GENSCAN 1.0	Date run:  5-Nov-116	Time: 23:10:34

Sequence gi568815596r:70731053_70935776 : 204724 bp : 45.57% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -  20215  20058  158  0  2   86  100   107 0.341  11.35
 1.06 Intr -  36417  36278  140  0  2   31   68    92 0.007   0.76
 1.05 Intr -  42316  42247   70  0  1   76   74    28 0.003  -0.62
 1.04 Intr -  46619  46585   35  2  2   98   96    20 0.013   0.82
 1.03 Intr -  48361  48326   36  1  0   92   98    33 0.026   3.16
 1.02 Intr -  56749  56597  153  1  0  121   98     6 0.784   5.17
 1.01 Init -  59586  59356  231  0  0   85   76   481 0.979  42.86
 1.00 Prom -  62643  62604   40                              -4.06

 2.00 Prom +  66275  66314   40                              -7.46
 2.01 Init +  71749  71751    3  0  0  108   81     0 0.744   1.30
 2.02 Term +  72072  72374  303  2  0   10   45   344 0.758  17.47
 2.03 PlyA +  73165  73170    6                               1.05

 3.07 PlyA -  73501  73496    6                               1.05
 3.06 Term -  78042  77877  166  2  1  -77   55   226 0.725   0.19
 3.05 Intr -  78805  78687  119  1  2   99   75    89 0.773   7.96
 3.04 Intr -  81546  81395  152  1  2  100   71    56 0.730   4.98
 3.03 Intr -  86060  84942 1119  0  0  118  106   760 0.600  70.42
 3.02 Intr -  88839  88723  117  1  0  102   94    30 0.877   5.44
 3.01 Init -  89471  89411   61  2  1   94  100    48 0.931   8.01
 3.00 Prom -  96866  96827   40                              -4.76

 4.08 PlyA -  96903  96898    6                               1.05
 4.07 Term -  97231  97163   69  1  0  112   44    55 0.316   1.44
 4.06 Intr - 100767 100654  114  0  0   97   37    56 0.280   2.04
 4.05 Intr - 101999 101848  152  0  2  110  109    55 0.995   9.68
 4.04 Intr - 102968 102594  375  0  0  123  106   441 0.995  44.39
 4.03 Intr - 104555 104439  117  0  0   98   78   102 0.999  10.64
 4.02 Intr - 104792 104738   55  2  1  107   84    33 0.940   3.35
 4.01 Init - 118407 118405    3  0  0  108   81     0 0.003   1.30
 4.00 Prom - 121553 121514   40                              -4.96

 5.00 Prom + 127801 127840   40                              -1.56
 5.01 Init + 134846 134848    3  1  0   92  101     0 0.066   1.70
 5.02 Intr + 140537 140604   68  1  2   71   87    66 0.077   2.50
 5.03 Term + 148802 149399  598  2  1   44   48   206 0.249   6.20
 5.04 PlyA + 149790 149795    6                               1.05

 6.00 Prom + 150554 150593   40                              -2.96
 6.01 Init + 165417 165514   98  2  2   54   79   130 0.883   8.48
 6.02 Intr + 168647 168884  238  2  1  113  100   177 0.991  19.02
 6.03 Intr + 169115 169216  102  1  0   55  105    61 0.924   4.87
 6.04 Intr + 169531 169816  286  0  1  -23   94   267 0.532  13.11
 6.05 Intr + 174659 174820  162  0  0   32  107    42 0.111   0.45
 6.06 Intr + 190046 190233  188  0  2   91  110   342 0.454  36.11
 6.07 Term + 201715 202152  438  0  0   99   47   424 0.969  34.68
 6.08 PlyA + 202364 202369    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  49876  49957   82  0  1   90   86   113 0.933  12.43
S.002 Sngl + 112148 112486  339  1  0   87   37   181 0.876   8.93


