY

>gi568815597f:10330518_10542402|GENSCAN_predicted_CDS_1|2523_bp
nnggcatttgtttacctgagcaatctgctgtatcccgtgcccctgatccacagggtggcc
atcgtcagtgagaaaggtgaagtgcggggatttctgcgtgtggctgtacaggccatcgca
gcggatgaagaagctcctgattatggctctggaattcgacagtcaggaacagctaaaata
tcttttgataatgaatactttaatcagagtgacttttcgtctgttgcaatgactcgttct
ggtctgtccttggaggagttgaggattgtggaaggacagggtcagagttctgaggtcatc
actcctccagaagaaatcagtcgaattaatgacttggatttgaagtcaagcactttgctg
gatggtaagatggtaatggaagggttttctgaagagattggcaaccacctgaaactgggc
agtgccttcactttccgagtaacagtgttgcaggccagtggaatcctcccagagtatgca
gatatcttctgtcagttcaactttttgcatcgccatgatgaagcattctccacggagccc
ctcaaaaacaatggcagaggaagtcccctggccttttatcatgtgcagaatattgcagtg
gagatcactgaatcatttgtggattacatcaaaaccaagcctattgtatttgaagtcttt
gggcattatcagcagcacccacttcatctgcaaggacaggagcttaacagtccgcctcag
ccgtgccgccgattcttccctccacccatgccactgtccaagccagaccatgagagaaag
attgagctgattcggtttctcgtgtctggctatgtgaatgtgcatatgttggacacattt
tctgagcacgccagtgtgcttgcatcctccgctattgccaccttccaggatgaggctgac
ccattgccgccttttctctttctgccagttcccagctgccagagcgagaggggcatccag
cgaaggatcacagtgaccattatccatgagaaggggagcgagctccattggaaagatgtt
cgtgaactggtggtaggtcgtattcggaataagcctgaggtggatgaagctgcagttgat
gccatcctctccctaaatattatttctgccaagtacctgaagtcttcccacaactctagc
aggtgggacacccagagcagtgtgaagaagtccacacttgcaggcgttaattggtacacc
gttaggaccttctaccgctttgaggctgtgtgggatagctctctgcataactcccttctt
ctgaaccgagtgacaccctatggagaaaagatctacatgaccttgtcggcctacctagag
ctggatcattgcatccagccggctgtcatcaccaaggatgtgtgcatggtcttctactcc
cgagatgccaagatctcaccaccacgctctctgcgtagcctctttggcagcggctactca
aagtcaccagattcgaatcgagtcactggcatttacgaactcagcttatgcaaaatgtca
gacacaggtagtccaggtatgcagagaaggagaagaaaaatcttagatacgtcagtggca
tatgtgcggggagaagagaacttagcaggctggcggccccgtggagacagcctcatcctt
gagcaccagtgggagctggagaagctggagctcctacatgaggtatccaggggcagggtt
gttcagatgcaagaactctcggacaagattgccaaaatctcaaccactacctttgaaagc
gccatcacacctagcgagagcagtggctatgattcaggagacatcgaaagcctggtggac
cgagagaaagagctggctaccaagtgcctgcaacttctcacccacactttcaacagagaa
ttcagccaggtgcacggcagcgtcagtgactgtaagttgtctgatatctctccaattgga
cgggatccctctgagtccagtttcagcagtgccaccctcactccctcctccacctgtccc
tctctggtagactctaggagcaactctctggatcagaagaccccagaagccaattcccgg
gcctctagtccctgcccagaatttgaacagtttcagattgtcccagctgtggaaacacca
tatttggcccgagcaggaaaaaacgaatttctcaatcttgttccagatattgaagaaatt
agaccaagctcagtggtctctaagaaaggataccttcatttcaaggagcctctttacagt
aactgggctaaacattttgttgtcgtccgtcggccttatgtcttcatctataacagtgac
aaagaccctgtggagcgtggaatcattaacctgtccacagcacaggtggagtacagtgag
gaccagcaggccatggtgaagacaccaaacacctttgctgtctgcacaaagcaccgtggg
gtccttttgcaggccctcaatgacaaagacatgaacgactggttgtatgccttcaaccca
cttctagctggcacaatacggtcaaagctttcccgcagatgcccgagccagtcgaaatac
taa

