GENSCAN 1.0	Date run:  5-Nov-116	Time: 23:32:47

Sequence gi568815596r:86503846_86722866 : 219021 bp : 40.08% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    438    433    6                               1.05
 1.06 Term -   2104   1959  146  2  2  113   50   239 0.999  19.69
 1.05 Intr -   3748   3634  115  1  1   59   80   178 0.967  13.20
 1.04 Intr -   6634   6513  122  2  2   73   57   172 0.678  11.89
 1.03 Intr -  25552  25373  180  2  0   64   99   191 0.910  16.72
 1.02 Intr -  41487  41137  351  1  0    8   78   222 0.250   7.57
 1.01 Init -  53062  52996   67  1  1   72   68    97 0.572   7.39
 1.00 Prom -  86798  86759   40                              -1.75

 2.06 PlyA -  86915  86910    6                               1.05
 2.05 Term - 100803  99998  806  1  2   38   41   332 0.356  15.89
 2.04 Intr - 101573 101368  206  1  2   97   -8   155 0.330   4.72
 2.03 Intr - 108429 108314  116  0  2   47  111    65 0.693   3.03
 2.02 Intr - 116624 116485  140  0  2  112   80   127 0.652  13.56
 2.01 Init - 119041 118615  427  1  1   70  -27   449 0.762  26.11
 2.00 Prom - 132203 132164   40                              -4.45

 3.03 PlyA - 132540 132535    6                               1.05
 3.02 Term - 142841 142733  109  1  1   -4   52   127 0.005  -3.10
 3.01 Init - 155144 152053 3092  2  2   44   53  1108 0.581  94.37
 3.00 Prom - 155402 155363   40                              -5.25

 4.02 PlyA - 155484 155479    6                              -4.04
 4.01 Sngl - 156518 155502 1017  2  0   88   43   739 0.998  66.17
 4.00 Prom - 159821 159782   40                              -8.65

 5.00 Prom + 162309 162348   40                              -6.15
 5.01 Sngl + 162780 163475  696  2  0   47   41   360 0.311  23.15
 5.02 PlyA + 163601 163606    6                               1.05

 6.00 Prom + 165521 165560   40                              -3.65
 6.01 Init + 189356 189496  141  1  0   57   76   166 0.813  12.48
 6.02 Intr + 200278 200381  104  0  2   65   36    70 0.001  -2.45
 6.03 Intr + 209067 209229  163  0  1   61  116    63 0.004   5.46
 6.04 Intr + 214554 214692  139  2  1   15   23   138 0.016  -0.88
 6.05 Intr + 216710 216964  255  0  0   23   66   338 0.948  21.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  59001  59300  300  2  0   38   43   263 0.905  11.04
S.002 Term - 202174 202002  173  2  2  102   28   134 0.836   5.81
S.003 Init + 215290 215470  181  0  1   49   55   144 0.922   6.61


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:86503846_86722866|GENSCAN_predicted_peptide_1|326_aa
MVFRVRPADPGQTTDERIHSDTGEERLCPAALRPGGEERLCPAALRPGGEERLCPAALRP
GGEERLCPAALRPGGEERLCPAALRPGGEERLCPAALRPGGEERLCPAALRPGGEERLCP
AALRPGGEERLCPAALRLGDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSRKAVSK
LYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELSKEMMK
AGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEPEPPGA
MAASEDEEEEEEALEAMQSRLATLRS

>gi568815596r:86503846_86722866|GENSCAN_predicted_CDS_1|981_bp
atggtgttccgggtccgacccgcagatcctggccaaacgacggatgaaagaatacactca
gacacaggtgaggagcgcctctgcccggccgcccttcgtccgggaggtgaggagcgcctc
tgcccggccgcccttcgtccgggaggtgaggagcgcctctgcccggccgcccttcgtccg
ggaggtgaggagcgcctctgcccggccgcccttcgtccgggaggtgaggagcgcctctgc
ccggccgcccttcgtccgggaggtgaggagcgcctctgcccggccgcccttcgtccggga
ggtgaggagcgcctctgcccggccgcccttcgtccgggaggtgaggagcgcctctgcccg
gccgcccttcgtccgggaggtgaggagcgcctctgcccggccgcccttcgtctgggagat
atccaaagagaagaagaaaaagtgaaacgatctgtgaaagatgctgccaagaagggccag
aaggatgtctgcatagttctggccaaggagatgatcaggtcaaggaaggctgtgagcaag
ctgtatgcatccaaagcacacatgaactcagtgctcatggggatgaagaaccagctcgcg
gtcttgcgagtggctggttccctgcagaagagcacagaagtgatgaaggccatgcaaagt
cttgtgaagattccagagattcaggccaccatgagggagttgtccaaagaaatgatgaag
gctgggatcatagaggagatgttagaggacacttttgaaagcatggacgatcaggaagaa
atggaggaagaagcagaaatggaaattgacagaattctctttgaaattacagcaggggcc
ttgggcaaagcacccagtaaagtgactgatgcccttccagagccagaacctccaggagcg
atggctgcctcagaggatgaggaggaggaggaagaggctctggaggccatgcagtcccgg
ctggccacactccgcagctag