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:70731053_70935776|GENSCAN_predicted_peptide_1|275_aa
MDPAPGVLDPRAAPPALLGTPQAEVLEDVLREQFGPLPQLAAVCRLKRLPSGGYSSTENL
QLVLERRRVANAKERERIKNLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVLSDL
LEGAKDSKVVALYDGKTSTTDRFPEVELLSHRTFQGIGSGIISFECGIVMELGLGRCEAG
LAGLGASPGASRSLAARRSAAVAGRAGAASAAAYIEIGATGTFLSNKRQLLYTETFPLEF
QSVKVEGIKQIFQSNLFIIEIRHMKLRKDKALIQX

>gi568815596r:70731053_70935776|GENSCAN_predicted_CDS_1|825_bp
atggaccccgcgcccggcgtcctagatccccgcgccgcgccgcccgcgctcctgggcacc
ccgcaagccgaggtgctggaggacgtgttgcgggagcagttcgggccgctgccccagctg
gccgctgtctgccggctcaagcggctgccctcgggcggctactcgtccactgaaaacctc
cagttggtgctggagcggcggcgtgtggccaacgccaaggagcgtgagcggataaaaaat
ctcaaccgtggttttgccagattgaaggcacttgtgccatttcttccccaaagcaggaag
cccagcaaagttgatatccttaaaggtgcgactgaatatatacaggttctcagtgatctt
ttggaaggagccaaagactcaaaggtagtggctctatacgatggtaaaacttctaccaca
gatagattcccagaagtagaactgctgagtcacagaacttttcaaggcattggcagtggg
attatttcttttgaatgtggcattgtaatggaactgggtctcgggcggtgcgaggcgggc
ttggcggggctgggcgcgtcccccggggcctcgcgatcgctggctgcgcggcgctcagcc
gcagtggccggccgagcaggtgcggcgtcggcagccgcctacattgagatcggggcaacc
ggcacgtttctgagtaacaagcgtcaactgttatatactgaaacattccctctggaattc
cagagtgtcaaagtggaagggatcaaacagatcttccagtccaacctcttcattatagaa
atcagacacatgaagctgagaaaagataaggcactgatccaagnn

>gi568815596r:70731053_70935776|GENSCAN_predicted_peptide_2|101_aa
MHLSPTAVTAATLPKRKTEGDVKGDKAKVDTPQRRSTRLSAKPAPPKPEPKPKKAPAKKG
EKVPKGKKGKADAGKEGNYPAEKGDAITDQAREAEGDGEAK

>gi568815596r:70731053_70935776|GENSCAN_predicted_CDS_2|306_bp
atgcatctaagtcccactgctgtcaccgccgccaccttgcccaagaggaagaccgaaggg
gatgttaaaggagataaagccaaggtggacacacctcagagaagatccacaaggttgtct
gctaaacctgctcctccaaagccagagcccaagcctaaaaaggcccctgcaaagaaggga
gagaaggtacctaaagggaaaaagggaaaagctgatgctggcaaggaggggaattaccct
gcagaaaaaggagatgccataacagaccaggccagggaagctgaaggtgatggagaggcc
aagtga

>gi568815596r:70731053_70935776|GENSCAN_predicted_peptide_3|577_aa
MDGEAVRFCTDNQCVSLHPQEVDSVAMAPAAPKIPRLVQATPAFMAVTLVFSLVTLFVVD
HHHFGREAEMRELIQTFKGHMENSSAWVVEIQMLKCRVDNVNSQLQVLGDHLGNTNADIQ
MVKGVLKDATTLSLQTQMLRSSLEGTNAEIQRLKEDLEKADALTFQTLNFLKSSLENTSI
ELHVLSRGLENANSEIQMLNASLETANTQAQLANSSLKNANAEIYVLRGHLDSVNDLRTQ
NQVLRNSLEGANAEIQGLKENLQNTNALNSQTQAFIKSSFDNTSAEIQFLRGHLERAGDE
IHVLKRDLKMVTAQTQKANGRLDQTDTQIQVFKSEMENVNTLNAQIQVLNGHMKNASREI
QTLKQGMKNASALTSQTQMLDSNLQKASAEIQRLRGDLENTKALTMEIQQEQSRLKTLHV
VITSQEQLQRTQSQLLQMVLQGWKFNGGSLYYFSSVKKSWHEAEQFCVSQGAHLASVASK
EEQAFLVEFTSKVYYWIGLTDRGTEGSWRWTDGTPFNAAQNKAPVVFGFWEKNQSDNWRH
KNGQTEDCVQIQQKWNDMTCDTPYQWVCKKPMGQGVA