>gi568815597f:10330518_10542402|GENSCAN_predicted_peptide_2|549_aa
MAPPPSIRLAGAEKPGVSGRSFWREPLRVFPSLVLRASPLFGSALSAAMAQADIALIGLA
VMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRII
LLVKAGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE
EGARYGPSLMPGGNKEAWPHIKTIFQGIAAKVGDEGAGHFVKMVHNGIEYGDMQLICEAY
HLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDTDGKHLLPKIRDSAGQKG
TGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQKFQFDGDKKSFLED
IRKNIGPSGISTADENKTGRHKAVTLLMAILALYASKIISYAQGFMLLRQAATEFGWTLN
YGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFFKSAVENCQDSWRRAVSTGV
QAGIPMPCFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQFIHTNWTGHGG
TVSSSSYNA

>gi568815597f:10330518_10542402|GENSCAN_predicted_CDS_2|1650_bp
atggctccacccccttccattcgattggccggcgccgaaaagccgggcgtgagcggccgc
agtttctggagggagccgctgcgggtctttccctcactcgtcctccgcgcgtcgccgctc
ttcggttctgctctgtccgccgccatggcccaagctgacatcgcgctgatcggattggcc
gtcatgggccagaacttaattctgaacatgaatgaccacggctttgtggtctgtgctttt
aataggactgtctccaaagttgatgatttcttggccaatgaggcaaagggaaccaaagtg
gtgggtgcccagtccctgaaagagatggtctccaagctgaagaagccccggcggatcatc
ctcctggtgaaggctgggcaagctgtggatgatttcatcgagaaattggtaccattgttg
gatactggtgacatcatcattgacggaggaaattctgaatatagggacaccacaagacgg
tgccgagacctcaaggccaagggaattttatttgtggggagcggagtcagtggtggagag
gaaggggcccggtatggcccatcgctcatgccaggagggaacaaagaagcgtggccccac
atcaagaccatcttccaaggcattgctgcaaaagtgggagatgagggagcaggccacttc
gtgaagatggtgcacaacgggatagagtatggggacatgcagctgatctgtgaggcatac
cacctgatgaaagacgtgctgggcatggcgcaggacgagatggcccaggcctttgaggat
tggaataagacagagctagactcattcctgattgaaatcacagccaatattctcaagttc
caagacaccgatggcaaacacctgctgccaaagatcagggacagcgcggggcagaagggc
acagggaagtggaccgccatctccgccctggaatacggcgtacccgtcaccctcattgga
gaagctgtctttgctcggtgcttatcatctctgaaggatgagagaattcaagctagcaaa
aagctgaagggtccccagaagttccagtttgatggtgataagaaatcattcctggaggac
attcggaagaatattggcccttctgggatctccactgctgatgagaataagactggtaga
cataaggcggtcactctcctaatggcaatcctagcactctacgcttccaagatcatctct
tacgctcaaggctttatgctgctaaggcaggcagccaccgagtttggctggactctcaat
tatggtggcatcgccctgatgtggagagggggctgcatcattagaagtgtattcctagga
aagataaaggatgcatttgatcgaaacccggaacttcagaacctcctactggacgacttc
tttaagtcagctgttgaaaactgccaggactcctggcggcgggcagtcagcactggggtc
caggctggcattcccatgccctgttttaccactgccctctccttctatgacgggtacaga
catgagatgcttccagccagcctcatccaggctcagcgggattacttcggggctcacacc
tatgaactcttggccaaaccagggcagtttatccacaccaactggacaggccatggtggc
accgtgtcatcctcgtcatacaatgcctga

>gi568815597f:10330518_10542402|GENSCAN_predicted_peptide_3|156_aa
MRPHSPALGWSMGLGAVEQGATLIGEARATQEPTEWGRPAVMEEEAETEEQQRFSYQQRL
KAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCENFAKDLEMFARMGYLEIPAS
LKSDRELLCFIKTLNNTKHFGDLLLPFLQTCEKNHN

>gi568815597f:10330518_10542402|GENSCAN_predicted_CDS_3|471_bp
atgcgcccacactccccagcccttgggtggtcgatgggactgggcgccgtggagcagggg
gccacgctcatcggggaggctcgggccacacaggagcccacggagtggggtcggcccgca
gtgatggaggaggaggcggagaccgaggagcagcagcgattctcttaccaacagaggcta
aaggcagcagttcactatactgtgggttgtctttgcgaggaagttgcattggacaaagag
atgcagttcagcaaacagaccattgcggccatttcggagctgactttccgacagtgtgaa
aattttgccaaagaccttgaaatgtttgcaaggatgggctacttagagatccctgctagt
ttgaagtctgaccgtgaacttctgtgtttcatcaaaactttaaataataccaaacatttt
ggtgacttgcttctgccctttctgcagacatgcgaaaagaaccacaattaa

>gi568815597f:10330518_10542402|GENSCAN_predicted_peptide_4|43_aa
MPLSPGLLLLLLSGATATAALPLEGGPTGRDSEDLAPEQLPNC