>gi568815596r:86503846_86722866|GENSCAN_predicted_peptide_2|564_aa
MWLKLFFLLLYFLVLFVLARFFEAIVWYETGIFATQLVDPVALSFKKLKTILECRGLGYS
GLPEKKDVRELVEKSGEYRASPRVPSTWERGRPVPPGTWLFPQSEAFPGSVKAAQVSSSK
LPTIKYADPSFEEESEIIWRSVGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVED
TKDGIWLVQVIANDRSPLVGKIHWEKMVKKVSRFGIRTGTFNCSSDPRYCRRRGWVRSTL
IMSVPQTSTSKGKVMLKEYSGRKIEVEHIFKWITAHAASRIKTIYNAEHLKEEWNKTLFL
STYLGHGLLIDYFEKKRRRNNNNDEVNANNLEWLSSLWDWYTSYLFHPIASFQNFPVESD
WDEDPDLFLERLAFPDLWLHPLIPTDYIKNLPMWRFKCLGVQSEEEMSEGSQDTENDSES
ENTDTLSSEKEVFEDKQSVLHNSPGTASHCDAEACSCANKYCQTSPCERKGRSYGSYNTN
EDMEPDWLTWPADMLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPV
CRWPSYKKKQPYAQHQPLSNDVPS

>gi568815596r:86503846_86722866|GENSCAN_predicted_CDS_2|1695_bp
atgtggctgaagctttttttcttgctcctctatttcctggtcctgttcgtcctggccagg
ttttttgaggccattgtgtggtatgaaactggcatctttgccacccagctggtggatccg
gtggcgctgagcttcaagaagctgaagaccattttggagtgccgggggttgggctactca
gggttgcccgagaagaaggatgtccgggagctggtggaaaagtcaggcgagtatcgggct
tcccctagggtcccctccacctgggagaggggacgacctgtacctcctggtacctggctg
ttcccccagagtgaggcctttcctggaagcgttaaagctgcccaggtttcttcgtccaag
cttcctacaatcaagtatgcggatcccagctttgaggaggagtctgaaattatttggagg
agtgttggtgacttgatggagggtgagctctattctgctctcaaggaagaagaagcatcc
gaatcggtttctagtaccaatttcagtggtgaaatgcacttctatgagcttgtggaagac
acaaaagatggcatctggctggttcaggtcatagcaaatgacagaagtcccttggtgggc
aaaattcactgggagaaaatggttaaaaaggtgtcaagatttggaatacgtacaggcaca
tttaactgttccagtgatcccagatattgcaggagaagaggctgggtccgatccacactc
attatgtctgttccacaaacaagtacttcaaaagggaaagtcatgcttaaagaatacagt
ggacgcaagattgaagtagagcacatttttaaatggataactgctcatgcagcttctcgg
atcaaaaccatttataatgctgaacacttgaaagaagaatggaataaaaccctgtttctc
agtacataccttggtcatggtttactaattgattactttgagaagaagagaaggcgcaac
aacaacaatgatgaagtcaatgccaataacttagaatggttatcaagtctgtgggactgg
tacaccagctacctcttccacccgattgcttcttttcagaactttcctgtagaatctgat
tgggacgaagaccctgacttattcttggagcgcttagctttccctgacctttggcttcac
cctctgataccaactgattatattaaaaacttaccaatgtggcgatttaaatgtcttgga
gtccagtctgaagaggaaatgtcggaggggtctcaagatactgaaaatgactcggaaagt
gagaacacagacactttgagtagtgagaaggaagtatttgaagataagcaaagcgtactt
cacaattctccaggaacagcaagtcactgtgatgctgaggcttgttcatgtgccaataaa
tattgtcagaccagcccatgtgaaaggaaggggaggtcatatggatcatataacactaat
gaagatatggaacctgattggttaacttggcctgctgatatgctgcactgtactgaatgt
gttgtttgcctagagaattttgaaaatggatgtttgctaatggggttgccttgtggtcat
gtgtttcatcagaattgcattgtgatgtggttggctgggggccgacattgttgccctgtt
tgccggtggccttcttataaaaaaaagcagccatatgcacaacaccagcccttgtcaaat
gatgtcccatcttaa