>gi568815596r:70731053_70935776|GENSCAN_predicted_CDS_3|1734_bp
atggacggtgaggcagtccgcttctgcacagataaccagtgtgtctccctgcacccccaa
gaggtggactctgtggcaatggctcctgcagcccccaagataccgaggctcgttcaggct
accccggcatttatggctgtgaccttggtcttctctcttgtgactctctttgtagtggat
catcaccactttggcagggaggcagaaatgcgagagcttatccagacatttaaaggccac
atggagaattccagtgcctgggtagtagaaatccagatgttgaagtgcagagtggacaat
gtcaattcgcagctccaggtgctcggtgatcatctgggaaacaccaatgctgacatccag
atggtaaaaggagttctaaaggatgccactacattgagtttgcagacacagatgttaagg
agttccctggagggaaccaatgctgagatccagaggctcaaggaagaccttgaaaaggca
gatgctttaactttccagacgctgaatttcttaaaaagcagtttagaaaacaccagcatt
gagctccacgtgctaagcagaggcttagaaaatgcaaactctgaaattcagatgttgaat
gccagtttggaaacggcaaatacccaggctcagttagccaatagcagtttaaagaacgct
aatgctgagatctatgttttgagaggccatctagatagtgtcaatgacttgaggacccag
aaccaggttttaagaaatagtttggaaggagccaatgctgagatccagggactaaaggaa
aatttgcagaacacaaatgctttaaactcccagacccaggcctttataaaaagcagtttt
gacaacactagtgctgagatccagttcttaagaggtcatttggaaagagctggtgatgaa
attcacgtgttaaaaagggatttgaaaatggtcacagcccagacccaaaaagcaaatggc
cgtctggaccagacagatactcagattcaggtattcaagtcagagatggaaaatgtgaat
accttaaatgcccagattcaggtcttaaatggtcatatgaaaaatgccagcagagagata
cagaccctaaaacaaggaatgaagaatgcttcagccttaacttcccagacccagatgtta
gacagcaatctgcagaaggccagtgccgagatccagaggttaagaggggatctagagaac
accaaagctctaaccatggaaatccagcaggagcagagtcgcctgaagaccctccatgtg
gtcattacttcacaggaacagctacaaagaacccaaagtcagcttctccagatggtcctg
caaggctggaagttcaatggtggaagcttatattatttttctagtgtcaagaagtcttgg
catgaggctgagcagttctgcgtgtcccagggagcccatctggcatctgtggcctccaag
gaggagcaggcatttctggtagagttcacaagtaaagtgtactactggatcggtctcact
gacaggggcacagagggctcctggcgctggacagatgggacaccattcaacgccgcccag
aacaaagcccctgttgtcttcgggttttgggaaaagaatcagtctgacaactggcggcac
aagaatgggcagactgaagactgtgtccaaattcagcagaagtggaatgacatgacctgt
gacaccccctatcagtgggtgtgcaagaagcccatgggccagggtgtggcctga