>gi568815597f:10330518_10542402|GENSCAN_predicted_CDS_4|132_bp
atgccattgtcccccggcctcctgctgctgctgctctccggggccacggccaccgctgcc
ctgcccctggagggtggccccaccggccgagacagcgaggatttggcaccagaacagctc
cctaactgctga

>gi568815597f:10330518_10542402|GENSCAN_predicted_peptide_5|366_aa
MEVTGDAGVPESGEIRTLKPCLLRRNYSREQHGVAASCLEDLRSKGWLGTPGEGVGEPGP
GTYAGKRELLLTISGGPDKEPCDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCLPSNTKF
VALASNEKWAYNNSDGGTAWISQESFDVDETDSGAGLKWKNVARQLKEDLSSIILLSEED
LQMLVDAPCSDLAQELRQSCATVQRLQHTLQQVLDQREEVRQSKQLLQLYLQALEKEGSL
LSKQEESKAAFGEEVDAVDTGISRETSSDVALASHILTALREKQAPELSLSSQDLELVTK
EDPKALAVALNWDIKKTETVQEACERELALRLQQTQSLHSLRSISASKASPPGDLQNPKR
ARQDPT

>gi568815597f:10330518_10542402|GENSCAN_predicted_CDS_5|1101_bp
atggaggtgaccggggacgccggggtaccagaatctggcgagatccggactctaaagccg
tgtctgctgcgccgcaactacagccgcgaacagcacggcgtggccgcctcctgcctcgaa
gacctgaggagcaagggttggctcgggaccccgggcgagggtgtgggggagccagggccg
ggaacctatgcaggaaagagggagctgctactgaccatttctggaggtccagacaaggaa
ccctgtgacattctggccattgataagtccctgacaccagtcaccctggtcctggcagag
gatggcaccatagtggatgatgacgattactttctgtgtctaccttccaatactaagttt
gtggcattggctagtaatgagaaatgggcatacaacaattcagatggaggtacagcttgg
atttcccaagagtcctttgatgtagatgaaacagacagcggggcagggttgaagtggaag
aatgtggccaggcagctgaaagaagatctgtccagcatcatcctcctatcagaggaggac
ctccagatgcttgttgacgctccctgctcagacctggctcaggaactacgtcagagttgt
gccaccgtccagcggctgcagcacacactccaacaggtgcttgaccaaagagaggaagtg
cgtcagtccaagcagctcctgcagctgtacctccaggctttggagaaagagggcagcctc
ttgtcaaagcaggaagagtccaaagctgcctttggtgaggaggtggatgcagtagacacg
ggtatcagcagagagacctcctcggacgttgcgctggcgagccacatccttactgcactg
agggagaagcaggctccagagctgagcttatctagtcaggatttggagttggttaccaag
gaagaccccaaagcactggctgttgccttgaactgggacataaagaagacggagactgtt
caggaggcctgtgagcgggagctcgccctgcgcctgcagcagacgcagagcttgcattct
ctccggagcatctcagcaagcaaggcctcaccacctggtgacctgcagaatcctaagcga
gccagacaggatcccacatag

>gi568815597f:10330518_10542402|GENSCAN_predicted_peptide_6|183_aa
MASSEQAEQPSQPSSTPGSENVLPREPLGASASVVFKEQCSDVDAVKYVICLSPAFSDKD
QEEHKQAPNILYIATAVKFLQNSRVRQSPLATRRAFLKKKGETRSYPSTVPGSRNPGSKT
ASLLEMNLKKPGGPNLGSGLEPCPSVGPVQSLWGRGRALQVSEELLVRSRQGCVAAALVP
EDD

>gi568815597f:10330518_10542402|GENSCAN_predicted_CDS_6|552_bp
atggcgtcctcggagcaggcagagcagccgagccagccaagctctactccaggaagtgaa
aatgtgctgcctcgagagccgctgggtgcgagcgcctcagtggtctttaaagaacagtgt
agtgatgtcgatgctgttaaatatgtgatttgcctgtcgcctgcattttcagacaaagat
caagaggaacataaacaagccccaaatatactttatattgccacggcagtgaagtttcta
cagaattcccgggtccgccagagcccacttgcaaccaggagagcattcctaaagaagaaa
ggtgaaactagatcttatccttctactgttcctggaagtagaaaccccggtagcaaaacc
gcctccttgctggaaatgaacttgaagaaacctggcggtcccaaccttggtagtgggcta
gagccctgccctagtgtgggtccagtgcagagcctctgggggcggggccgtgccctgcag
gtgagcgaggagctgctcgtgcggagcaggcagggctgtgtggcagccgcgcttgttcct
gaggatgattga