>gi568815596r:86503846_86722866|GENSCAN_predicted_peptide_3|1066_aa
MVKGSIQQEELTILNMYAPNTGAPRFIKQVLSDLQRDLDSHTLIMGDFNTPLSTLDRSTR
QKVNKDTQELNSALHQADLIDIYRTLHPKSAEYTFFSAPHHTYSKIDHIVGSKALLSKCK
RTEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLNDYWVHNEMKAEIKMFFETNE
NKDTTYQNLWDAFKAVCRGKFIALNAYKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQ
EITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQIDTIKNDKG
DITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPITGSEI
VAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKRFQSIEKEGILPNSFYEASIILIP
KPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRK
SINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAIYDKPT
ANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLS
LFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELP
FTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAIL
PKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLY
YKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWE
NWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGVGKDFMSKT
PKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTTWEKIFATYSSDKGLISRIYNELK
QIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRYHLTPVR
MAIIKKSGNNSIDYARLIGFGFSEHQEISGESNSETLLPSMYSPST

>gi568815596r:86503846_86722866|GENSCAN_predicted_CDS_3|3201_bp
atggtaaagggatcaattcaacaagaggagctaactatcctaaatatgtatgcacccaat
acaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcc
cacacattaataatgggagactttaacaccccactgtcaacattagacagatcaacgaga
cagaaagtcaacaaggatacccaggaattgaactcagctctgcaccaagcagacctaata
gacatctacagaactctccaccccaaatcagcagaatatacatttttttcagcaccacac
cacacctattccaaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaa
agaacagaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcagg
attaagaatctcactcaaagccgctcaactacatggaaactgaacaacctgctcctgaat
gactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgag
aacaaagataccacataccagaatctctgggacgcattcaaagcagtgtgtagagggaaa
tttatagcactaaatgcctacaagagaaagcaggaaagatccaaaattgacaccctaaca
tcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaa
atcaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagaccgctagca
agactaataaagaaaaaaagagagaagaatcaaatagacacaataaaaaatgataaaggg
gatatcaccaccgatcccacagaaatacaaactaccatcagagaatactacaaacacctc
tacgcaaataaactagaaaatctagaagaaatggatacattcctcgacacatacactctc
ccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaatt
gtggcaataatcaatagtttaccaaccaaaaagagtccaggaccagatggattcacagcc
gaattctaccagaggtacaaggaggaactggtaccattccttctgaaacgattccaatca
atagaaaaagagggaatcctccctaactcattttatgaggccagcatcattctgatacca
aagccgggcagagacacaaccaaaaaagagaattttagaccaatatccttgatgaacatt
gatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagctt
atccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaatatacgcaaa
tcaataaatgtaatccagcatataaacagagccaaagacaaaaaccacatgattatctca
atagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaat
aaattaggtattgatgggacgtatttcaaaataataagagctatctatgacaaacccaca
gccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggcacaaga
cagggatgccctctctcaccgctcctattcaacatagtgttggaagttctggccagggca
atcaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtcc
ctgtttgcagacgacatgattgtttatctagaaaaccccatcgtctcagcccaaaatctc
cttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatca
caagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactccca
ttcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaag
gacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggacacaaacaaa
tggaagaacattccatgctcgtgggtaggaagaatcaatatcgtgaaaatggccatactg
cccaaggtaatttacagattcaatgccatccccatcaagctaccaatgactttcttcaca
gaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccgcatcgccaag
tcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatac
tacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaa
tggaacagaacagagccctcagaaataatgccgcatatctacaactatctgatctttgac
aaacctgagaaaaacaagcaatggggaaaggattccctgtttaataaatggtgctgggaa
aactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaa
atcaattcaagatggattaaagatttaaacgttagacctaaaaccataaaaaccctagaa
gaaaacctaggcattaccattcaggacataggcgtgggcaaggacttcatgtccaaaaca
ccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactcaagagc
ttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaacatgggagaaa
attttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaa
caaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaaggacatgaacaga
cacttctcaaaagaagacatttatgcagccaaaaaacacatgaagaaatgctcatcatca
ctggccatcagagaaatgcaaatcaaaaccactatgagatatcatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacagcatagattatgctcgcctcatcggattt
ggcttttctgaacaccaggaaatttctggagaaagtaattcagaaacattactcccttcc
atgtactcgccaagtacttga