>gi568815596r:70731053_70935776|GENSCAN_predicted_peptide_4|294_aa
MIRALGETGSQKHLCSQDKEPPPKSGPSLVPGKTPTVRAALICLTLVLVASVLLQAVLYP
RFMGTISDVKTNVQLLKGRVDNISTLDSEIKKNSDGMEAAGVQIQMVNESLGYVRSQFLK
LKTSVEKANAQIQILTRSWEEVSTLNAQIPELKSDLEKASALNTKIRALQGSLENMSKLL
KRQNDILQVVSQGWKYFKGNFYYFSLIPKTWYSAEQFCVSRNSHLTSVTSESEQEFLYKT
AGGLIYWIGLTKAGMEGDWSWVDDTPFNKVQSGGRYMGTCPSAGSVASPRKSHH

>gi568815596r:70731053_70935776|GENSCAN_predicted_CDS_4|885_bp
atgataagagcccttggagagacaggcagccagaagcacctgtgctcccaggataaggag
cctcctcccaagtccggtccatctctggtcccggggaaaacacccacagtccgtgctgca
ttaatctgcctgacgctggtcctggtcgcctccgtcctgctgcaggccgtcctttatccc
cggtttatgggcaccatatcagatgtaaagaccaatgtccagttgctgaaaggtcgtgtg
gacaacatcagcaccctggattctgaaattaaaaagaatagtgacggcatggaggcagct
ggcgttcagatccagatggtgaatgagagcctgggttatgtgcgttctcagttcctgaag
ttaaaaaccagtgtggagaaggccaacgcacagatccagatcttaacaagaagttgggaa
gaagtcagtaccttaaatgcccaaatcccagagttaaaaagtgatttggagaaagccagt
gctttaaatacaaagatccgggcactccagggcagcttggagaatatgagcaagttgctc
aaacgacaaaatgatattctacaggtggtttctcaaggctggaagtacttcaaggggaac
ttctattacttttctctcattccaaagacctggtatagtgccgagcagttctgtgtgtcc
aggaattcacacctgacctcggtgacctcagagagtgagcaggagtttctgtataaaaca
gcggggggactcatctactggattggcctgactaaagcagggatggaaggggactggtcc
tgggtggatgacacgccattcaacaaggtccaaagtggaggtcgctacatgggcacctgc
ccttctgctggcagtgtggcctcgcccaggaagtcccaccattga

>gi568815596r:70731053_70935776|GENSCAN_predicted_peptide_5|222_aa
MGAIAHHPGCLRKEVGEERNPSVLCRKAFDKIQQCFMLKTLNKLDVDGTYLKIIRAIYDK
LTANIILNGQKLEAFPLKTGTRQGCPLSPPLFNIVLEVLARAIRQEKEIKGIQLGEEEVK
LSLFADDMIVYLENSIISAQNLLKLINNFTKVSGYKINVQKPQAFLYTINRQTESQIMSE
LPFTIAAKRIKFLGIQLTRDVKDLFKENYKPQLNEIKEDTNK

>gi568815596r:70731053_70935776|GENSCAN_predicted_CDS_5|669_bp
atgggagccatagcccaccacccggggtgcctgcgcaaggaagtcggcgaagagcgaaac
ccctcggtgctatgcagaaaggcctttgacaaaattcaacagtgcttcatgctaaaaact
ctcaataaactagatgttgatggaacatatctcaaaataataagagctatttatgacaaa
ctcacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaacaggc
acaagacaaggatgccctctctcaccacccctattcaacatagtgttggaagttctggcc
agggcaattaggcaagagaaagaaataaagggtattcaattaggagaagaggaagtcaaa
ttgtccctgtttgcagatgacatgattgtatatttagaaaactccatcatctcagcccaa
aatctccttaagctgataaacaacttcaccaaagtctcaggatacaaaatcaatgtgcaa
aaaccacaggcattcctctacaccattaacagacaaacagagagccaaatcatgagtgaa
ctcccattcacaattgctgcaaagagaataaaattcctaggaatccaacttacaagggat
gtgaaggacctcttcaaggagaactacaaaccacagctcaatgaaataaaagaggacaca
aacaaatga

>gi568815596r:70731053_70935776|GENSCAN_predicted_peptide_6|503_aa
MLDTGSEHLNRILKALPALQSAGSEGQNGSAESLGEGGTRDSDRARRKLRGGNKEIPTFY
PCLVVRSPVTASDLRGTQDFAAYHGLSLILEPLGACNRLSVCVPVHSPPGMRVSPRSPSL
RTLVIDPAEPAGAQRLRFSGKERSGEAGSAVEGLAVAVSMGDGGAERDRGPARRAESGGG
GGRCGDRSGAGDLRADGGGHSPTEVAGTSASSPAGSRESGADSDGQPGPGEADHCRRILV
RGSFWGVRGARRPNPLEARTRSGYLGLQEREEMAVACTRSQSKPPGSSLPLLRSTDAKGT
IREIVLPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVK
VWFQNRRTKQKKDQSRDLEKRASSSASEAFATSNILRLLEQGRLLSVPRAPSLLALTPSL
PGLPASHRGTSLGDPRNSSPRLNPLSSASASPPLPPPLPAVCFSSAPLLDLPAGYELGSS
AFEPYSWLERKVGSASSCKKANT

>gi568815596r:70731053_70935776|GENSCAN_predicted_CDS_6|1512_bp
atgctggacacaggttctgagcacctgaaccggatactgaaggctctgccagccctccag
agcgctggcagtgaaggacagaacggctccgcagaaagcctcggagaaggcgggacccgg
gacagcgacagagcacggagaaagctccgcgggggaaacaaggaaatccccaccttctat
ccctgtctcgtggtgcggtcccctgtgacggcctcagacctgcggggaacccaggacttt
gccgcctaccacggtctcagccttattctcgagcctctgggcgcctgcaaccggctgtct
gtctgtgtgcctgttcactctcccccggggatgcgggtctctccgaggtcgccttctttg
cgcactttggttattgatcctgctgaaccggccggagcgcagcggctgcgcttctctggg
aaagaacggagtggggaggctggctccgccgtagaggggttggcagtggcggtcagcatg
ggcgatgggggcgccgagcgcgaccggggccccgcgcgccgggcggagtctggtggcggc
ggtgggcgctgcggagaccgcagcggagcgggggacttgcgagctgatggcggtggccac
agcccaacggaggtggccgggacctcagcctccagtcccgcaggctccagggagagtgga
gccgacagcgacgggcagcccgggcccggcgaggcagaccactgccgccgcatactggtg
cgaggtagcttctggggagtccgaggggcaaggaggccaaatcctttggaagcccggaca
aggagtgggtacctggggctacaggaaagggaggagatggcagtggcatgcacccgcagt
cagtcaaagccaccgggctcaagtcttcctcttttgcgcagcaccgatgccaaagggaca
attcgggaaattgtcctgcctaagggcctggacctggaccggcccaagcggacacgtaca
tccttcactgccgagcagctgtaccgcctggagatggagttccagcgctgccagtatgtg
gtgggccgcgagcgcactgagctggcccgccagctgaacctctccgagacccaggtgaag
gtctggttccagaaccgccgcaccaagcagaagaaagaccagagcagagacctggagaag
cgggcgtcctcctcagcctccgaggcctttgccacctccaacattctgcggctgctggag
cagggccggctgctctctgtgcccagggcccctagcctcctggcgctgacccctagcctg
ccaggcctacctgccagccacaggggcacctccttaggtgaccccaggaactcctcccca
cgcctcaacccgctgtcctcggcctcagcgtcccccccactgccgccccctctgccagct
gtctgcttttcctcggccccgctcctggatctgcctgccggctacgaactgggttcctcg
gccttcgagccatacagctggctagaacggaaagtgggcagcgccagcagctgcaagaaa
gctaacacttaa