>gi568815596r:86503846_86722866|GENSCAN_predicted_peptide_4|338_aa
MGKKQNRKTGNSKTQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELREDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELCEECRSLRSRCDQLEERVSA
MEDEMNEMKQEGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDVENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRMPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGQV
TLKGKPIRLTADLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFIDK
QMLRDFVTTRPALKELLKEALNMERNNRYQPLQNHAKM

>gi568815596r:86503846_86722866|GENSCAN_predicted_CDS_4|1017_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaacgcagagtgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacagaacaaagctggatggagaatgattttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
tgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagca
atggaagatgaaatgaatgaaatgaagcaagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatgtggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcaggtt
accctcaaaggaaagcccatcagactaacagcggatctctcggcagaaaccctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttatagacaag
caaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagcg
ctaaacatggaaaggaacaaccggtaccagccgctgcaaaatcatgccaaaatgtaa

>gi568815596r:86503846_86722866|GENSCAN_predicted_peptide_5|231_aa
MFFETNENKDTMYQSLWDTFKAVCRGKFIAPNAHKRNQERSKIDTLTSQLKELEKQEQTN
SKASRRQEITNIRAELKEIETQKTLQKINESRSWFFERSDKIDRPLARLIKKKREKTQVD
AIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFMDTYPLPRLNQEEVESLNR
PITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEKLVSFLLKLFQSIEKE

>gi568815596r:86503846_86722866|GENSCAN_predicted_CDS_5|696_bp
atgttctttgaaaccaatgagaacaaagacacaatgtaccagagtctctgggacacattt
aaagcagtgtgtagagggaaatttatagcaccaaatgcccacaagagaaaccaggaaaga
tctaaaatcgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacaaat
tcaaaagctagcagaagacaagaaataactaatatcagagcagaactgaaggagatagag
acacaaaaaacccttcaaaaaatcaatgaatccaggagctggttttttgaaaggagtgac
aaaattgatcgaccattagcaagactaataaagaagaaaagagagaagactcaagtagat
gcaataaaaaatgataaaggggatatcaccactgatcctacagaaatacaaactaccatc
agagaatactacaaacacctctatgcaaataaactagaaaatctagaagaaatggataaa
ttcatggacacatacccccttccaagactaaaccaggaagaagttgaatctctgaataga
ccaataacaggatctgaaattgaggcaataattaatagcctaccaaccaaaaaaagtcca
ggaccagatggattcacagctgaattttaccagaggtacaaagagaagctggtgtcattc
cttctgaaactattccaatcaatagaaaaagagtga

>gi568815596r:86503846_86722866|GENSCAN_predicted_peptide_6|268_aa
MALEITTSAIRQEKEVKGIQTEKEEVKLLLFEDNMIITENSKEFAKQFSFLRSSSFIQSR
SNCHKRRLSSFVQSRSDCYILGALVGSHSEYQRKKIHASGRRKEKVILKYARAFNDKEKI
LGRARGEKYLTYRRTKVKPIWAESRKEEPTAEKEGEDLDRGERQPAGPNGCLGKGEGTPG
PLASRAARLGNEEQDAASVGPGPNGCGHLGAEEPSAAASGMDQCVTVERELEKVLHKFSG
YGQLCERGLEELIDYTGGLKHEILQSHX

>gi568815596r:86503846_86722866|GENSCAN_predicted_CDS_6|804_bp
atggcactggagattacaaccagtgcaatcagacaagaaaaagaagtaaagggcatccag
actgaaaaggaagaagtaaaattgttattatttgaagacaacatgatcattacggaaaat
tcaaaggaatttgcaaaacagttttcatttctgcgttcgtcctctttcattcagtcccgt
agtaactgtcacaagcggcgtttgtcctcctttgttcagtctcgtagtgactgttacata
ttaggagctttggtaggttctcacagtgaatatcagagaaaaaaaatccatgcttctgga
aggagaaaggaaaaagttattttgaaatatgccagagcattcaatgataaagaaaaaatt
cttggaagagccagaggagaaaagtaccttacctatagaagaacaaaggtcaaacccatt
tgggctgaaagtagaaaggaagaacctactgcagagaaagagggggaagatctggacagg
ggtgagaggcagcccgcaggccccaacggctgtcttggaaagggagaagggactcctggt
cctttggcctcccgcgccgcccgcttggggaacgaggagcaggacgcggcctcggtgggg
cccgggccgaacggctgcggacacctgggcgccgaggagccgagcgccgccgcctccggc
atggatcagtgcgtgacggtggagcgcgagctggagaaggtgctgcacaagttctcaggc
tacgggcagctgtgcgagcgcggcctggaggagctcatcgactacaccggcggcctcaag
cacgagatcctgcagagccacgnn